BLASTX nr result

ID: Ophiopogon24_contig00018929 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00018929
         (563 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020253457.1| LOW QUALITY PROTEIN: branchpoint-bridging pr...    57   3e-06

>ref|XP_020253457.1| LOW QUALITY PROTEIN: branchpoint-bridging protein-like [Asparagus
           officinalis]
          Length = 589

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 36/70 (51%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +2

Query: 44  SSDTSQGIAIAPWA-NP-PPSSDASQGIANXXXXXXXXXXXXXXXXXXXXXXXXSYGGDT 217
           S+D SQG AI PWA NP PPSSD SQGIAN                        + GGDT
Sbjct: 521 STDASQGFAIPPWAQNPQPPSSDQSQGIANAPWSSNPPQAPPIQHVSSTEQQTTN-GGDT 579

Query: 218 EYEKFMSEMK 247
           +YEKFMSEMK
Sbjct: 580 DYEKFMSEMK 589


Top