BLASTX nr result

ID: Ophiopogon24_contig00019238 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00019238
         (383 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK75645.1| uncharacterized protein A4U43_C03F19050 [Asparagu...    85   4e-17
ref|XP_020257491.1| transcription factor SAC51-like [Asparagus o...    79   6e-15
ref|XP_020273697.1| transcription factor bHLH144-like [Asparagus...    60   2e-08

>gb|ONK75645.1| uncharacterized protein A4U43_C03F19050 [Asparagus officinalis]
          Length = 327

 Score = 85.1 bits (209), Expect = 4e-17
 Identities = 39/51 (76%), Positives = 43/51 (84%)
 Frame = +3

Query: 228 GAILMGKDCDPWQFRSFHCVSNVGAPALAKQSTNSMVCPTYADPCGFFHLN 380
           GA+LM KDCD  Q RSF+C +NVGAPALAKQSTN +V PTYADP GFFHLN
Sbjct: 62  GAVLMEKDCDHLQLRSFNCATNVGAPALAKQSTNPVVFPTYADPYGFFHLN 112


>ref|XP_020257491.1| transcription factor SAC51-like [Asparagus officinalis]
          Length = 262

 Score = 78.6 bits (192), Expect = 6e-15
 Identities = 36/47 (76%), Positives = 39/47 (82%)
 Frame = +3

Query: 240 MGKDCDPWQFRSFHCVSNVGAPALAKQSTNSMVCPTYADPCGFFHLN 380
           M KDCD  Q RSF+C +NVGAPALAKQSTN +V PTYADP GFFHLN
Sbjct: 1   MEKDCDHLQLRSFNCATNVGAPALAKQSTNPVVFPTYADPYGFFHLN 47


>ref|XP_020273697.1| transcription factor bHLH144-like [Asparagus officinalis]
 gb|ONK64351.1| uncharacterized protein A4U43_C07F24910 [Asparagus officinalis]
          Length = 245

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 32/48 (66%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
 Frame = +3

Query: 240 MGKDCDPWQFRSFHCVSNVGAPAL-AKQSTNSMVCPTYADPCGFFHLN 380
           MG+D DPWQ RSF+C SNVGA AL  KQSTN    P YADP GFF  N
Sbjct: 1   MGEDFDPWQLRSFNCESNVGASALDPKQSTN----PNYADPFGFFSPN 44


Top