BLASTX nr result
ID: Ophiopogon24_contig00019489
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00019489
(710 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_022935015.1| DNA topoisomerase 2 isoform X1 [Cucurbita mo... 79 6e-21
ref|XP_023527820.1| DNA topoisomerase 2 isoform X1 [Cucurbita pe... 79 6e-21
ref|XP_022982562.1| DNA topoisomerase 2 isoform X1 [Cucurbita ma... 79 6e-21
ref|XP_022935016.1| DNA topoisomerase 2 isoform X2 [Cucurbita mo... 79 6e-21
ref|XP_023527823.1| DNA topoisomerase 2 isoform X3 [Cucurbita pe... 79 6e-21
ref|XP_022982563.1| DNA topoisomerase 2 isoform X2 [Cucurbita ma... 79 6e-21
ref|XP_023527825.1| DNA topoisomerase 2 isoform X5 [Cucurbita pe... 79 6e-21
ref|XP_023527826.1| DNA topoisomerase 2 isoform X6 [Cucurbita pe... 79 6e-21
gb|OWM78385.1| hypothetical protein CDL15_Pgr016109 [Punica gran... 79 2e-20
gb|KZV36276.1| DNA topoisomerase 2 [Dorcoceras hygrometricum] 77 2e-20
gb|PON74229.1| DNA topoisomerase II-type [Parasponia andersonii] 75 3e-20
gb|PAN07751.1| hypothetical protein PAHAL_A03043 [Panicum hallii] 77 6e-20
ref|XP_016722312.1| PREDICTED: DNA topoisomerase 2 isoform X1 [G... 78 6e-20
ref|XP_012455306.1| PREDICTED: DNA topoisomerase 2 isoform X1 [G... 78 6e-20
ref|XP_016722313.1| PREDICTED: DNA topoisomerase 2 isoform X2 [G... 78 6e-20
ref|XP_012455307.1| PREDICTED: DNA topoisomerase 2 isoform X2 [G... 78 6e-20
ref|XP_017619616.1| PREDICTED: DNA topoisomerase 2 isoform X1 [G... 78 6e-20
ref|XP_017619617.1| PREDICTED: DNA topoisomerase 2 isoform X2 [G... 78 6e-20
gb|PPD78478.1| hypothetical protein GOBAR_DD24581 [Gossypium bar... 78 6e-20
gb|KHG03878.1| DNA topoisomerase 2 -like protein [Gossypium arbo... 78 6e-20
>ref|XP_022935015.1| DNA topoisomerase 2 isoform X1 [Cucurbita moschata]
Length = 1492
Score = 78.6 bits (192), Expect(2) = 6e-21
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 29/138 (21%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFV-QYVGGGLITLNQ---DLFHQLQHHKFVPLRMNT 333
+E+RK+ L+E L ++L KL+NK++F+ V G +I N+ DLFH+LQ F P T
Sbjct: 1028 FEKRKRNLLENLETELLKLENKVRFILAVVNGEIIVSNRRRVDLFHELQEKGFTPFPKKT 1087
Query: 334 NDLE----GA-------------------SDYEYLLSML--TLPLKKVEELHEERGKLDA 438
+E GA SDYEYLL++ TL ++KV+EL ER K
Sbjct: 1088 KSVEPEVAGASNETDEAEESPEVVKGERVSDYEYLLALAIGTLTIEKVQELCNERDKFKG 1147
Query: 439 ELRALKSTSAKELWLQDL 492
E+ L+ + K LWL+DL
Sbjct: 1148 EVEELRKATPKSLWLKDL 1165
Score = 50.8 bits (120), Expect(2) = 6e-21
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3
Query: 48 KRKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFY 161
K+KF + T+NMHLFD+ V+KKY TP QILEEF+
Sbjct: 984 KKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEFF 1021
