BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00018675
         (672 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   264   9e-80
emb|CDP17738.1| unnamed protein product [Coffea canephora]            250   8e-75
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   244   3e-71
ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116...   220   2e-69
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   236   3e-68
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   236   4e-68
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   228   4e-67
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]            229   6e-67
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        230   5e-66
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     229   1e-65
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   228   2e-65
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     229   2e-65
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   229   2e-65
emb|CAJ86192.1| H0306F03.15 [Oryza sativa]                            228   2e-65
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   228   4e-65
emb|CAJ86151.1| H0413E07.4 [Oryza sativa]                             228   4e-65
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         226   5e-65
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]                        226   5e-65
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]            228   5e-65
gb|AAC12735.1| putative retrovirus-related polyprotein, partial ...   207   7e-64

>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  264 bits (674), Expect = 9e-80
 Identities = 123/228 (53%), Positives = 170/228 (74%), Gaps = 6/228 (2%)
 Frame = +1

Query: 1   FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
           F  F+++D GVV MGND+ C+  GIG+++++  DG  R   DVRYVP+LKKNL+SLG LE
Sbjct: 241 FFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALE 300

Query: 175 SQGHKITMEHGVLKVTKGSLVVMKGVRDRNLYL-QGSTVTGALAASVDTG---ADTSRLW 342
           S+G  +TM  G+LK T G+LV++KGV   NLY  QGSTV G +AA+  +    A+ ++LW
Sbjct: 301 SKGLVVTMRDGILKATLGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAKLW 360

Query: 343 HMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVH 522
           HMRLGH GE               K+CK++FCEHC+LGK+ +VKFGTA+H T+G+LDYVH
Sbjct: 361 HMRLGHAGEKSLQILTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVH 420

Query: 523 TDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
           +DVWGP++  S+GG +YFV+F+DD+SRR WV+TMK+K++VLE F++WK
Sbjct: 421 SDVWGPAKTPSIGGRHYFVTFVDDFSRRVWVFTMKNKNDVLEIFLKWK 468


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  250 bits (639), Expect = 8e-75
 Identities = 120/231 (51%), Positives = 164/231 (70%), Gaps = 7/231 (3%)
 Frame = +1

Query: 1    FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
            F  FE++D G V MGND+ C+  GIG+++++  DG  R  +DVRYVP LK++L+SLG+LE
Sbjct: 326  FFEFEELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLE 385

Query: 175  SQGHKITMEHGVLKVTKGSLVVMKGVRDRNLYL-QGSTVTGALAASVDTG----ADTSRL 339
            S+G ++ M  G+LKVT G+L+++KGVR  NLY  QGSTV G  A +  +     A+ ++L
Sbjct: 386  SKGLEVRMRDGILKVTSGALLMLKGVRKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKL 445

Query: 340  WHMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYV 519
            WHMRLG  GE               K CK++FCEHC+L K+ KVKFGT +H T+G+LDYV
Sbjct: 446  WHMRLGDAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYV 505

Query: 520  HTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKR 672
            H+DVWGP++  SLGG  YFV+FIDD+SRR WV+TMK K E+L+ F++WK R
Sbjct: 506  HSDVWGPAKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEMLKIFLKWKAR 556


>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1032

 Score =  244 bits (622), Expect = 3e-71
 Identities = 117/230 (50%), Positives = 160/230 (69%), Gaps = 6/230 (2%)
 Frame = +1

Query: 1   FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
           F  F +++ GVV   ND      GIG++R+K  DG +R  +DVR+VP L +NL+S+G LE
Sbjct: 90  FYDFRELEEGVVYTANDVPLTTHGIGSIRLKNRDGAIRTLKDVRFVPSLSRNLISVGALE 149

Query: 175 SQGHKITMEHGVLKVTKGSLVVMKGVRDRN--LYLQGSTVTG--ALAASVDTGADTSRLW 342
            +G  +  E GV+K+  G+LVVMKGVR  N   Y QG+T+ G  A+A+S +   ++++LW
Sbjct: 150 EKGFTVHAEGGVMKIISGALVVMKGVRKNNRLYYYQGTTIIGTAAVASSDEKELESAKLW 209

