BLASTX nr result

ID: Ophiopogon24_contig00019536 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00019536
         (372 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020241391.1| homeobox-leucine zipper protein HOX6-like [A...   131   1e-35
ref|XP_020114943.1| homeobox-leucine zipper protein HOX6-like [A...    62   6e-09
ref|XP_009412772.1| PREDICTED: homeobox-leucine zipper protein H...    59   5e-08

>ref|XP_020241391.1| homeobox-leucine zipper protein HOX6-like [Asparagus officinalis]
 gb|ONK58841.1| uncharacterized protein A4U43_C08F290 [Asparagus officinalis]
          Length = 224

 Score =  131 bits (329), Expect = 1e-35
 Identities = 71/124 (57%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
 Frame = -1

Query: 369 LLSSFESXXXXXXXXXXXXXXXXXXLDKPMDERGKESDYSKTDRHQSRPNSLLTDKTDTR 190
           LLS+FES                  L+KPM+ERG ESD  K D+   RPN +LT+KT+ R
Sbjct: 103 LLSNFESLKHEKQLLAKQLQKLAELLEKPMEERGNESDQEKADQ---RPNLMLTEKTEMR 159

Query: 189 TISSDD-EENQYKKYGDKETEDFFSEPPIGGGSLVPSEQQQFCFHQPSWPPDQSCATSQW 13
            +SSDD EEN++ +  +KE +DFFS PP GG SLVPSEQQ FCFHQPSWP DQ+CA SQW
Sbjct: 160 LMSSDDDEENRHTRCSEKE-KDFFSGPPTGG-SLVPSEQQ-FCFHQPSWPTDQACANSQW 216

Query: 12  WEFW 1
           WEFW
Sbjct: 217 WEFW 220


>ref|XP_020114943.1| homeobox-leucine zipper protein HOX6-like [Ananas comosus]
 gb|OAY67743.1| Homeobox-leucine zipper protein HOX6 [Ananas comosus]
          Length = 234

 Score = 62.0 bits (149), Expect = 6e-09
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
 Frame = -1

Query: 369 LLSSFESXXXXXXXXXXXXXXXXXXLDKPMDERGK-ESDYSKTDRH---QSRPNSLLTDK 202
           LL+SF+S                  LDKP + R +   D    D +     RPN  + ++
Sbjct: 104 LLASFDSLKKEKHMLLKQLQKLNGLLDKPQEGRSRCYGDSENADLNGATDKRPNFQMKEE 163

Query: 201 TDTRTIS-SDDEENQYKKYGDKETEDFFSEPPIGGGSLVPSEQQQFCFHQPSWPPDQSCA 25
           +D R +  SD+E+ ++     ++  + ++       +L    + QF F Q SWP DQSC 
Sbjct: 164 SDARVVPYSDEEDKKFPCLISEDEAELYTVQQQACSTLTSEVEDQFGF-QTSWPSDQSCT 222

Query: 24  TSQWWEFW 1
           ++QWWEFW
Sbjct: 223 STQWWEFW 230


>ref|XP_009412772.1| PREDICTED: homeobox-leucine zipper protein HOX6-like [Musa
           acuminata subsp. malaccensis]
          Length = 235

 Score = 59.3 bits (142), Expect = 5e-08
 Identities = 42/129 (32%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
 Frame = -1

Query: 369 LLSSFESXXXXXXXXXXXXXXXXXXLDKPMDERGKESDYSKTDRH------QSRPNSLLT 208
           LLSSF+S                  +DK  +ER    D    DR       QS   SL  
Sbjct: 107 LLSSFDSLKKEKQLLLQQLQDLAELIDKA-EERSNRDDEGSNDRDSEIKKDQSSRLSLKE 165

Query: 207 DKTDTRTISSDDEENQYKKYGDKETEDFFSEPPIGGGSLVPSEQQQFCFHQPSWPPDQSC 28
           +      + + +E+ + + + + E      +P I   SL  S +QQFC    SWP DQSC
Sbjct: 166 EADLEFAVCAAEEDKKPRYFSEDELNLCAGQPAIS--SLTSSAEQQFCL-TTSWPSDQSC 222

Query: 27  ATSQWWEFW 1
             SQWWEFW
Sbjct: 223 NNSQWWEFW 231


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