BLASTX nr result

ID: Ophiopogon24_contig00018616 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00018616
         (350 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013443671.1| hypothetical protein MTR_0002s0260 [Medicago...    45   7e-08

>ref|XP_013443671.1| hypothetical protein MTR_0002s0260 [Medicago truncatula]
 gb|KEH17696.1| hypothetical protein MTR_0002s0260 [Medicago truncatula]
          Length = 74

 Score = 44.7 bits (104), Expect(2) = 7e-08
 Identities = 24/36 (66%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
 Frame = -3

Query: 348 NRPIYPPEE--VWFQALIRT-GVHDDNVPLIIHISG 250
           NRPIYPPEE  VWFQ  I+T GV   NVP +IHI G
Sbjct: 6   NRPIYPPEEKFVWFQTPIQTGGVRHANVPWMIHIFG 41



 Score = 39.7 bits (91), Expect(2) = 7e-08
 Identities = 21/28 (75%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = -2

Query: 241 GAGEHIEPSMWLRALTIQIQ-HNYQERA 161
           GA EHIE SMWLRALT Q Q  NYQ RA
Sbjct: 43  GADEHIELSMWLRALTAQAQRRNYQGRA 70


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