>ref|XP_023527820.1| DNA topoisomerase 2 isoform X1 [Cucurbita pepo subsp. pepo]
ref|XP_023527822.1| DNA topoisomerase 2 isoform X2 [Cucurbita pepo subsp. pepo]
Length = 1491
Score = 78.6 bits (192), Expect(2) = 6e-21
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 29/138 (21%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFV-QYVGGGLITLNQ---DLFHQLQHHKFVPLRMNT 333
+E+RK+ L+E L ++L KL+NK++F+ V G +I N+ DLFH+LQ F P T
Sbjct: 1028 FEKRKRNLLENLETELLKLENKVRFILAVVNGEIIVSNRRRVDLFHELQEKGFTPFPKKT 1087
Query: 334 NDLE----GA-------------------SDYEYLLSML--TLPLKKVEELHEERGKLDA 438
+E GA SDYEYLL++ TL ++KV+EL ER K
Sbjct: 1088 KSVEPEVAGASNETDEAEESPEVVKGERVSDYEYLLALAIGTLTIEKVQELCNERDKFKG 1147
Query: 439 ELRALKSTSAKELWLQDL 492
E+ L+ + K LWL+DL
Sbjct: 1148 EVEELRKATPKSLWLKDL 1165
Score = 50.8 bits (120), Expect(2) = 6e-21
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3
Query: 48 KRKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFY 161
K+KF + T+NMHLFD+ V+KKY TP QILEEF+
Sbjct: 984 KKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEFF 1021
>ref|XP_022982562.1| DNA topoisomerase 2 isoform X1 [Cucurbita maxima]
Length = 1491
Score = 78.6 bits (192), Expect(2) = 6e-21
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 29/138 (21%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFV-QYVGGGLITLNQ---DLFHQLQHHKFVPLRMNT 333
+E+RK+ L+E L ++L KL+NK++F+ V G +I N+ DLFH+LQ F P T
Sbjct: 1027 FEKRKRNLLENLETELLKLENKVRFILAVVNGEIIVSNRRRVDLFHELQEKGFTPFPKKT 1086
Query: 334 NDLE----GA-------------------SDYEYLLSML--TLPLKKVEELHEERGKLDA 438
+E GA SDYEYLL++ TL ++KV+EL ER K
Sbjct: 1087 KSVEPEVAGASNETDEAEESPEVVKGERVSDYEYLLALAIGTLTIEKVQELCNERDKFKG 1146
Query: 439 ELRALKSTSAKELWLQDL 492
E+ L+ + K LWL+DL
Sbjct: 1147 EVEELRKATPKSLWLKDL 1164
Score = 50.8 bits (120), Expect(2) = 6e-21
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3
Query: 48 KRKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFY 161
K+KF + T+NMHLFD+ V+KKY TP QILEEF+
Sbjct: 983 KKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEFF 1020
>ref|XP_022935016.1| DNA topoisomerase 2 isoform X2 [Cucurbita moschata]
Length = 1491
Score = 78.6 bits (192), Expect(2) = 6e-21
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 29/138 (21%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFV-QYVGGGLITLNQ---DLFHQLQHHKFVPLRMNT 333
+E+RK+ L+E L ++L KL+NK++F+ V G +I N+ DLFH+LQ F P T
Sbjct: 1028 FEKRKRNLLENLETELLKLENKVRFILAVVNGEIIVSNRRRVDLFHELQEKGFTPFPKKT 1087
Query: 334 NDLE----GA-------------------SDYEYLLSML--TLPLKKVEELHEERGKLDA 438
+E GA SDYEYLL++ TL ++KV+EL ER K
Sbjct: 1088 KSVEPEVAGASNETDEAEESPEVVKGERVSDYEYLLALAIGTLTIEKVQELCNERDKFKG 1147
Query: 439 ELRALKSTSAKELWLQDL 492
