BLASTX nr result

ID: Ophiopogon24_contig00018489 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00018489
         (541 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020271850.1| RNA-binding protein 28-like isoform X1 [Aspa...    70   1e-10
ref|XP_020271856.1| RNA-binding protein 28-like isoform X2 [Aspa...    69   2e-10
gb|ONK78783.1| uncharacterized protein A4U43_C02F22360, partial ...    69   3e-10
ref|XP_020254986.1| RNA-binding protein 28-like isoform X2 [Aspa...    69   3e-10
ref|XP_020254988.1| RNA-binding protein 28-like isoform X4 [Aspa...    69   4e-10
ref|XP_020254985.1| RNA-binding protein 28-like isoform X1 [Aspa...    69   4e-10
ref|XP_020254987.1| RNA-binding protein 28-like isoform X3 [Aspa...    68   5e-10

>ref|XP_020271850.1| RNA-binding protein 28-like isoform X1 [Asparagus officinalis]
          Length = 1001

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 57/164 (34%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
 Frame = +1

Query: 55   TEGNADRLVDSRDARNADDNTAGSSNKGRKQKGSVAKRTDSPSKFKQGKSHREGTESGKQ 234
            +EG  D +   ++ +NA           RKQ  S  +  DS +K K G    E T   KQ
Sbjct: 849  SEGTKDNVEVIKEGKNA-----------RKQNISSRRNKDSSAKLKNGSVAAEQTTE-KQ 896

Query: 235  SNNAEKMQKSNVXXXXXXXXXXXXXXXXISKKRKL--QTEEVKPKKEPLLTNSKKRKLQT 408
             +  +K  K                    SKKR+   QT+E++PK+EP+ T S KRK Q 
Sbjct: 897  GDQLKKEAKFT------------------SKKRRKPQQTKELEPKEEPIGT-SNKRKFQN 937

Query: 409  GSEQQPXXXXXXXXXXXXXSVREEEDKLDRLIEQYRNKFSQRSS 540
              ++Q              S RE EDKLD LI++YRN FSQRSS
Sbjct: 938  AGKEQQKETKNAKRRRAGASDREAEDKLDMLIQKYRNTFSQRSS 981


>ref|XP_020271856.1| RNA-binding protein 28-like isoform X2 [Asparagus officinalis]
          Length = 1000

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 56/165 (33%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
 Frame = +1

Query: 55   TEGNADRLVDSRDARNADDNTAGSSNKGRKQKGSVAKRTDSPSKFKQGK-SHREGTESGK 231
            +EG  D +   ++ +NA           RKQ  S  +  DS +K K G  +  + TE G 
Sbjct: 849  SEGTKDNVEVIKEGKNA-----------RKQNISSRRNKDSSAKLKNGSVAAEQTTEKGD 897

Query: 232  QSNNAEKMQKSNVXXXXXXXXXXXXXXXXISKKRKL--QTEEVKPKKEPLLTNSKKRKLQ 405
            Q     K                       SKKR+   QT+E++PK+EP+ T S KRK Q
Sbjct: 898  QLKKEAKFT---------------------SKKRRKPQQTKELEPKEEPIGT-SNKRKFQ 935

Query: 406  TGSEQQPXXXXXXXXXXXXXSVREEEDKLDRLIEQYRNKFSQRSS 540
               ++Q              S RE EDKLD LI++YRN FSQRSS
Sbjct: 936  NAGKEQQKETKNAKRRRAGASDREAEDKLDMLIQKYRNTFSQRSS 980


>gb|ONK78783.1| uncharacterized protein A4U43_C02F22360, partial [Asparagus
            officinalis]
          Length = 925

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 52/139 (37%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
 Frame = +1

Query: 130  NKGRKQKGSVAKRTDSPSKFKQGKSHREGTESGKQSNNAEKMQKSNVXXXXXXXXXXXXX 309
            ++G K   +  +  DS +K K G    E T   KQ    +K  K                
Sbjct: 787  SEGTKDNVTSRRNKDSSAKLKNGPVAAEQTTE-KQRGRLKKEAKFT-------------- 831

Query: 310  XXXISKKRKL--QTEEVKPKKEPLLTNSKKRKLQTGSEQQPXXXXXXXXXXXXXSVREEE 483
                SKKR+   QTEE++PK+EP+ T S KRK Q   ++Q              S RE E
Sbjct: 832  ----SKKRRKPQQTEELEPKEEPIGT-SNKRKFQNAGKEQQKETKNAKRRRAGASDREAE 886

Query: 484  DKLDRLIEQYRNKFSQRSS 540
            DKLD LI++YRNKFSQRSS
Sbjct: 887  DKLDMLIQKYRNKFSQRSS 905


>ref|XP_020254986.1| RNA-binding protein 28-like isoform X2 [Asparagus officinalis]
          Length = 987

