BLASTX nr result

ID: Ophiopogon24_contig00018264 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00018264
         (419 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK75006.1| uncharacterized protein A4U43_C03F12330 [Asparagu...    86   1e-16
ref|XP_020256844.1| LOW QUALITY PROTEIN: condensin-2 complex sub...    86   1e-16
ref|XP_017702186.1| PREDICTED: condensin-2 complex subunit H2 is...    55   5e-06
ref|XP_020095468.1| condensin-2 complex subunit H2 [Ananas comosus]    54   1e-05
gb|OAY67303.1| Condensin-2 complex subunit H2 [Ananas comosus]         54   1e-05

>gb|ONK75006.1| uncharacterized protein A4U43_C03F12330 [Asparagus officinalis]
          Length = 638

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = -2

Query: 418 NNTYDMDTELSPNRGKKDDATNFDGREVFLQDDLGSQGSLEDLCRSHLGLLL 263
           NNTYDMDTELSPN GK+DDA  FDG E F QD+LGS+ SLED+CRSHL  LL
Sbjct: 395 NNTYDMDTELSPNCGKRDDAATFDGTEAFTQDNLGSEASLEDICRSHLDALL 446


>ref|XP_020256844.1| LOW QUALITY PROTEIN: condensin-2 complex subunit H2 [Asparagus
           officinalis]
          Length = 665

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = -2

Query: 418 NNTYDMDTELSPNRGKKDDATNFDGREVFLQDDLGSQGSLEDLCRSHLGLLL 263
           NNTYDMDTELSPN GK+DDA  FDG E F QD+LGS+ SLED+CRSHL  LL
Sbjct: 422 NNTYDMDTELSPNCGKRDDAATFDGTEAFTQDNLGSEASLEDICRSHLDALL 473


>ref|XP_017702186.1| PREDICTED: condensin-2 complex subunit H2 isoform X2 [Phoenix
           dactylifera]
          Length = 683

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 29/52 (55%), Positives = 31/52 (59%)
 Frame = -2

Query: 418 NNTYDMDTELSPNRGKKDDATNFDGREVFLQDDLGSQGSLEDLCRSHLGLLL 263
           N  YDMDTE      K DDA+  D  E   QDDL S  +LEDLCRSHL  LL
Sbjct: 435 NIMYDMDTEAPFRHRKSDDASTCDHGEGLTQDDLDSHATLEDLCRSHLDALL 486


>ref|XP_020095468.1| condensin-2 complex subunit H2 [Ananas comosus]
          Length = 677

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/52 (55%), Positives = 34/52 (65%)
 Frame = -2

Query: 418 NNTYDMDTELSPNRGKKDDATNFDGREVFLQDDLGSQGSLEDLCRSHLGLLL 263
           ++ Y MD +L     K D+A NFDG E F QD L S G+LEDLCRSHL  LL
Sbjct: 430 HDLYHMDADLPTYHDKSDNA-NFDGVEGFAQDHLDSHGNLEDLCRSHLDSLL 480


>gb|OAY67303.1| Condensin-2 complex subunit H2 [Ananas comosus]
          Length = 684

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/52 (55%), Positives = 34/52 (65%)
 Frame = -2

Query: 418 NNTYDMDTELSPNRGKKDDATNFDGREVFLQDDLGSQGSLEDLCRSHLGLLL 263
           ++ Y MD +L     K D+A NFDG E F QD L S G+LEDLCRSHL  LL
Sbjct: 430 HDLYHMDADLPTYHDKSDNA-NFDGVEGFAQDHLDSHGNLEDLCRSHLDSLL 480


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