BLASTX nr result

ID: Ophiopogon24_contig00019826 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00019826
         (487 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK66212.1| uncharacterized protein A4U43_C06F5390 [Asparagus...   111   3e-25
ref|XP_020269665.1| chromatin structure-remodeling complex prote...   111   3e-25

>gb|ONK66212.1| uncharacterized protein A4U43_C06F5390 [Asparagus officinalis]
          Length = 1357

 Score =  111 bits (277), Expect = 3e-25
 Identities = 72/165 (43%), Positives = 92/165 (55%), Gaps = 3/165 (1%)
 Frame = +1

Query: 1    QEEPSKVVTRANIGSNPTCLKEFSAEPVTGNDGQDG-CDSTTIKQDDNVRDSSGGLCTKQ 177
            QEE S+  T++ IG  PTC  E S  P   N  +DG C    +KQD N   ++ G+  KQ
Sbjct: 912  QEESSRTKTQSTIGGKPTCSTELSGGPAMSNACEDGTCQEPILKQDGNSNSAAAGVSIKQ 971

Query: 178  DDNRGDSTNAGVSINEDDNGGDSTGIGVSIKQDDNGHDSSGAGVSIASSLANNLAGRVVE 357
            DDN G ST+ GVSI  DDN          IK       ++G  VS+ASSLA ++  RV E
Sbjct: 972  DDNCGASTSTGVSIKRDDN----------IK-------TTGGEVSVASSLAFSVTDRVSE 1014

Query: 358  KAEEI-MIFGESPVATEIMGKSSIPTCP-SECPTDTTGCSKSKSS 486
            K EE+  I  E P+ TEI+ KS IPTC  ++   D   C+KSKSS
Sbjct: 1015 KLEEVDKISDEDPMETEIVEKSPIPTCQNTDHLNDIMECNKSKSS 1059


>ref|XP_020269665.1| chromatin structure-remodeling complex protein SYD [Asparagus
            officinalis]
          Length = 3302

 Score =  111 bits (277), Expect = 3e-25
 Identities = 72/165 (43%), Positives = 92/165 (55%), Gaps = 3/165 (1%)
 Frame = +1

Query: 1    QEEPSKVVTRANIGSNPTCLKEFSAEPVTGNDGQDG-CDSTTIKQDDNVRDSSGGLCTKQ 177
            QEE S+  T++ IG  PTC  E S  P   N  +DG C    +KQD N   ++ G+  KQ
Sbjct: 2352 QEESSRTKTQSTIGGKPTCSTELSGGPAMSNACEDGTCQEPILKQDGNSNSAAAGVSIKQ 2411

Query: 178  DDNRGDSTNAGVSINEDDNGGDSTGIGVSIKQDDNGHDSSGAGVSIASSLANNLAGRVVE 357
            DDN G ST+ GVSI  DDN          IK       ++G  VS+ASSLA ++  RV E
Sbjct: 2412 DDNCGASTSTGVSIKRDDN----------IK-------TTGGEVSVASSLAFSVTDRVSE 2454

Query: 358  KAEEI-MIFGESPVATEIMGKSSIPTCP-SECPTDTTGCSKSKSS 486
            K EE+  I  E P+ TEI+ KS IPTC  ++   D   C+KSKSS
Sbjct: 2455 KLEEVDKISDEDPMETEIVEKSPIPTCQNTDHLNDIMECNKSKSS 2499


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