BLASTX nr result

ID: Ophiopogon24_contig00018818 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00018818
         (433 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248636.1| translocase of chloroplast 120, chloroplasti...    82   3e-15

>ref|XP_020248636.1| translocase of chloroplast 120, chloroplastic [Asparagus
           officinalis]
 gb|ONK57100.1| uncharacterized protein A4U43_C10F16620 [Asparagus officinalis]
          Length = 1215

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 51/110 (46%), Positives = 65/110 (59%), Gaps = 16/110 (14%)
 Frame = +3

Query: 12  DGMGVDCVTECKKET-MDELAMDTDTESNERAYTEGVEELVNDSVGSDS----------- 155
           D  GVD  T+ K++T +DE+ +DTD +  E    E V+ +VNDSV  DS           
Sbjct: 313 DERGVDTGTKSKEQTHVDEMGVDTDVKFKEELPNESVKHMVNDSVELDSTYDDQTTYMQR 372

Query: 156 ----APSTLSGTNNGDISRSYASVVKEGTSEGKTEQAKAEGSRSGNKSEV 293
               +PS LS T NG  +RSYASVVKE T +GK EQAK +GS   +KSEV
Sbjct: 373 EAVHSPSPLSVTANGITTRSYASVVKESTPDGKLEQAKEDGSSCDSKSEV 422


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