BLASTX nr result
ID: Ophiopogon24_contig00020055
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00020055
(558 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012070606.1| uncharacterized protein LOC105632772 [Jatrop... 62 5e-08
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 61 1e-07
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar... 61 1e-07
gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus... 61 2e-07
gb|AAC12735.1| putative retrovirus-related polyprotein, partial ... 60 2e-07
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 60 2e-07
gb|PHT32711.1| High mobility group B protein 9 [Capsicum baccatum] 60 4e-07
emb|CDP17739.1| unnamed protein product [Coffea canephora] 59 7e-07
emb|CDP17738.1| unnamed protein product [Coffea canephora] 59 1e-06
gb|OAE29452.1| hypothetical protein AXG93_4548s1300 [Marchantia ... 58 2e-06
gb|KYP59920.1| Retrovirus-related Pol polyprotein from transposo... 57 2e-06
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo... 57 4e-06
emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana] ... 56 7e-06
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro... 56 7e-06
gb|OAE26943.1| hypothetical protein AXG93_4413s1270 [Marchantia ... 56 1e-05
>ref|XP_012070606.1| uncharacterized protein LOC105632772 [Jatropha curcas]
Length = 411
Score = 62.4 bits (150), Expect = 5e-08
Identities = 24/48 (50%), Positives = 39/48 (81%)
Frame = +2
Query: 395 SWHNYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVR 538
S +Y+V+FVD++SR +WV T+K +++ G+F+KWKK+VE QTGR ++
Sbjct: 362 SGKHYYVTFVDDFSRRVWVYTLKSKDEVLGVFLKWKKLVETQTGRHIK 409
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/55 (47%), Positives = 42/55 (76%), Gaps = 3/55 (5%)
Frame = +2
Query: 401 HNYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL---HGGE 556
++Y+V+FVD++SR +WV MK +++ GIF+KWKK +E QTGR+++ +GGE
Sbjct: 284 NHYYVTFVDDFSRRIWVYAMKTKDEVLGIFLKWKKRMETQTGRKIKHFRTDNGGE 338
>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
Length = 1034
Score = 61.2 bits (147), Expect = 1e-07
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +2
Query: 404 NYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL 544
+YFV+FVD+YSR +WV MK +N+ +F+KWKK+VE Q R+V+ L
Sbjct: 349 HYFVTFVDDYSRKVWVYLMKRKNEVLDVFLKWKKMVETQADRKVKRL 395
>gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis]
Length = 631
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/54 (50%), Positives = 41/54 (75%), Gaps = 3/54 (5%)
Frame = +2
Query: 404 NYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL---HGGE 556
++FV+FVD+YSR WV TM +++ IF++WKK +ELQTGR+++ L +GGE
Sbjct: 450 HWFVTFVDDYSRHCWVYTMTKKSEVLDIFVEWKKRLELQTGRKIKTLRSDNGGE 503
>gb|AAC12735.1| putative retrovirus-related polyprotein, partial [Lithospermum
erythrorhizon]
Length = 244
Score = 59.7 bits (143), Expect = 2e-07
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = +2
Query: 386 ESGSWHNYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVR 538
+ GSW YFV+FVD+YSR+ W+ +KH+N+ IF +W+ +VE +TGR+++
Sbjct: 183 KDGSW--YFVTFVDDYSRYAWIYFLKHKNEVFDIFKQWRAMVENRTGRKLK 231
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 3/54 (5%)
Frame = +2
Query: 404 NYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL---HGGE 556
+YFV+FVD++SR +WV TMK++N IF+KWK VE TGR+++ L +GGE
Sbjct: 436 HYFVTFVDDFSRRVWVFTMKNKNDVLEIFLKWKAEVENHTGRKIKVLQTDNGGE 489
>gb|PHT32711.1| High mobility group B protein 9 [Capsicum baccatum]
Length = 483
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/47 (53%), Positives = 38/47 (80%)
Frame = +2
Query: 404 NYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL 544
+YFV+FVD++SR +WV TMK++++ GIF+KWK VE QT R+++ L
Sbjct: 437 HYFVTFVDDFSRRVWVFTMKNKDEVLGIFLKWKAQVENQTERKIKVL 483
>emb|CDP17739.1| unnamed protein product [Coffea canephora]
Length = 435
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
Frame = +2
Query: 407 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL---HGGE 556
YFV+F+D++SR +WV TMK +++ IF+KWK VE QTGR+++ L +GGE
Sbjct: 131 YFVTFIDDFSRRVWVFTMKSKDEVLEIFLKWKARVENQTGRKIKILRTDNGGE 183
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 58.5 bits (140), Expect = 1e-06
Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
Frame = +2
Query: 407 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL---HGGE 556
YFV+F+D++SR +WV TMK +++ IF+KWK VE QTGR+++ L +GGE
Sbjct: 523 YFVTFIDDFSRRVWVFTMKSKDEMLKIFLKWKARVENQTGRKIKILRTDNGGE 575
>gb|OAE29452.1| hypothetical protein AXG93_4548s1300 [Marchantia polymorpha subsp.
