BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00018034
         (1642 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG66099.1| retrotransposon protein, putative, Ty1-copia subc...   421   e-138
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   434   e-137
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]         436   e-136
gb|AAK39592.1|AC025296_27 putative retrotransposon polyprotein [...   423   e-136
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   435   e-136
emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]         411   e-135
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   434   e-135
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-...   433   e-135
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         433   e-135
gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japo...   427   e-135
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         433   e-135
emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group]        432   e-135
emb|CAE01581.2| OSJNBa0068L06.7 [Oryza sativa Japonica Group]         422   e-135
gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]     431   e-135
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]        433   e-135
gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group...   431   e-135
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     433   e-134
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]         432   e-134
gb|AAX96223.1| retrotransposon protein, putative, Ty1-copia sub-...   431   e-134
gb|ABA98797.2| retrotransposon protein, putative, Ty1-copia subc...   429   e-134

>gb|ABG66099.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 591

 Score =  421 bits (1082), Expect = e-138
 Identities = 200/357 (56%), Positives = 275/357 (77%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G + VI CLYVDDILIFG+++++IN++
Sbjct: 234  QAPKQWHEKFDKTLTSAGFAVNEVDKCVYYRYGGGEGVIPCLYVDDILIFGTNLRVINEV 293

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG    QSHY+EKIL+ F     +P  TPYDP
Sbjct: 294  KSFLSQNFDMKDLGVADVILNIKLIRGENGITHLQSHYVEKILNRFGYIDSKPSPTPYDP 353

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +LT+ TRPDI++AV++LS +TSN    HW  LER+
Sbjct: 354  SLLLRKNKRIARNQLEYSQIIGSLMYLTSVTRPDISFAVSKLSLFTSNLGDDHWRVLERV 413

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEGYSD+NWISD  ++K+T+G+V  LGGGAVSW+  KQT+
Sbjct: 414  MRYLKGTMELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVLTLGGGAVSWRFCKQTI 473

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME E+ ALDT +IEAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 474  LTRSTMEVELTALDTATIEAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSSKDNM 533

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSRTV+ ++S+ MGL P
Sbjct: 534  KSSRHVKRRLKSVRKLKNSRVITLDYIQTARNLADPFTKGLSRTVIDKASKEMGLRP 590


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  434 bits (1115), Expect = e-137
 Identities = 204/357 (57%), Positives = 280/357 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++
Sbjct: 738  QAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEV 797

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 798  KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 857

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 858  SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 917

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 918  MRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 977

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 978  LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNM 1037

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1038 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGLRP 1094


>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
          Length = 1342

 Score =  436 bits (1122), Expect = e-136
 Identities = 207/359 (57%), Positives = 281/359 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G K VILCLYVDDILIFG+++++IN++
Sbjct: 945  QAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGKGVILCLYVDDILIFGTNLEVINEV 1004

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALERI
Sbjct: 1065 SLLLRKNNRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERI 1124

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 1184

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 1185 LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNM 1244

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSPQE 1079
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P E
Sbjct: 1245 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPIE 1303


>gb|AAK39592.1|AC025296_27 putative retrotransposon polyprotein [Oryza sativa Japonica Group]
          Length = 804

 Score =  423 bits (1087), Expect = e-136
 Identities = 197/358 (55%), Positives = 276/358 (77%), Gaps = 1/358 (0%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD  + S GF +N+ D+CVY++  G + VILCLYVDDILIFG+ + +I ++
Sbjct: 446  QAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGGEGVILCLYVDDILIFGTSLNVIEEV 505

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYV-LSQSHYIEKILDNFYSPYCQPVSTPYD 359
            K +LS++F+MKDLGEA++ILN K+ R + G + L QSHY++K+L  F    C+P  TPYD
Sbjct: 506  KDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLVQSHYVDKVLSRFGYSDCKPAPTPYD 565

Query: 360  PNTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALER 539
            PN  L+KN      Q  Y+QIIGSL +L + TRPDI++AV++LSR+ SNP   HW ALER
Sbjct: 566  PNVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDISFAVSKLSRFVSNPGDDHWQALER 625