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 52/139 (37%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
 Frame = +1

Query: 130  NKGRKQKGSVAKRTDSPSKFKQGKSHREGTESGKQSNNAEKMQKSNVXXXXXXXXXXXXX 309
            ++G K   +  +  DS +K K G    E T   KQ    +K  K                
Sbjct: 849  SEGTKDNVTSRRNKDSSAKLKNGPVAAEQTTE-KQRGRLKKEAKFT-------------- 893

Query: 310  XXXISKKRKL--QTEEVKPKKEPLLTNSKKRKLQTGSEQQPXXXXXXXXXXXXXSVREEE 483
                SKKR+   QTEE++PK+EP+ T S KRK Q   ++Q              S RE E
Sbjct: 894  ----SKKRRKPQQTEELEPKEEPIGT-SNKRKFQNAGKEQQKETKNAKRRRAGASDREAE 948

Query: 484  DKLDRLIEQYRNKFSQRSS 540
            DKLD LI++YRNKFSQRSS
Sbjct: 949  DKLDMLIQKYRNKFSQRSS 967


>ref|XP_020254988.1| RNA-binding protein 28-like isoform X4 [Asparagus officinalis]
          Length = 986

 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 50/139 (35%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
 Frame = +1

Query: 130  NKGRKQKGSVAKRTDSPSKFKQGKSHREGTESGKQSNNAEKMQKSNVXXXXXXXXXXXXX 309
            ++G K   +  +  DS +K K G    E T    Q     K +                 
Sbjct: 846  SEGTKDNVTSRRNKDSSAKLKNGPVAAEQTTEKLQQRGRLKKEAK--------------- 890

Query: 310  XXXISKKRKL--QTEEVKPKKEPLLTNSKKRKLQTGSEQQPXXXXXXXXXXXXXSVREEE 483
                SKKR+   QTEE++PK+EP+ T S KRK Q   ++Q              S RE E
Sbjct: 891  --FTSKKRRKPQQTEELEPKEEPIGT-SNKRKFQNAGKEQQKETKNAKRRRAGASDREAE 947

Query: 484  DKLDRLIEQYRNKFSQRSS 540
            DKLD LI++YRNKFSQRSS
Sbjct: 948  DKLDMLIQKYRNKFSQRSS 966


>ref|XP_020254985.1| RNA-binding protein 28-like isoform X1 [Asparagus officinalis]
          Length = 989

 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 50/139 (35%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
 Frame = +1

Query: 130  NKGRKQKGSVAKRTDSPSKFKQGKSHREGTESGKQSNNAEKMQKSNVXXXXXXXXXXXXX 309
            ++G K   +  +  DS +K K G    E T    Q     K +                 
Sbjct: 849  SEGTKDNVTSRRNKDSSAKLKNGPVAAEQTTEKLQQRGRLKKEAK--------------- 893

Query: 310  XXXISKKRKL--QTEEVKPKKEPLLTNSKKRKLQTGSEQQPXXXXXXXXXXXXXSVREEE 483
                SKKR+   QTEE++PK+EP+ T S KRK Q   ++Q              S RE E
Sbjct: 894  --FTSKKRRKPQQTEELEPKEEPIGT-SNKRKFQNAGKEQQKETKNAKRRRAGASDREAE 950

Query: 484  DKLDRLIEQYRNKFSQRSS 540
            DKLD LI++YRNKFSQRSS
Sbjct: 951  DKLDMLIQKYRNKFSQRSS 969


>ref|XP_020254987.1| RNA-binding protein 28-like isoform X3 [Asparagus officinalis]
          Length = 986

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
 Frame = +1

Query: 88   RDARNADDNTAGSSNKGRKQK-GSVAKRTDSPSKFKQGKSHREGTE----SGKQSNNAEK 252
            ++ R++      ++N+  K+K  ++  +      FK+     EGT+    S +  +++ K
Sbjct: 808  KEHRSSSQTEDANTNRSHKKKLRNMKSKKGHKESFKEYSELSEGTKDNVTSRRNKDSSAK 867

Query: 253  MQKSNVXXXXXXXXXXXXXXXX--ISKKRKL--QTEEVKPKKEPLLTNSKKRKLQTGSEQ 420
            ++   V                   SKKR+   QTEE++PK+EP+ T S KRK Q   ++
Sbjct: 868  LKNGPVAAEQTTEKRGRLKKEAKFTSKKRRKPQQTEELEPKEEPIGT-SNKRKFQNAGKE 926

Query: 421  QPXXXXXXXXXXXXXSVREEEDKLDRLIEQYRNKFSQRSS 540
            Q              S RE EDKLD LI++YRNKFSQRSS
Sbjct: 927  QQKETKNAKRRRAGASDREAEDKLDMLIQKYRNKFSQRSS 966


Top