BLASTX nr result

ID: Ophiopogon24_contig00020159 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00020159
         (398 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020277295.1| formin-like protein 3 [Asparagus officinalis...    70   3e-11

>ref|XP_020277295.1| formin-like protein 3 [Asparagus officinalis]
 gb|ONK61099.1| uncharacterized protein A4U43_C08F26240 [Asparagus officinalis]
          Length = 883

 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 39/59 (66%), Positives = 46/59 (77%)
 Frame = -1

Query: 179 MAGKLIKGTTDMRKIVLLFVLMISVLDFLPRVSSGRQLVDNSLESTVEQILLNCDLDPT 3
           MAG+LIKG  +MRKIVL F+LMIS    L R +SGRQL D+S E TVE+ILLNC L+PT
Sbjct: 1   MAGELIKGAMNMRKIVLWFILMISASASLLR-ASGRQLTDDSHEMTVEKILLNCGLNPT 58


Top