E+ L+ + K LWL+DL
Sbjct: 1148 EVEELRKATPKSLWLKDL 1165
Score = 50.8 bits (120), Expect(2) = 6e-21
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3
Query: 48 KRKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFY 161
K+KF + T+NMHLFD+ V+KKY TP QILEEF+
Sbjct: 984 KKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEFF 1021
>ref|XP_023527823.1| DNA topoisomerase 2 isoform X3 [Cucurbita pepo subsp. pepo]
ref|XP_023527824.1| DNA topoisomerase 2 isoform X4 [Cucurbita pepo subsp. pepo]
Length = 1490
Score = 78.6 bits (192), Expect(2) = 6e-21
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 29/138 (21%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFV-QYVGGGLITLNQ---DLFHQLQHHKFVPLRMNT 333
+E+RK+ L+E L ++L KL+NK++F+ V G +I N+ DLFH+LQ F P T
Sbjct: 1028 FEKRKRNLLENLETELLKLENKVRFILAVVNGEIIVSNRRRVDLFHELQEKGFTPFPKKT 1087
Query: 334 NDLE----GA-------------------SDYEYLLSML--TLPLKKVEELHEERGKLDA 438
+E GA SDYEYLL++ TL ++KV+EL ER K
Sbjct: 1088 KSVEPEVAGASNETDEAEESPEVVKGERVSDYEYLLALAIGTLTIEKVQELCNERDKFKG 1147
Query: 439 ELRALKSTSAKELWLQDL 492
E+ L+ + K LWL+DL
Sbjct: 1148 EVEELRKATPKSLWLKDL 1165
Score = 50.8 bits (120), Expect(2) = 6e-21
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3
Query: 48 KRKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFY 161
K+KF + T+NMHLFD+ V+KKY TP QILEEF+
Sbjct: 984 KKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEFF 1021
>ref|XP_022982563.1| DNA topoisomerase 2 isoform X2 [Cucurbita maxima]
Length = 1490
Score = 78.6 bits (192), Expect(2) = 6e-21
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 29/138 (21%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFV-QYVGGGLITLNQ---DLFHQLQHHKFVPLRMNT 333
+E+RK+ L+E L ++L KL+NK++F+ V G +I N+ DLFH+LQ F P T
Sbjct: 1027 FEKRKRNLLENLETELLKLENKVRFILAVVNGEIIVSNRRRVDLFHELQEKGFTPFPKKT 1086
Query: 334 NDLE----GA-------------------SDYEYLLSML--TLPLKKVEELHEERGKLDA 438
+E GA SDYEYLL++ TL ++KV+EL ER K
Sbjct: 1087 KSVEPEVAGASNETDEAEESPEVVKGERVSDYEYLLALAIGTLTIEKVQELCNERDKFKG 1146
Query: 439 ELRALKSTSAKELWLQDL 492
E+ L+ + K LWL+DL
Sbjct: 1147 EVEELRKATPKSLWLKDL 1164
Score = 50.8 bits (120), Expect(2) = 6e-21
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3
Query: 48 KRKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFY 161
K+KF + T+NMHLFD+ V+KKY TP QILEEF+
Sbjct: 983 KKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEFF 1020
>ref|XP_023527825.1| DNA topoisomerase 2 isoform X5 [Cucurbita pepo subsp. pepo]
Length = 1269
Score = 78.6 bits (192), Expect(2) = 6e-21
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 29/138 (21%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFV-QYVGGGLITLNQ---DLFHQLQHHKFVPLRMNT 333
