BLASTX nr result

ID: Ophiopogon24_contig00019326 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00019326
         (443 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020270190.1| reticulon-like protein B21 isoform X2 [Aspar...    83   1e-15
ref|XP_020270186.1| reticulon-like protein B21 isoform X1 [Aspar...    80   9e-15
ref|XP_010912152.1| PREDICTED: reticulon-like protein B21 [Elaei...    60   2e-07

>ref|XP_020270190.1| reticulon-like protein B21 isoform X2 [Asparagus officinalis]
 gb|ONK78900.1| uncharacterized protein A4U43_C01F800 [Asparagus officinalis]
          Length = 482

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 59/160 (36%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
 Frame = +2

Query: 2   WKPPEPVSDNKNPIRLRKARSERLSRNXXXXXXXXXXXXXXX---------KNFDDKEID 154
           WKPPEP       I+LRK++SE  + +                        K FDDKEID
Sbjct: 76  WKPPEPADS----IQLRKSKSELSNSSKVGSNGEDEEEEDDDDEIEIEGEVKGFDDKEID 131

Query: 155 XXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXXPVSLPPEI----DPATDLKKIERMESD 322
                      +                      + + PEI    +P  DLK+   ME D
Sbjct: 132 LPVEKSKPKMVVEVGEEKRVSQVNE---------IPIAPEIGMKENPEMDLKE---MEPD 179

Query: 323 PVKPHATEIEKEVFEIGSESANRMQNIVDLVMWRDISKSA 442
           P+KP   E+E+E+ EIGSE+ NRMQNIVDLVMWRDIS+SA
Sbjct: 180 PLKPQPIEVEEEMLEIGSETQNRMQNIVDLVMWRDISRSA 219


>ref|XP_020270186.1| reticulon-like protein B21 isoform X1 [Asparagus officinalis]
          Length = 483

 Score = 80.5 bits (197), Expect = 9e-15
 Identities = 60/161 (37%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
 Frame = +2

Query: 2   WKPPEPVSDNKNPIRLRKARSERLSRNXXXXXXXXXXXXXXX---------KNFDDKEID 154
           WKPPEP       I+LRK++SE  + +                        K FDDKEID
Sbjct: 76  WKPPEPADS----IQLRKSKSELSNSSKVGSNGEDEEEEDDDDEIEIEGEVKGFDDKEID 131

Query: 155 XXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXXPVSLPPEI----DPATDLKKIERMESD 322
                      +                      + + PEI    +P  DLK+   ME D
Sbjct: 132 LPVEKSKPKMVVEVGEEKRVSQVNE---------IPIAPEIGMKENPEMDLKE---MEPD 179

Query: 323 PVKPHAT-EIEKEVFEIGSESANRMQNIVDLVMWRDISKSA 442
           P+KP  T E+E+E+ EIGSE+ NRMQNIVDLVMWRDIS+SA
Sbjct: 180 PLKPQPTVEVEEEMLEIGSETQNRMQNIVDLVMWRDISRSA 220


>ref|XP_010912152.1| PREDICTED: reticulon-like protein B21 [Elaeis guineensis]
          Length = 536

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
 Frame = +2

Query: 257 VSLPPEIDPATDLKKIER--MESDPVKPHATEIEKEVFEIGSESANRMQNIVDLVMWRDI 430
           +++ P+++    L+ I R  +  DP+KP   E+E+E+F   S + NRMQNIV+LVMWRD+
Sbjct: 226 IAVLPKVEKKPMLQVIRRRPIHLDPIKPSPVEVEEEIFVNISATQNRMQNIVNLVMWRDV 285

Query: 431 SKSA 442
           SK+A
Sbjct: 286 SKTA 289


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