BLASTX nr result

ID: Ophiopogon24_contig00019827 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00019827
         (491 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK66212.1| uncharacterized protein A4U43_C06F5390 [Asparagus...   110   4e-25
ref|XP_020269665.1| chromatin structure-remodeling complex prote...   110   4e-25

>gb|ONK66212.1| uncharacterized protein A4U43_C06F5390 [Asparagus officinalis]
          Length = 1357

 Score =  110 bits (276), Expect = 4e-25
 Identities = 72/166 (43%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
 Frame = +2

Query: 2    IQEEPSKLATRANIGSNPTCLKEFSAEPVTGNDGQDG-CDSTTIKQDDNGRDSSGGLCTK 178
            IQEE S+  T++ IG  PTC  E S  P   N  +DG C    +KQD N   ++ G+  K
Sbjct: 911  IQEESSRTKTQSTIGGKPTCSTELSGGPAMSNACEDGTCQEPILKQDGNSNSAAAGVSIK 970

Query: 179  QDDNRGDSTNAGVSINEDDNGGDSTGIGVSIKQDDNGHDSSGAGVSIASSLANNLAGRVV 358
            QDDN G ST+ GVSI  DDN          IK       ++G  VS+ASSLA ++  RV 
Sbjct: 971  QDDNCGASTSTGVSIKRDDN----------IK-------TTGGEVSVASSLAFSVTDRVS 1013

Query: 359  GKAEEI-MIFGESPVATEIMGKSSIPTCP-SECPTDTTGCSKSKSS 490
             K EE+  I  E P+ TEI+ KS IPTC  ++   D   C+KSKSS
Sbjct: 1014 EKLEEVDKISDEDPMETEIVEKSPIPTCQNTDHLNDIMECNKSKSS 1059


>ref|XP_020269665.1| chromatin structure-remodeling complex protein SYD [Asparagus
            officinalis]
          Length = 3302

 Score =  110 bits (276), Expect = 4e-25
 Identities = 72/166 (43%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
 Frame = +2

Query: 2    IQEEPSKLATRANIGSNPTCLKEFSAEPVTGNDGQDG-CDSTTIKQDDNGRDSSGGLCTK 178
            IQEE S+  T++ IG  PTC  E S  P   N  +DG C    +KQD N   ++ G+  K
Sbjct: 2351 IQEESSRTKTQSTIGGKPTCSTELSGGPAMSNACEDGTCQEPILKQDGNSNSAAAGVSIK 2410

Query: 179  QDDNRGDSTNAGVSINEDDNGGDSTGIGVSIKQDDNGHDSSGAGVSIASSLANNLAGRVV 358
            QDDN G ST+ GVSI  DDN          IK       ++G  VS+ASSLA ++  RV 
Sbjct: 2411 QDDNCGASTSTGVSIKRDDN----------IK-------TTGGEVSVASSLAFSVTDRVS 2453

Query: 359  GKAEEI-MIFGESPVATEIMGKSSIPTCP-SECPTDTTGCSKSKSS 490
             K EE+  I  E P+ TEI+ KS IPTC  ++   D   C+KSKSS
Sbjct: 2454 EKLEEVDKISDEDPMETEIVEKSPIPTCQNTDHLNDIMECNKSKSS 2499


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