BLASTX nr result

ID: Ophiopogon24_contig00018488 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00018488
         (369 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK78783.1| uncharacterized protein A4U43_C02F22360, partial ...    73   2e-12
ref|XP_020254986.1| RNA-binding protein 28-like isoform X2 [Aspa...    73   2e-12
ref|XP_020271856.1| RNA-binding protein 28-like isoform X2 [Aspa...    72   4e-12
ref|XP_020254987.1| RNA-binding protein 28-like isoform X3 [Aspa...    72   5e-12
ref|XP_020271850.1| RNA-binding protein 28-like isoform X1 [Aspa...    72   5e-12
ref|XP_020254988.1| RNA-binding protein 28-like isoform X4 [Aspa...    71   7e-12
ref|XP_020254985.1| RNA-binding protein 28-like isoform X1 [Aspa...    71   7e-12

>gb|ONK78783.1| uncharacterized protein A4U43_C02F22360, partial [Asparagus
            officinalis]
          Length = 925

 Score = 73.2 bits (178), Expect = 2e-12
 Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
 Frame = +3

Query: 30   REGTESGKQSNNAEKMQKSNVSSKAEVAKPK---KEQPKAISKKRKL--QTEAVEPKKEP 194
            ++   S +  +++ K++   V+++    K +   K++ K  SKKR+   QTE +EPK+EP
Sbjct: 791  KDNVTSRRNKDSSAKLKNGPVAAEQTTEKQRGRLKKEAKFTSKKRRKPQQTEELEPKEEP 850

Query: 195  LLTNSKKRKLQTGSEQQPXXXXXXXXXXXXXXXXEDEDKLDRLIEQYRNKFSQRSSDK 368
            + T S KRK Q   ++Q                 E EDKLD LI++YRNKFSQRSSDK
Sbjct: 851  IGT-SNKRKFQNAGKEQQKETKNAKRRRAGASDREAEDKLDMLIQKYRNKFSQRSSDK 907


>ref|XP_020254986.1| RNA-binding protein 28-like isoform X2 [Asparagus officinalis]
          Length = 987

 Score = 73.2 bits (178), Expect = 2e-12
 Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
 Frame = +3

Query: 30   REGTESGKQSNNAEKMQKSNVSSKAEVAKPK---KEQPKAISKKRKL--QTEAVEPKKEP 194
            ++   S +  +++ K++   V+++    K +   K++ K  SKKR+   QTE +EPK+EP
Sbjct: 853  KDNVTSRRNKDSSAKLKNGPVAAEQTTEKQRGRLKKEAKFTSKKRRKPQQTEELEPKEEP 912

Query: 195  LLTNSKKRKLQTGSEQQPXXXXXXXXXXXXXXXXEDEDKLDRLIEQYRNKFSQRSSDK 368
            + T S KRK Q   ++Q                 E EDKLD LI++YRNKFSQRSSDK
Sbjct: 913  IGT-SNKRKFQNAGKEQQKETKNAKRRRAGASDREAEDKLDMLIQKYRNKFSQRSSDK 969


>ref|XP_020271856.1| RNA-binding protein 28-like isoform X2 [Asparagus officinalis]
          Length = 1000

 Score = 72.0 bits (175), Expect = 4e-12
 Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
 Frame = +3

Query: 21   NSHREGTESGKQSNNAEKMQKSNVSSKAEVAKPK--KEQPKAISKKRKL--QTEAVEPKK 188
            N+ ++   S +  +++ K++  +V+++    K    K++ K  SKKR+   QT+ +EPK+
Sbjct: 864  NARKQNISSRRNKDSSAKLKNGSVAAEQTTEKGDQLKKEAKFTSKKRRKPQQTKELEPKE 923

Query: 189  EPLLTNSKKRKLQTGSEQQPXXXXXXXXXXXXXXXXEDEDKLDRLIEQYRNKFSQRSSDK 368
            EP+ T S KRK Q   ++Q                 E EDKLD LI++YRN FSQRSSDK
Sbjct: 924  EPIGT-SNKRKFQNAGKEQQKETKNAKRRRAGASDREAEDKLDMLIQKYRNTFSQRSSDK 982


>ref|XP_020254987.1| RNA-binding protein 28-like isoform X3 [Asparagus officinalis]
          Length = 986

