BLASTX nr result

ID: Ophiopogon24_contig00020025 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00020025
         (428 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266939.1| PREDICTED: F-box protein SKIP23-like [Nelumb...    55   4e-06

>ref|XP_010266939.1| PREDICTED: F-box protein SKIP23-like [Nelumbo nucifera]
          Length = 388

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = -2

Query: 427 FFSISDKRIYKLRLPRGTQEKTYHGSPYGWLLTVNSDDRKQRVSLLNPITKAQVLLPPLT 248
           FFS+SD +I+ L LP  ++ +   GS  GWL+ V   +    + LLNP+T+AQ+ LPPLT
Sbjct: 68  FFSLSDDKIHWLELPEASRRRRCCGSSQGWLVVV---EESPVIRLLNPLTRAQIQLPPLT 124


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