+E+RK+ L+E L ++L KL+NK++F+ V G +I N+ DLFH+LQ F P T
Sbjct: 1028 FEKRKRNLLENLETELLKLENKVRFILAVVNGEIIVSNRRRVDLFHELQEKGFTPFPKKT 1087
Query: 334 NDLE----GA-------------------SDYEYLLSML--TLPLKKVEELHEERGKLDA 438
+E GA SDYEYLL++ TL ++KV+EL ER K
Sbjct: 1088 KSVEPEVAGASNETDEAEESPEVVKGERVSDYEYLLALAIGTLTIEKVQELCNERDKFKG 1147
Query: 439 ELRALKSTSAKELWLQDL 492
E+ L+ + K LWL+DL
Sbjct: 1148 EVEELRKATPKSLWLKDL 1165
Score = 50.8 bits (120), Expect(2) = 6e-21
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3
Query: 48 KRKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFY 161
K+KF + T+NMHLFD+ V+KKY TP QILEEF+
Sbjct: 984 KKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEFF 1021
>ref|XP_023527826.1| DNA topoisomerase 2 isoform X6 [Cucurbita pepo subsp. pepo]
Length = 1268
Score = 78.6 bits (192), Expect(2) = 6e-21
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 29/138 (21%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFV-QYVGGGLITLNQ---DLFHQLQHHKFVPLRMNT 333
+E+RK+ L+E L ++L KL+NK++F+ V G +I N+ DLFH+LQ F P T
Sbjct: 1028 FEKRKRNLLENLETELLKLENKVRFILAVVNGEIIVSNRRRVDLFHELQEKGFTPFPKKT 1087
Query: 334 NDLE----GA-------------------SDYEYLLSML--TLPLKKVEELHEERGKLDA 438
+E GA SDYEYLL++ TL ++KV+EL ER K
Sbjct: 1088 KSVEPEVAGASNETDEAEESPEVVKGERVSDYEYLLALAIGTLTIEKVQELCNERDKFKG 1147
Query: 439 ELRALKSTSAKELWLQDL 492
E+ L+ + K LWL+DL
Sbjct: 1148 EVEELRKATPKSLWLKDL 1165
Score = 50.8 bits (120), Expect(2) = 6e-21
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3
Query: 48 KRKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFY 161
K+KF + T+NMHLFD+ V+KKY TP QILEEF+
Sbjct: 984 KKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEFF 1021
>gb|OWM78385.1| hypothetical protein CDL15_Pgr016109 [Punica granatum]
gb|PKI31894.1| hypothetical protein CRG98_047704 [Punica granatum]
Length = 1473
Score = 79.3 bits (194), Expect(2) = 2e-20
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 31/141 (21%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFVQYVGGGLITLNQ----DLFHQLQHHKFVPLRMNT 333
YE+RK++L++ L +L KLDNK++F+ V G I +N +LF +LQ F P T
Sbjct: 1022 YEKRKKFLLDNLEMELLKLDNKVRFILGVVNGEIIVNNRKRAELFIELQEKGFTPFPKKT 1081
Query: 334 NDLEG-------------------------ASDYEYLLSML--TLPLKKVEELHEERGKL 432
+E ASDYEYLLSM +L +KV+EL ER KL
Sbjct: 1082 KSIEAAIAGASEDSEETEDNSESTGSKEVKASDYEYLLSMAIGSLTREKVQELCAERDKL 1141
Query: 433 DAELRALKSTSAKELWLQDLK 495
E+ LKS++ +LWL+DL+
Sbjct: 1142 LDEVEGLKSSTPMDLWLKDLE 1162
Score = 48.5 bits (114), Expect(2) = 2e-20
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +3
Query: 51 RKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFY 161
+KF I T+NMHLFD+ ++KKY TP QILEEF+
Sbjct: 979 KKFKLTSTISTSNMHLFDAKGIIKKYDTPEQILEEFF 1015
