BLASTX nr result
ID: Ophiopogon24_contig00018485
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00018485
(358 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP60450.1| Retrovirus-related Pol polyprotein from transposo... 71 7e-13
ref|XP_013746494.2| uncharacterized protein BNAC09G10640D [Brass... 74 7e-13
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo... 73 1e-12
gb|KYP52458.1| Retrovirus-related Pol polyprotein from transposo... 67 9e-12
gb|PKI48888.1| hypothetical protein CRG98_030736 [Punica granatum] 68 1e-11
ref|XP_012084685.1| subtilisin-like protease SBT4.15 [Jatropha c... 70 1e-11
ref|XP_022549646.1| uncharacterized protein LOC111201676, partia... 70 2e-11
gb|PKI37235.1| hypothetical protein CRG98_042387 [Punica granatum] 68 3e-11
ref|XP_015160015.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r... 69 3e-11
gb|PKI57905.1| hypothetical protein CRG98_021693 [Punica granatum] 67 3e-11
gb|PNX76387.1| copia protein [Trifolium pratense] 64 5e-11
gb|PKI56044.1| hypothetical protein CRG98_023562 [Punica granatum] 66 5e-11
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 69 6e-11
gb|KYP59970.1| Retrovirus-related Pol polyprotein from transposo... 68 9e-11
gb|PKI76596.1| hypothetical protein CRG98_002905 [Punica granatum] 67 1e-10
gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense] 67 1e-10
gb|KYP49410.1| Retrovirus-related Pol polyprotein from transposo... 65 1e-10
gb|PKI31537.1| hypothetical protein CRG98_048072 [Punica granatum] 64 2e-10
gb|KYP49356.1| Retrovirus-related Pol polyprotein from transposo... 65 2e-10
gb|KYP54199.1| Retrovirus-related Pol polyprotein from transposo... 65 3e-10
>gb|KYP60450.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 167
Score = 70.9 bits (172), Expect = 7e-13
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGMDV 141
HWIRD LD K L++ K+HTDDNGADM TKALP+ K EVC +AG+ V
Sbjct: 118 HWIRDALDAKLLELAKIHTDDNGADMMTKALPRGKFEVCSEIAGLAV 164
>ref|XP_013746494.2| uncharacterized protein BNAC09G10640D [Brassica napus]
Length = 1347
Score = 73.9 bits (180), Expect = 7e-13
Identities = 32/48 (66%), Positives = 41/48 (85%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGMDVA 144
HWIRDV+ K++++EKVHTDDNGADM TK+LP+ K EVCR +AGM V+
Sbjct: 1298 HWIRDVVASKEVELEKVHTDDNGADMMTKSLPRGKLEVCREIAGMAVS 1345
>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1314
Score = 73.2 bits (178), Expect = 1e-12
Identities = 31/45 (68%), Positives = 39/45 (86%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGM 135
HWIRDVL+ K L+IEK+HT DNGADM TK+LP+EK EVC+ +AG+
Sbjct: 1265 HWIRDVLESKMLKIEKIHTKDNGADMMTKSLPREKIEVCKEVAGL 1309
>gb|KYP52458.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 111
Score = 66.6 bits (161), Expect = 9e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGMDV 141
HWIRD LD K L++ K+HTDDNGADM TKAL +EK EVC + G+ +
Sbjct: 62 HWIRDALDAKLLKLAKIHTDDNGADMMTKALLREKFEVCCEIVGLAI 108
>gb|PKI48888.1| hypothetical protein CRG98_030736 [Punica granatum]
Length = 168
Score = 67.8 bits (164), Expect = 1e-11
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGM 135
HWIRDVL+ K ++++KVHTD+NGADM TK L +EK VCR +AGM
Sbjct: 119 HWIRDVLESKLVKLDKVHTDENGADMMTKTLVREKLHVCRSMAGM 163
>ref|XP_012084685.1| subtilisin-like protease SBT4.15 [Jatropha curcas]
Length = 822
Score = 70.5 bits (171), Expect = 1e-11
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGM 135
HWIRDVL+ K+LQ++K+HTD+NG+DM TK LPK+K E CR AGM
Sbjct: 168 HWIRDVLEMKQLQLKKIHTDENGSDMLTKILPKDKFEYCRLAAGM 212
>ref|XP_022549646.1| uncharacterized protein LOC111201676, partial [Brassica napus]
Length = 2325
Score = 69.7 bits (169), Expect = 2e-11
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGMDVA 144
HWIRDV+ K++++EKVHTDDN ADM TK+LP+ K EVCR +AGM V+
Sbjct: 2276 HWIRDVVASKEVELEKVHTDDNRADMMTKSLPRGKLEVCRVIAGMAVS 2323
Score = 59.7 bits (143), Expect = 7e-08
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEV 114
HWIRDV+ K++++EKVHTDDNGADM TK+LP+ K E+