Query: 343 HMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVH 522
           HMRLGH GE               ++CK+DFCEHC+ GKKT+VKFGTA+H T+G+LDYVH
Sbjct: 210 HMRLGHAGERSLNLLMKQGLLKNIQACKLDFCEHCVKGKKTRVKFGTAIHDTKGILDYVH 269

Query: 523 TDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKR 672
           +DVWGPS+  SL G +Y+V+F+DD+SRR WVY MK K EVL  F++WKKR
Sbjct: 270 SDVWGPSKTASLAGNHYYVTFVDDFSRRIWVYAMKTKDEVLGIFLKWKKR 319


>ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116374, partial [Tarenaya
           hassleriana]
          Length = 209

 Score =  220 bits (561), Expect = 2e-69
 Identities = 106/193 (54%), Positives = 140/193 (72%), Gaps = 5/193 (2%)
 Frame = +1

Query: 1   FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
           F  FE++D GVV MGN+ + Q  GIG++R++  DG  R   +VRYVP LKKNL+SLG LE
Sbjct: 16  FFNFEELDGGVVYMGNNDALQATGIGSIRLRCHDGTTRILTEVRYVPNLKKNLISLGTLE 75

Query: 175 SQGHKITMEHGVLKVTKGSLVVMKGVRDRNLY-LQGSTVTGALA--ASVDTGADTSRLWH 345
           S+G+ +T+  G+LKV  G+LVV+KGVR  NLY  +GSTV G +A  A  D  ++ +RLWH
Sbjct: 76  SKGYTVTIRDGILKVVSGALVVLKGVRKNNLYYFKGSTVIGTVAVTAGEDKDSEVTRLWH 135

Query: 346 MRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVHT 525
           MRLGH GE              A+ CK++FCEHC+LGK++KVKFGTA+H TEG+LDY+H+
Sbjct: 136 MRLGHPGEKALQNLVKQGVLKGARLCKLEFCEHCVLGKQSKVKFGTAIHNTEGILDYIHS 195

Query: 526 DVWGPSQNTSLGG 564
           DVWGP++ TSLGG
Sbjct: 196 DVWGPTRETSLGG 208


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  236 bits (603), Expect = 3e-68
 Identities = 118/227 (51%), Positives = 161/227 (70%), Gaps = 5/227 (2%)
 Frame = +1

Query: 1    FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVRE--DVRYVPQLKKNLMSLGVLE 174
            FST+EK  SG V+MGNDH+CQV GIGTVRIKM DG+VR   DVR++P++KKNL+SL  L+
Sbjct: 805  FSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLD 863

Query: 175  SQGHKITMEHGVLKVTKGSLVVMKGVRDRNLY-LQGSTVTGA--LAASVDTGADTSRLWH 345
             +G + + E GVLKV  G+L V++G  +R LY L GS+VTG   +++S D  +DT++LWH
Sbjct: 864  KKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWH 923

Query: 346  MRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVHT 525
            MRLGH  E                + K++FCEHC+ GK+T+VKF T +H+T+G +DY H+
Sbjct: 924  MRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHS 983

Query: 526  DVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
            D+WGPS   S GG  Y ++FIDDYSR+ WVY +K K+EVL  F ++K
Sbjct: 984  DLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFK 1030


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  236 bits (603), Expect = 4e-68
 Identities = 118/227 (51%), Positives = 161/227 (70%), Gaps = 5/227 (2%)
 Frame = +1

Query: 1    FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVRE--DVRYVPQLKKNLMSLGVLE 174
            FST+EK  SG V+MGNDH+CQV GIGTVRIKM DG+VR   DVR++P++KKNL+SL  L+
Sbjct: 826  FSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLD 884

Query: 175  SQGHKITMEHGVLKVTKGSLVVMKGVRDRNLY-LQGSTVTGA--LAASVDTGADTSRLWH 345
             +G + + E GVLKV  G+L V++G  +R LY L GS+VTG   +++S D  +DT++LWH
Sbjct: 885  KKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWH 944