>gb|KZV36276.1| DNA topoisomerase 2 [Dorcoceras hygrometricum]
Length = 1455
Score = 76.6 bits (187), Expect(2) = 2e-20
Identities = 55/142 (38%), Positives = 76/142 (53%), Gaps = 31/142 (21%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFVQ-YVGGGLITLNQ---DLFHQLQHHKFVP----- 318
YE+RK+ L+ L +DL K +NK KF++ V G +I N+ DLF +L+ F P
Sbjct: 999 YEKRKKALLANLENDLLKCENKYKFIRCVVEGSIIVSNRKRADLFRELKEKGFTPFPKKK 1058
Query: 319 ------LRMNTNDLE--------------GASDYEYLLSML--TLPLKKVEELHEERGKL 432
+ +T+D E SDY+YLLSM TL L+K++EL ER KL
Sbjct: 1059 SSADVFIAGSTDDAEDTGENSPGATGSGDSTSDYDYLLSMAIGTLTLEKLQELRAERDKL 1118
Query: 433 DAELRALKSTSAKELWLQDLKA 498
E+ LKS++ K LWL DL A
Sbjct: 1119 LQEVEELKSSTIKSLWLSDLDA 1140
Score = 50.8 bits (120), Expect(2) = 2e-20
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3
Query: 51 RKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFYEV 167
+KF I T+NMHLFDS ++KKY TP QILEEF+ +
Sbjct: 956 KKFKLTTSISTSNMHLFDSNGLIKKYDTPEQILEEFFHI 994
>gb|PON74229.1| DNA topoisomerase II-type [Parasponia andersonii]
Length = 1397
Score = 75.5 bits (184), Expect(2) = 3e-20
Identities = 55/143 (38%), Positives = 74/143 (51%), Gaps = 32/143 (22%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFVQYVGGGLITLNQ----DLFHQLQHHKFVPLRMNT 333
YE+RK+ L++ L DL KL+NK++F+ V G I +N DLF +LQ F P T
Sbjct: 987 YEKRKKVLLDNLELDLLKLENKVRFILGVVKGEIIVNNRKRADLFVELQKKGFTPFPKKT 1046
Query: 334 NDLE----GA----------------------SDYEYLLSML--TLPLKKVEELHEERGK 429
+E GA SDYEYLLSM TL L+KV+ L ER K
Sbjct: 1047 KSVEPEVAGATEETEDTEDNSNAEAAATEVRISDYEYLLSMAIGTLTLEKVQALLAERDK 1106
Query: 430 LDAELRALKSTSAKELWLQDLKA 498
L+ E+ L+ + K LW++DL A
Sbjct: 1107 LNNEVDELRKATPKSLWVRDLDA 1129
Score = 51.6 bits (122), Expect(2) = 3e-20
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3
Query: 51 RKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFYEV 167
+KF I TTNMHLFD+ V+KKY TP QILEEF+ +
Sbjct: 944 KKFKLTTSISTTNMHLFDANGVIKKYDTPEQILEEFFHL 982
>gb|PAN07751.1| hypothetical protein PAHAL_A03043 [Panicum hallii]
Length = 1481
Score = 77.4 bits (189), Expect(2) = 6e-20
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 28/137 (20%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFVQYVGGGLITLNQ----DLFHQLQHHKFVPLRMNT 333
Y++RK+ L++ + DL+KL+NK++F++ V I +N DLF +L+ F P M
Sbjct: 1015 YDKRKKTLLQNIKLDLKKLENKVRFIRCVVDNEIVVNNRKRADLFLELREKNFDPFPMKK 1074
Query: 334 NDLEGA----------------------SDYEYLLSML--TLPLKKVEELHEERGKLDAE 441
E A SDYEYL+SM TL L+K+++L+ ER KL E
Sbjct: 1075 KKAEPAAVGAIEEEENEESPEAANGVDPSDYEYLISMAIGTLTLEKIQDLNAEREKLVNE 1134
Query: 442 LRALKSTSAKELWLQDL 492
+ L++T+ K LWL+DL
Sbjct: 1135 VEELENTTPKSLWLRDL 1151
Score = 48.5 bits (114), Expect(2) = 6e-20
