BLASTX nr result

ID: Ophiopogon24_contig00018159 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00018159
         (411 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF63482.1| hypothetical protein [Potamogeton distinctus]          58   2e-08
gb|PON53042.1| hypothetical protein TorRG33x02_306480 [Trema ori...    52   4e-06
gb|PON56974.1| hypothetical protein PanWU01x14_177040 [Parasponi...    52   5e-06
gb|PPS16364.1| hypothetical protein GOBAR_AA04185 [Gossypium bar...    51   1e-05

>dbj|BAF63482.1| hypothetical protein [Potamogeton distinctus]
          Length = 76

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
 Frame = +1

Query: 118 MSSLVDMWTTEFAKLREKGQAIFLPANPSP*A----EENSALSFSILSQKLSTKSRQEAA 285
           MS LVDMWT E AKLREK Q  F   +  P +    ++ S++ + +LSQ L  K +Q   
Sbjct: 1   MSGLVDMWTNEVAKLREKSQEFFKRDSTPPTSHVREKQQSSVRYPVLSQALRIK-KQPPV 59

Query: 286 TLCSEAAVTTMMVECFS 336
           TLCS AAV +M+V+C S
Sbjct: 60  TLCSVAAV-SMIVDCVS 75


>gb|PON53042.1| hypothetical protein TorRG33x02_306480 [Trema orientalis]
          Length = 83

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 38/83 (45%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
 Frame = +1

Query: 118 MSSLVDMWTTEFAKLREKGQAIFL----PANPS--P*AEENSALSFSILSQKLSTKSR-- 273
           MS LVDMWTTE AKL+EKGQ +F     P+N       +E    S S  +   S  SR  
Sbjct: 1   MSGLVDMWTTEMAKLKEKGQTLFSKGSGPSNDGSFDVVKEKGGSSVSASNGLSSAFSRVM 60

Query: 274 --QEAATLCSEAAVTTMMVECFS 336
               A  LCSEA+V +M+VEC S
Sbjct: 61  GANSALALCSEASV-SMIVECSS 82


>gb|PON56974.1| hypothetical protein PanWU01x14_177040 [Parasponia andersonii]
          Length = 83

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 37/83 (44%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
 Frame = +1

Query: 118 MSSLVDMWTTEFAKLREKGQAIFL----PANPS--P*AEENSALSFSILSQKLSTKSR-- 273
           MS LVDMWTTE AKL+EKGQ +F     P+N       +E    S S  +   S  SR  
Sbjct: 1   MSGLVDMWTTEMAKLKEKGQTLFSKGSGPSNAGSFDVVKEKEGSSVSASNGLSSAFSRVM 60

Query: 274 --QEAATLCSEAAVTTMMVECFS 336
               A  LCSEA++ +M+VEC S
Sbjct: 61  GANSALALCSEASI-SMIVECSS 82


>gb|PPS16364.1| hypothetical protein GOBAR_AA04185 [Gossypium barbadense]
          Length = 80

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
 Frame = +1

Query: 118 MSSLVDMWTTEFAKLREKGQAIFLPANPSP*AEENSALSFSILSQKLSTKSR-------- 273
           MS+LVD+W+ E AKLREKGQ +F   +    AE   A+      +K ST+S         
Sbjct: 1   MSALVDIWSDELAKLREKGQTLFSTGSTPTTAESGQAVR---SLKKSSTESAGAFVSRVT 57

Query: 274 --QEAATLCSEAAVTTMMVECFS 336
             +    LCSE ++ +M+VECFS
Sbjct: 58  RVKSPVVLCSEGSI-SMLVECFS 79


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