Query: 346  MRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVHT 525
            MRLGH  E                + K++FCEHC+ GK+T+VKF T +H+T+G +DY H+
Sbjct: 945  MRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHS 1004

Query: 526  DVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
            D+WGPS   S GG  Y ++FIDDYSR+ WVY +K K+EVL  F ++K
Sbjct: 1005 DLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFK 1051


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score =  228 bits (581), Expect = 4e-67
 Identities = 110/226 (48%), Positives = 154/226 (68%), Gaps = 4/226 (1%)
 Frame = +1

Query: 1   FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
           F+T E +DSGVV+MGND  C++ GIGT++IK  DG ++   +VR++P LK+NL+SLG LE
Sbjct: 304 FTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLE 363

Query: 175 SQGHKITMEHGVLKVTKGSLVVMKGVRDRNLY-LQGSTVTGALAASVD-TGADTSRLWHM 348
           S G K + E GVLKV+KG++V++K  R  +LY LQGS VTG+ A S   +  D ++LWHM
Sbjct: 364 SLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHM 423

Query: 349 RLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVHTD 528
           RLGH  E                  K++FCEHC+ GK+ +V F TA H+T+G LDY+H+D
Sbjct: 424 RLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHSD 483

Query: 529 VWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
           +WGPS+  S GG  Y ++ IDD+SR+ WVY ++HK+E    F +WK
Sbjct: 484 LWGPSKVPSYGGCRYMMTIIDDFSRKVWVYFLRHKNETFPTFKKWK 529


>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
          Length = 778

 Score =  229 bits (584), Expect = 6e-67
 Identities = 111/228 (48%), Positives = 154/228 (67%), Gaps = 6/228 (2%)
 Frame = +1

Query: 1   FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
           F+T+E +  G V+MG+D  C+V GIGTV+IKM DG +R   DVR++P LK++L+S   L+
Sbjct: 283 FATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLD 342

Query: 175 SQGHKITMEHGVLKVTKGSLVVMKG-VRDRNLY-LQGSTVTGALAASVDT--GADTSRLW 342
            +G+K +   G+LKVTKGSLVVMK  ++  NLY L+G+T+ G +AA  D+   +D + LW
Sbjct: 343 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLW 402

Query: 343 HMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVH 522
           HMRLGH  E                  K+ FCEHCI GK  +VKF T+ H TEG+LDYVH
Sbjct: 403 HMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 462

Query: 523 TDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
           +D+WGP++ TS GGA Y ++ +DDYSR+ W Y +KHK++  + F EWK
Sbjct: 463 SDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWK 510


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  230 bits (587), Expect = 5e-66
 Identities = 112/228 (49%), Positives = 153/228 (67%), Gaps = 6/228 (2%)
 Frame = +1

Query: 1    FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
            F+T+E +  G V+MG+D  C+V GIGTV+IKM DG +R   DVR++P LK++L+SL  L+
Sbjct: 317  FATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376

Query: 175  SQGHKITMEHGVLKVTKGSLVVMKG-VRDRNLY-LQGSTVTGALAASVDT--GADTSRLW 342
             +G+K +   G+LKVTKGSLVVMK  ++  NLY LQG+T+ G +A   D+   +D + LW
Sbjct: 377  RKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGNVATVSDSLSNSDATNLW 436

Query: 343  HMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVH 522
            HMRLGH  E                  K+ FCEHCI GK  +VKF T+ H TEG+LDYVH
Sbjct: 437  HMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 496

Query: 523  TDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
            +D+WGP++ TS GGA Y ++ +DDYSR+ W Y +KHK++    F EWK
Sbjct: 497  SDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFNVFKEWK 544


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  229 bits (584), Expect = 1e-65
 Identities = 112/228 (49%), Positives = 155/228 (67%), Gaps = 6/228 (2%)
 Frame = +1

Query: 1   FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVRE--DVRYVPQLKKNLMSLGVLE 174
           F+T+E +  G V+MG+D  C+V GIGTV+IKM DG +R   DVR++P LK++L+SL  L+
Sbjct: 226 FATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLD 285