Sbjct: 1120 HWIRDVVASKEVELEKVHTDDNGADMMTKSLPRGKLEM 1157
>gb|PKI37235.1| hypothetical protein CRG98_042387 [Punica granatum]
Length = 256
Score = 68.2 bits (165), Expect = 3e-11
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGM 135
HWIRDVL+ K ++++KVHTD+NGADM TK L +EK VCR +AGM
Sbjct: 207 HWIRDVLESKLMKLDKVHTDENGADMMTKPLAREKLHVCRSIAGM 251
>ref|XP_015160015.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
from transposon TNT 1-94 [Solanum tuberosum]
Length = 1417
Score = 69.3 bits (168), Expect = 3e-11
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGMDVA 144
HWIRDVL+ K L++EK+HT+DNG DM TKALP+EK E C +AGM ++
Sbjct: 1368 HWIRDVLNSKLLELEKIHTNDNGFDMMTKALPREKFEECCMIAGMAIS 1415
>gb|PKI57905.1| hypothetical protein CRG98_021693 [Punica granatum]
Length = 173
Score = 66.6 bits (161), Expect = 3e-11
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGM 135
HWIRDVL K ++++KVHTD+NGADM TK L +EK VCR +AGM
Sbjct: 124 HWIRDVLKSKLVKLDKVHTDENGADMMTKPLAREKFHVCRSIAGM 168
>gb|PNX76387.1| copia protein [Trifolium pratense]
Length = 94
Score = 64.3 bits (155), Expect = 5e-11
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGM 135
HWIRD+LD K+LQ+EK+HTD+N +DM TK+L K+K E CR G+
Sbjct: 45 HWIRDMLDSKQLQLEKIHTDNNCSDMMTKSLLKDKYEFCRTTTGL 89
>gb|PKI56044.1| hypothetical protein CRG98_023562 [Punica granatum]
Length = 172
Score = 66.2 bits (160), Expect = 5e-11
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGM 135
HWIR+VL+ K ++++KVHTD+NGADM TK L +EK +CR +AGM
Sbjct: 123 HWIRNVLESKLMKVDKVHTDENGADMMTKPLAREKLHICRSIAGM 167
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 68.6 bits (166), Expect = 6e-11
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGMDVA**AMGDRLPLFG 180
+WIRDVL++K L++EK+HTD+NG+DM TK LPK K E CR AG+ P +
Sbjct: 1282 NWIRDVLEKKMLRLEKIHTDENGSDMLTKTLPKGKFEFCREAAGIVD---------PPYS 1332
Query: 181 LEGENC 198
+GENC
Sbjct: 1333 WKGENC 1338
>gb|KYP59970.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 412
Score = 67.8 bits (164), Expect = 9e-11
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGMDV 141
HWIRD LD K L++ K+HTDDNGA+M TKALP+ K E+C +AG+ V
Sbjct: 361 HWIRDALDAKLLELAKIHTDDNGANMMTKALPRGKFEICFEIAGLAV 407
>gb|PKI76596.1| hypothetical protein CRG98_002905 [Punica granatum]
Length = 256
Score = 66.6 bits (161), Expect = 1e-10
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGM 135
HWIRDVL+ K ++++KVHTD NGADM TK L +EK VCR +AGM
Sbjct: 207 HWIRDVLESKLVKLDKVHTDKNGADMMTKPLAREKLHVCRSIAGM 251
>gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense]
Length = 1339
Score = 67.4 bits (163), Expect = 1e-10
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGM 135
HWIRD LD K +++EK+HTDDNG+DM TK LP+ K E CR AG+
Sbjct: 1290 HWIRDALDSKLMELEKIHTDDNGSDMLTKVLPRGKFEFCRMEAGL 1334
>gb|KYP49410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 177
Score = 65.1 bits (157), Expect = 1e-10
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGMDV 141
HWI++VLD K L++ KVHTDDNGADM TKA + K EVC +AGM V
Sbjct: 128 HWIQNVLDAKLLELAKVHTDDNGADMMTKAFARGKFEVCCEIAGMAV 174
>gb|PKI31537.1| hypothetical protein CRG98_048072 [Punica granatum]
Length = 133
Score = 63.9 bits (154), Expect = 2e-10
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGM 135
HWIRDVL+ K ++++KVHT +NG DM TK L KEK VC+ LAGM
Sbjct: 84 HWIRDVLESKLVKLDKVHTAENGTDMMTKPLAKEKLHVCQNLAGM 128
>gb|KYP49356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 209
Score = 65.1 bits (157), Expect = 2e-10
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGMDV 141
H IRD LD K L++ K+HTDDNGADM TKALP+ K E+C +AG+ V
Sbjct: 160 HLIRDALDAKLLKLAKIHTDDNGADMMTKALPRRKFEICCEIAGLAV 206
>gb|KYP54199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 256
Score = 65.5 bits (158), Expect = 3e-10
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 1 HWIRDVLDEKKLQIEKVHTDDNGADMTTKALPKEKNEVCRRLAGMDV 141
H IRD LD K L++ K+HTDDNGADM TKALP+EK E+C +A + V
Sbjct: 207 HLIRDALDAKLLELAKIHTDDNGADMMTKALPREKFEICYEIASLAV 253