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3
Query: 51 RKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFYEV 167
+KF I T+NMHLFDS ++KY TP QILEEFY++
Sbjct: 972 KKFKLTTTIGTSNMHLFDSDGKIRKYDTPEQILEEFYKL 1010
>ref|XP_016722312.1| PREDICTED: DNA topoisomerase 2 isoform X1 [Gossypium hirsutum]
Length = 1462
Score = 78.2 bits (191), Expect(2) = 6e-20
Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 26/136 (19%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFVQYVGGGLITLNQ----DLFHQLQHHKFVPLRMNT 333
YE+R++++++ L +L K+DNK++F+ V G I +N DLF +LQ F P T
Sbjct: 1013 YEKRRKHMLDTLELELLKMDNKVRFILDVVKGNIIVNNRKRADLFLELQEKGFTPFPKKT 1072
Query: 334 N----------DLEG----------ASDYEYLLSML--TLPLKKVEELHEERGKLDAELR 447
D EG ASDY+YLLSM TL L+KV+EL +R KL+ E+
Sbjct: 1073 KAVEVAVAGDIDHEGEPELSPEATRASDYDYLLSMAIGTLTLEKVQELCSDRDKLEHEVE 1132
Query: 448 ALKSTSAKELWLQDLK 495
L+ + K LWL+DL+
Sbjct: 1133 ELRKHTPKSLWLKDLE 1148
Score = 47.8 bits (112), Expect(2) = 6e-20
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +3
Query: 51 RKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFYEV 167
+KF + T+NMHLFDS ++KKY TP +IL+EFY +
Sbjct: 970 KKFKLTTTVSTSNMHLFDSRGMIKKYDTPEEILDEFYHL 1008
>ref|XP_012455306.1| PREDICTED: DNA topoisomerase 2 isoform X1 [Gossypium raimondii]
gb|KJB73930.1| hypothetical protein B456_011G261600 [Gossypium raimondii]
Length = 1462
Score = 78.2 bits (191), Expect(2) = 6e-20
Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 26/136 (19%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFVQYVGGGLITLNQ----DLFHQLQHHKFVPLRMNT 333
YE+R++++++ L +L K+DNK++F+ V G I +N DLF +LQ F P T
Sbjct: 1013 YEKRRKHMLDTLELELLKMDNKVRFILDVVKGNIIVNNRKRADLFLELQEKGFTPFPKKT 1072
Query: 334 N----------DLEG----------ASDYEYLLSML--TLPLKKVEELHEERGKLDAELR 447
D EG ASDY+YLLSM TL L+KV+EL +R KL+ E+
Sbjct: 1073 KAVEVAVAGDIDHEGEPELSPEATRASDYDYLLSMAIGTLTLEKVQELCSDRDKLEHEVE 1132
Query: 448 ALKSTSAKELWLQDLK 495
L+ + K LWL+DL+
Sbjct: 1133 ELRKHTPKSLWLKDLE 1148
Score = 47.8 bits (112), Expect(2) = 6e-20
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +3
Query: 51 RKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFYEV 167
+KF + T+NMHLFDS ++KKY TP +IL+EFY +
Sbjct: 970 KKFKLTTTVSTSNMHLFDSRGMIKKYDTPEEILDEFYHL 1008
>ref|XP_016722313.1| PREDICTED: DNA topoisomerase 2 isoform X2 [Gossypium hirsutum]
Length = 1461
Score = 78.2 bits (191), Expect(2) = 6e-20
Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 26/136 (19%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFVQYVGGGLITLNQ----DLFHQLQHHKFVPLRMNT 333
YE+R++++++ L +L K+DNK++F+ V G I +N DLF +LQ F P T
Sbjct: 1013 YEKRRKHMLDTLELELLKMDNKVRFILDVVKGNIIVNNRKRADLFLELQEKGFTPFPKKT 1072