ruderalis]
Length = 345
Score = 57.8 bits (138), Expect = 2e-06
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Frame = +2
Query: 275 IDDLEACVVCTLGLAD----------IWSVV-CVTSESFHVFASRDLLESGSWHNYFVSF 421
+DDLE C C G A W ++ V S+ + + + L G W Y++ F
Sbjct: 109 LDDLEFCENCIHGKATKVKFTQSVDVTWDMLNYVHSDLWRLLRTPTL--GGGW--YYIMF 164
Query: 422 VDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL 544
+D+ SR +WV +KH+++ G F +WKK+VE++ GR +++L
Sbjct: 165 IDDCSRKVWVYNLKHKDEVFGKFKEWKKMVEVRIGRNIKKL 205
>gb|KYP59920.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 259
Score = 57.0 bits (136), Expect = 2e-06
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +2
Query: 407 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL 544
YF+S +D+YSR W+ MKH+NQ F +WK +VE QTG+R++ L
Sbjct: 76 YFLSIIDDYSRMTWIFIMKHKNQAFKYFKEWKILVENQTGKRIKRL 121
>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 593
Score = 57.0 bits (136), Expect = 4e-06
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +2
Query: 407 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL 544
YF+S +D+YSR W+ MKH+NQ F +WK +VE QTG+R++ L
Sbjct: 478 YFLSIIDDYSRMTWIFIMKHKNQAFKYFKEWKILVENQTGKRIKRL 523
>emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana]
emb|CAB78169.1| putative retrotransposon [Arabidopsis thaliana]
Length = 1230
Score = 56.2 bits (134), Expect = 7e-06
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Frame = +2
Query: 275 IDDLEACVVCTLGLADIWSVVCVT--SESFHVFASRDLLESGSWH------NYFVSFVDE 430
+ LE C C G A S V T +E + DL + S YF+SF+D
Sbjct: 451 VSKLELCEDCIYGKARRLSFVVATHNTEDKLNYVHSDLWGAPSVPLSLGKCQYFISFIDV 510
Query: 431 YSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL 544
YSR WV +KH+++ G F +W +VE QTGR+++ L
Sbjct: 511 YSRKTWVYFLKHKDEAFGTFAEWSVMVENQTGRKIKIL 548
>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
Length = 1309
Score = 56.2 bits (134), Expect = 7e-06
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Frame = +2
Query: 275 IDDLEACVVCTLGLADIWSVVCVTSESFHVFASRDLLESGSWH----------NYFVSFV 424
+DDL C C LG S V S D + S W Y++S +
Sbjct: 441 VDDLSFCDECVLGKC---SRVRFKRSSTQSKGILDYVHSDLWGPSRVASRGGARYYISVI 497
Query: 425 DEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL 544
D+YSR +WV T+K +++ F WK +VE QTG+++++L
Sbjct: 498 DDYSRKLWVVTLKSKDEAFKAFKDWKMMVETQTGKKIKKL 537
>gb|OAE26943.1| hypothetical protein AXG93_4413s1270 [Marchantia polymorpha subsp.
ruderalis]
Length = 922
Score = 55.8 bits (133), Expect = 1e-05
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = +2
Query: 389 SGSWHNYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL---HGGE 556
SG W Y+VSF+D+YSR++WV + H+++ F W+ VE QTG +V+ L +GGE
Sbjct: 163 SGKW--YYVSFIDDYSRYVWVYFLTHKSEVFSTFKSWRIQVETQTGHKVKYLRSDNGGE 219