Query: 175 SQGHKITMEHGVLKVTKGSLVVMKG-VRDRNLY-LQGSTVTGALAASVDT--GADTSRLW 342
            +G+K +   G+LKVTKGSLVVMK  ++  NLY L+G+T+ G +AA  D+   +D + LW
Sbjct: 286 RKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAAVSDSLSNSDATNLW 345

Query: 343 HMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVH 522
           HMRLGH  E                  K+ FCEHCI GK  +VKF T+ H TEG+LDYVH
Sbjct: 346 HMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 405

Query: 523 TDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
           +D+WGP++ TS GGA Y ++ +DDYSR+ W Y +KHK++  + F EWK
Sbjct: 406 SDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWK 453


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1032

 Score =  228 bits (581), Expect = 2e-65
 Identities = 110/226 (48%), Positives = 154/226 (68%), Gaps = 4/226 (1%)
 Frame = +1

Query: 1   FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
           F+T E +DSGVV+MGND  C++ GIGT++IK  DG ++   +VR++P LK+NL+SLG LE
Sbjct: 8   FTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLE 67

Query: 175 SQGHKITMEHGVLKVTKGSLVVMKGVRDRNLY-LQGSTVTGALAASVD-TGADTSRLWHM 348
           S G K + E GVLKV+KG++V++K  R  +LY LQGS VTG+ A S   +  D ++LWHM
Sbjct: 68  SLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHM 127

Query: 349 RLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVHTD 528
           RLGH  E                  K++FCEHC+ GK+ +V F TA H+T+G LDY+H+D
Sbjct: 128 RLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHSD 187

Query: 529 VWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
           +WGPS+  S GG  Y ++ IDD+SR+ WVY ++HK+E    F +WK
Sbjct: 188 LWGPSKVPSYGGCRYMMTIIDDFSRKVWVYFLRHKNETFPTFKKWK 233


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  229 bits (583), Expect = 2e-65
 Identities = 112/228 (49%), Positives = 154/228 (67%), Gaps = 6/228 (2%)
 Frame = +1

Query: 1    FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
            F+T+E +  G V+MG+D  C+V GIGTV+IKM DG +R   DVR++P LK++L+SL  L+
Sbjct: 352  FATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLD 411

Query: 175  SQGHKITMEHGVLKVTKGSLVVMKG-VRDRNLY-LQGSTVTGALAASVDT--GADTSRLW 342
             +G+K +   G+LKVTKGSLVVMK  ++  NLY L+G+T+ G +AA  D+   +D + LW
Sbjct: 412  RKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLW 471

Query: 343  HMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVH 522
            HMRLGH  E                  K+ FCEHCI GK  +VKF T+ H TEG+LDYVH
Sbjct: 472  HMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 531

Query: 523  TDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
            +D+WGP+  TS GGA Y ++ +DDYSR+ W Y +KHK++  + F EWK
Sbjct: 532  SDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWK 579


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  229 bits (583), Expect = 2e-65
 Identities = 112/228 (49%), Positives = 154/228 (67%), Gaps = 6/228 (2%)
 Frame = +1

Query: 1    FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
            F+T+E +  G V+MG+D  C+V GIGTV+IKM DG +R   DVR++P LK++L+SL  L+
Sbjct: 352  FATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLD 411

Query: 175  SQGHKITMEHGVLKVTKGSLVVMKG-VRDRNLY-LQGSTVTGALAASVDT--GADTSRLW 342
             +G+K +   G+LKVTKGSLVVMK  ++  NLY L+G+T+ G +AA  D+   +D + LW
Sbjct: 412  RKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLW 471

Query: 343  HMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVH 522
            HMRLGH  E                  K+ FCEHCI GK  +VKF T+ H TEG+LDYVH
Sbjct: 472  HMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 531

Query: 523  TDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
            +D+WGP+  TS GGA Y ++ +DDYSR+ W Y +KHK++  + F EWK
Sbjct: 532  SDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWK 579


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa]
          Length = 1037

 Score =  228 bits (580), Expect = 2e-65
 Identities = 111/228 (48%), Positives = 153/228 (67%), Gaps = 6/228 (2%)
 Frame = +1