Query: 334 N----------DLEG----------ASDYEYLLSML--TLPLKKVEELHEERGKLDAELR 447
D EG ASDY+YLLSM TL L+KV+EL +R KL+ E+
Sbjct: 1073 KAVEVAVAGDIDHEGEPELSPEATRASDYDYLLSMAIGTLTLEKVQELCSDRDKLEHEVE 1132
Query: 448 ALKSTSAKELWLQDLK 495
L+ + K LWL+DL+
Sbjct: 1133 ELRKHTPKSLWLKDLE 1148
Score = 47.8 bits (112), Expect(2) = 6e-20
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +3
Query: 51 RKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFYEV 167
+KF + T+NMHLFDS ++KKY TP +IL+EFY +
Sbjct: 970 KKFKLTTTVSTSNMHLFDSRGMIKKYDTPEEILDEFYHL 1008
>ref|XP_012455307.1| PREDICTED: DNA topoisomerase 2 isoform X2 [Gossypium raimondii]
gb|KJB73929.1| hypothetical protein B456_011G261600 [Gossypium raimondii]
Length = 1461
Score = 78.2 bits (191), Expect(2) = 6e-20
Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 26/136 (19%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFVQYVGGGLITLNQ----DLFHQLQHHKFVPLRMNT 333
YE+R++++++ L +L K+DNK++F+ V G I +N DLF +LQ F P T
Sbjct: 1013 YEKRRKHMLDTLELELLKMDNKVRFILDVVKGNIIVNNRKRADLFLELQEKGFTPFPKKT 1072
Query: 334 N----------DLEG----------ASDYEYLLSML--TLPLKKVEELHEERGKLDAELR 447
D EG ASDY+YLLSM TL L+KV+EL +R KL+ E+
Sbjct: 1073 KAVEVAVAGDIDHEGEPELSPEATRASDYDYLLSMAIGTLTLEKVQELCSDRDKLEHEVE 1132
Query: 448 ALKSTSAKELWLQDLK 495
L+ + K LWL+DL+
Sbjct: 1133 ELRKHTPKSLWLKDLE 1148
Score = 47.8 bits (112), Expect(2) = 6e-20
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +3
Query: 51 RKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFYEV 167
+KF + T+NMHLFDS ++KKY TP +IL+EFY +
Sbjct: 970 KKFKLTTTVSTSNMHLFDSRGMIKKYDTPEEILDEFYHL 1008
>ref|XP_017619616.1| PREDICTED: DNA topoisomerase 2 isoform X1 [Gossypium arboreum]
Length = 1460
Score = 78.2 bits (191), Expect(2) = 6e-20
Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 26/136 (19%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFVQYVGGGLITLNQ----DLFHQLQHHKFVPLRMNT 333
YE+R++++++ L +L K+DNK++F+ V G I +N DLF +LQ F P T
Sbjct: 1013 YEKRRKHMLDTLELELLKMDNKVRFILDVVKGNIIVNNRKRADLFLELQEKGFTPFPKKT 1072
Query: 334 NDLE--------------------GASDYEYLLSML--TLPLKKVEELHEERGKLDAELR 447
+E ASDY+YLLSM TL L+KV+EL +R KL+ E+
Sbjct: 1073 KGVEVAVAGDIDHEGEPELSPEATRASDYDYLLSMAIGTLTLEKVQELCSDRDKLEHEVE 1132
Query: 448 ALKSTSAKELWLQDLK 495
L+ + K LWL+DL+
Sbjct: 1133 ELRKHTPKSLWLKDLE 1148
Score = 47.8 bits (112), Expect(2) = 6e-20
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +3
Query: 51 RKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFYEV 167
+KF + T+NMHLFDS ++KKY TP +IL+EFY +
Sbjct: 970 KKFKLTTTVSTSNMHLFDSRGMIKKYDTPEEILDEFYHL 1008
>ref|XP_017619617.1| PREDICTED: DNA topoisomerase 2 isoform X2 [Gossypium arboreum]
Length = 1459
Score = 78.2 bits (191), Expect(2) = 6e-20
Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 26/136 (19%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFVQYVGGGLITLNQ----DLFHQLQHHKFVPLRMNT 333
YE+R++++++ L +L K+DNK++F+ V G I +N DLF +LQ F P T
Sbjct: 1013 YEKRRKHMLDTLELELLKMDNKVRFILDVVKGNIIVNNRKRADLFLELQEKGFTPFPKKT 1072
Query: 334 NDLE--------------------GASDYEYLLSML--TLPLKKVEELHEERGKLDAELR 447
+E ASDY+YLLSM TL L+KV+EL +R KL+ E+
Sbjct: 1073 KGVEVAVAGDIDHEGEPELSPEATRASDYDYLLSMAIGTLTLEKVQELCSDRDKLEHEVE 1132
Query: 448 ALKSTSAKELWLQDLK 495
L+ + K LWL+DL+
Sbjct: 1133 ELRKHTPKSLWLKDLE 1148
Score = 47.8 bits (112), Expect(2) = 6e-20
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +3
Query: 51 RKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFYEV 167
+KF + T+NMHLFDS ++KKY TP +IL+EFY +
Sbjct: 970 KKFKLTTTVSTSNMHLFDSRGMIKKYDTPEEILDEFYHL 1008
>gb|PPD78478.1| hypothetical protein GOBAR_DD24581 [Gossypium barbadense]
Length = 1420
Score = 78.2 bits (191), Expect(2) = 6e-20
Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 26/136 (19%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFVQYVGGGLITLNQ----DLFHQLQHHKFVPLRMNT 333
YE+R++++++ L +L K+DNK++F+ V G I +N DLF +LQ F P T
Sbjct: 989 YEKRRKHMLDTLELELLKMDNKVRFILDVVKGNIIVNNRKRADLFLELQEKGFTPFPKKT 1048
Query: 334 N----------DLEG----------ASDYEYLLSML--TLPLKKVEELHEERGKLDAELR 447
D EG ASDY+YLLSM TL L+KV+EL +R KL+ E+
Sbjct: 1049 KAVEVAVAGDIDHEGEPELSPEATRASDYDYLLSMAIGTLTLEKVQELCSDRDKLEHEVE 1108
Query: 448 ALKSTSAKELWLQDLK 495
L+ + K LWL+DL+
Sbjct: 1109 ELRKHTPKSLWLKDLE 1124
Score = 47.8 bits (112), Expect(2) = 6e-20
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +3
Query: 51 RKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFYEV 167
+KF + T+NMHLFDS ++KKY TP +IL+EFY +
Sbjct: 946 KKFKLTTTVSTSNMHLFDSRGMIKKYDTPEEILDEFYHL 984
>gb|KHG03878.1| DNA topoisomerase 2 -like protein [Gossypium arboreum]
Length = 1245
Score = 78.2 bits (191), Expect(2) = 6e-20
Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 26/136 (19%)
Frame = +1
Query: 166 YERRKQYLVEKLLSDLEKLDNKIKFVQYVGGGLITLNQ----DLFHQLQHHKFVPLRMNT 333
YE+R++++++ L +L K+DNK++F+ V G I +N DLF +LQ F P T
Sbjct: 1013 YEKRRKHMLDTLELELLKMDNKVRFILDVVKGNIIVNNRKRADLFLELQEKGFTPFPKKT 1072
Query: 334 NDLE--------------------GASDYEYLLSML--TLPLKKVEELHEERGKLDAELR 447
+E ASDY+YLLSM TL L+KV+EL +R KL+ E+
Sbjct: 1073 KGVEVAVAGDIDHEGEPELSPEATRASDYDYLLSMAIGTLTLEKVQELCSDRDKLEHEVE 1132
Query: 448 ALKSTSAKELWLQDLK 495
L+ + K LWL+DL+
Sbjct: 1133 ELRKHTPKSLWLKDLE 1148
Score = 47.8 bits (112), Expect(2) = 6e-20
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +3
Query: 51 RKFIAPKKIRTTNMHLFDSGSVLKKYRTPRQILEEFYEV 167
+KF + T+NMHLFDS ++KKY TP +IL+EFY +
Sbjct: 970 KKFKLTTTVSTSNMHLFDSRGMIKKYDTPEEILDEFYHL 1008