 Score = 71.6 bits (174), Expect = 5e-12
 Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
 Frame = +3

Query: 30   REGTESGKQSNNAEKMQKSNVSSKAEVAKPK--KEQPKAISKKRKL--QTEAVEPKKEPL 197
            ++   S +  +++ K++   V+++    K    K++ K  SKKR+   QTE +EPK+EP+
Sbjct: 853  KDNVTSRRNKDSSAKLKNGPVAAEQTTEKRGRLKKEAKFTSKKRRKPQQTEELEPKEEPI 912

Query: 198  LTNSKKRKLQTGSEQQPXXXXXXXXXXXXXXXXEDEDKLDRLIEQYRNKFSQRSSDK 368
             T S KRK Q   ++Q                 E EDKLD LI++YRNKFSQRSSDK
Sbjct: 913  GT-SNKRKFQNAGKEQQKETKNAKRRRAGASDREAEDKLDMLIQKYRNKFSQRSSDK 968


>ref|XP_020271850.1| RNA-binding protein 28-like isoform X1 [Asparagus officinalis]
          Length = 1001

 Score = 71.6 bits (174), Expect = 5e-12
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
 Frame = +3

Query: 21   NSHREGTESGKQSNNAEKMQKSNVSSKAEVAKPK---KEQPKAISKKRKL--QTEAVEPK 185
            N+ ++   S +  +++ K++  +V+++    K     K++ K  SKKR+   QT+ +EPK
Sbjct: 864  NARKQNISSRRNKDSSAKLKNGSVAAEQTTEKQGDQLKKEAKFTSKKRRKPQQTKELEPK 923

Query: 186  KEPLLTNSKKRKLQTGSEQQPXXXXXXXXXXXXXXXXEDEDKLDRLIEQYRNKFSQRSSD 365
            +EP+ T S KRK Q   ++Q                 E EDKLD LI++YRN FSQRSSD
Sbjct: 924  EEPIGT-SNKRKFQNAGKEQQKETKNAKRRRAGASDREAEDKLDMLIQKYRNTFSQRSSD 982

Query: 366  K 368
            K
Sbjct: 983  K 983


>ref|XP_020254988.1| RNA-binding protein 28-like isoform X4 [Asparagus officinalis]
          Length = 986

 Score = 71.2 bits (173), Expect = 7e-12
 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
 Frame = +3

Query: 30   REGTESGKQSNNAEKMQKSNVSSKAEVAKPK-----KEQPKAISKKRKL--QTEAVEPKK 188
            ++   S +  +++ K++   V+++    K +     K++ K  SKKR+   QTE +EPK+
Sbjct: 850  KDNVTSRRNKDSSAKLKNGPVAAEQTTEKLQQRGRLKKEAKFTSKKRRKPQQTEELEPKE 909

Query: 189  EPLLTNSKKRKLQTGSEQQPXXXXXXXXXXXXXXXXEDEDKLDRLIEQYRNKFSQRSSDK 368
            EP+ T S KRK Q   ++Q                 E EDKLD LI++YRNKFSQRSSDK
Sbjct: 910  EPIGT-SNKRKFQNAGKEQQKETKNAKRRRAGASDREAEDKLDMLIQKYRNKFSQRSSDK 968


>ref|XP_020254985.1| RNA-binding protein 28-like isoform X1 [Asparagus officinalis]
          Length = 989

 Score = 71.2 bits (173), Expect = 7e-12
 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
 Frame = +3

Query: 30   REGTESGKQSNNAEKMQKSNVSSKAEVAKPK-----KEQPKAISKKRKL--QTEAVEPKK 188
            ++   S +  +++ K++   V+++    K +     K++ K  SKKR+   QTE +EPK+
Sbjct: 853  KDNVTSRRNKDSSAKLKNGPVAAEQTTEKLQQRGRLKKEAKFTSKKRRKPQQTEELEPKE 912

Query: 189  EPLLTNSKKRKLQTGSEQQPXXXXXXXXXXXXXXXXEDEDKLDRLIEQYRNKFSQRSSDK 368
            EP+ T S KRK Q   ++Q                 E EDKLD LI++YRNKFSQRSSDK
Sbjct: 913  EPIGT-SNKRKFQNAGKEQQKETKNAKRRRAGASDREAEDKLDMLIQKYRNKFSQRSSDK 971


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