Query: 1   FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
           F+T+E +  G V+MG+D  C+V GIGTV+IKM DG +R   DVR++P LK++L+SL  L+
Sbjct: 134 FATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 193

Query: 175 SQGHKITMEHGVLKVTKGSLVVMKG-VRDRNLY-LQGSTVTGALAASVDT--GADTSRLW 342
            +G+K +   G+LKVTKGSLVVMK  ++  NLY LQG+T+ G +A   D+   +D + LW
Sbjct: 194 CKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDSLSNSDATNLW 253

Query: 343 HMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVH 522
           HMRLGH  E                  K+ FCEHCI GK  +VKF T+ H TEG+LDYVH
Sbjct: 254 HMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 313

Query: 523 TDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
           +D+WGP++ TS GGA Y ++ ++DYSR+ W Y +KHK++    F EWK
Sbjct: 314 SDLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWK 361


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  228 bits (580), Expect = 4e-65
 Identities = 111/228 (48%), Positives = 154/228 (67%), Gaps = 6/228 (2%)
 Frame = +1

Query: 1    FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
            F+T+E +  G V+MG+D  C+V GIGTV+IKM DG +R   DVR++P LK++L+SL  L+
Sbjct: 524  FATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 583

Query: 175  SQGHKITMEHGVLKVTKGSLVVMKG-VRDRNLY-LQGSTVTGALAASVDT--GADTSRLW 342
             +G+K +   G+LKVTKGSLVVMK  ++  NLY L+G+T+ G +AA  D+   +D + LW
Sbjct: 584  RKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLW 643

Query: 343  HMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVH 522
            HMRLGH  E                  K+ FCEHCI GK  +VKF T+ H TEG+LDYVH
Sbjct: 644  HMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 703

Query: 523  TDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
            +D+WGP++ TS GG  Y ++ +DDYSR+ W Y +KHK++  + F EWK
Sbjct: 704  SDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWK 751


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa]
          Length = 1205

 Score =  228 bits (580), Expect = 4e-65
 Identities = 111/228 (48%), Positives = 153/228 (67%), Gaps = 6/228 (2%)
 Frame = +1

Query: 1   FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
           F+T+E +  G V+MG+D  C+V GIGTV+IKM DG +R   DVR++P LK++L+SL  L+
Sbjct: 302 FATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 361

Query: 175 SQGHKITMEHGVLKVTKGSLVVMKG-VRDRNLY-LQGSTVTGALAASVDT--GADTSRLW 342
            +G+K +   G+LKVTKGSLVVMK  ++  NLY LQG+T+ G +A   D+   +D + LW
Sbjct: 362 CKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDSLSNSDATNLW 421

Query: 343 HMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVH 522
           HMRLGH  E                  K+ FCEHCI GK  +VKF T+ H TEG+LDYVH
Sbjct: 422 HMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 481

Query: 523 TDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
           +D+WGP++ TS GGA Y ++ ++DYSR+ W Y +KHK++    F EWK
Sbjct: 482 SDLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWK 529


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  226 bits (576), Expect = 5e-65
 Identities = 110/228 (48%), Positives = 153/228 (67%), Gaps = 6/228 (2%)
 Frame = +1

Query: 1   FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
           F+T+E +  G V+MG+D  C+V GIG V+IKM DG +    DVR++P LK++L+SL  L+
Sbjct: 149 FATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLD 208

Query: 175 SQGHKITMEHGVLKVTKGSLVVMKG-VRDRNLY-LQGSTVTGALAASVDT--GADTSRLW 342
            +G+K +   G+LKVTKGSLVVMK  ++  NLY L+G+T+ G +AA  D+   +D + LW
Sbjct: 209 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLW 268

Query: 343 HMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVH 522
           HMRLGH  E                  K+ FCEHCI GK  +VKF T+ H TEG+LDYVH
Sbjct: 269 HMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 328

Query: 523 TDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
           +D+WGP++ TS GGA Y ++ +DDYSR+ W Y +KHK++  + F EWK
Sbjct: 329 SDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWK 376


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]
          Length = 944

 Score =  226 bits (576), Expect = 5e-65
 Identities = 110/228 (48%), Positives = 153/228 (67%), Gaps = 6/228 (2%)
 Frame = +1

Query: 1   FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
           F+T+E +  G V+MG+D  C+V GIG V+IKM DG +    DVR++P LK++L+SL  L+
Sbjct: 149 FATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLD 208

Query: 175 SQGHKITMEHGVLKVTKGSLVVMKG-VRDRNLY-LQGSTVTGALAASVDT--GADTSRLW 342
            +G+K +   G+LKVTKGSLVVMK  ++  NLY L+G+T+ G +AA  D+   +D + LW
Sbjct: 209 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLW 268

Query: 343 HMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVH 522
           HMRLGH  E                  K+ FCEHCI GK  +VKF T+ H TEG+LDYVH
Sbjct: 269 HMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 328

Query: 523 TDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
           +D+WGP++ TS GGA Y ++ +DDYSR+ W Y +KHK++  + F EWK
Sbjct: 329 SDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWK 376


>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
          Length = 1601

 Score =  228 bits (580), Expect = 5e-65
 Identities = 111/228 (48%), Positives = 154/228 (67%), Gaps = 6/228 (2%)
 Frame = +1

Query: 1    FSTFEKIDSGVVIMGNDHSCQVEGIGTVRIKMCDGVVR--EDVRYVPQLKKNLMSLGVLE 174
            F+T+E +  G V+MG+D  C+V GIGTV+IKM DG +R   DVR++P LK++L+SL  L+
Sbjct: 317  FATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376

Query: 175  SQGHKITMEHGVLKVTKGSLVVMKG-VRDRNLY-LQGSTVTGALAASVDT--GADTSRLW 342
             +G+K +   G+LKVTKGSLVVMK  ++  NLY L+G+T+ G +AA  D+   +D + LW
Sbjct: 377  RKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLW 436

Query: 343  HMRLGHTGEXXXXXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVH 522
            HMRLGH  E                  K+ FCEHCI GK  +VKF T+ H TEG+LDYVH
Sbjct: 437  HMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 496

Query: 523  TDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
            +D+WGP++ TS GG  Y ++ +DDYSR+ W Y +KHK++  + F EWK
Sbjct: 497  SDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWK 544


>gb|AAC12735.1| putative retrovirus-related polyprotein, partial [Lithospermum
           erythrorhizon]
          Length = 244

 Score =  207 bits (528), Expect = 7e-64
 Identities = 105/216 (48%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
 Frame = +1

Query: 37  IMGNDHSCQVEGIGTVRIKMCDGVV--REDVRYVPQLKKNLMSLGVLESQGHKITMEHGV 210
           +MGNDH+C+  G+GT+R+KM DG +    DVR++  L KNL+SL +LE  G KI +E GV
Sbjct: 4   LMGNDHACKTVGVGTIRVKMHDGTIITLNDVRHIQDLHKNLISLRLLEKNGCKIVLEDGV 63

Query: 211 LKVTKGSLVVMKGVRDRNLY-LQGSTVTGALAASVDTGADTSR---LWHMRLGHTGEXXX 378
           LKV + SLVVMKGV   NLY L G+ VTG LA  V    D +    +WHMRLGH  E   
Sbjct: 64  LKVVRRSLVVMKGVSHGNLYPLVGTMVTGDLAVGVVGHKDQTECTMIWHMRLGHMSEKGL 123

Query: 379 XXXXXXXXXXXAKSCKVDFCEHCILGKKTKVKFGTAVHQTEGLLDYVHTDVWGPSQNTSL 558
                       K   ++FCEH + GK  ++KF T+ H++ GLLDYVHTD+WGP++  S 
Sbjct: 124 SLLSGQGLLKNMKKSCMEFCEHWVYGKTHRLKFFTSKHKSRGLLDYVHTDLWGPAKVNSK 183

Query: 559 GGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWK 666
            G+ YFV+F+DDYSR  W+Y +KHK+EV + F +W+
Sbjct: 184 DGSWYFVTFVDDYSRYAWIYFLKHKNEVFDIFKQWR 219