Query: 540  ILRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQT 719
            ++RYLKGT++YG+HY+GYP VLEGYSD+NWISD+ ++K+ +G+ F LGGGAVSWKS KQT
Sbjct: 626  VMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDANEIKAISGYAFTLGGGAVSWKSCKQT 685

Query: 720  VMARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENAN 899
            ++ RSTME+E+ ALDT ++EAEWL++L++++P+VEKP+PAI ++CD ++ I K +    N
Sbjct: 686  ILTRSTMEAELTALDTATVEAEWLRELLMDLPVVEKPVPAILMNCDNQTVIIKVNSSKDN 745

Query: 900  VKMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            +K +RH+K R KS+R +  + +IALD+V++ +NLAD  TKGL R V+  +SR MGL P
Sbjct: 746  MKSSRHIKRRLKSVRKQKNSGVIALDYVQTARNLADQFTKGLPRNVIDSASREMGLIP 803


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  435 bits (1118), Expect = e-136
 Identities = 205/357 (57%), Positives = 280/357 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G + VILCLYVDDILIFG++I++IN++
Sbjct: 945  QAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINEV 1004

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 1065 SLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 1184

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 1185 LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNNSKDNM 1244

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1245 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]
          Length = 478

 Score =  411 bits (1056), Expect = e-135
 Identities = 191/341 (56%), Positives = 267/341 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++ DG + VILCLYVDDILIFG+++++IN++
Sbjct: 132  QAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHDGGEGVILCLYVDDILIFGTNLEVINEV 191

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 192  KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 251

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 252  SLLLLKNKRIAKNQLEYSQIIGSLMYLASTTRPDISFAVSKLSRFTSNPRDDHWRALERV 311

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLK T+  GLHY+GYP++LE YSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 312  MRYLKRTMELGLHYTGYPAILEEYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 371

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+  LDT+++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 372  LTRSTMEAELTGLDTSTVEAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSSKDNM 431

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGL 1025
            K +RH+K R KS++    + +I LD++++ +NLAD  TKG+
Sbjct: 432  KSSRHVKRRLKSVKKLRNSGVITLDYIQTARNLADPFTKGI 472


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  434 bits (1116), Expect = e-135
 Identities = 204/357 (57%), Positives = 280/357 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++
Sbjct: 945  QAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEV 1004

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 1065 SLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 1184

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 1185 LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNM 1244

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1245 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  433 bits (1114), Expect = e-135
 Identities = 204/357 (57%), Positives = 280/357 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++
Sbjct: 945  QAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEV 1004

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 1065 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 1184

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 1185 LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNM 1244

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1245 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  433 bits (1114), Expect = e-135
 Identities = 204/357 (57%), Positives = 280/357 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++
Sbjct: 945  QAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEV 1004

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 1065 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 1184

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 1185 LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNM 1244

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1245 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japonica Group]
          Length = 1028

 Score =  427 bits (1097), Expect = e-135
 Identities = 198/358 (55%), Positives = 279/358 (77%), Gaps = 1/358 (0%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD  + S GF +N+ D+CVY++  G + VILCLYVDDILIFG+ + +I ++
Sbjct: 670  QAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGGEGVILCLYVDDILIFGTSLNVIEEV 729

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYV-LSQSHYIEKILDNFYSPYCQPVSTPYD 359
            K +LS++F+MKDLGEA++ILN K+ R + G + L QSHY++K+L  F    C+P  TPYD
Sbjct: 730  KDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLVQSHYVDKVLSRFGYSDCKPAPTPYD 789

Query: 360  PNTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALER 539
            P+  L+KN      Q  Y+QIIGSL +L + TRPDI++AV++LSR+ SNP+  HW ALER
Sbjct: 790  PSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDISFAVSKLSRFVSNPEDDHWQALER 849

Query: 540  ILRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQT 719
            ++RYLKGT++YG+HY+GYP VLEGYSD+NWISD+ ++K+T+G+VF LGGGAVSWKS KQT
Sbjct: 850  VMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDADEIKATSGYVFTLGGGAVSWKSCKQT 909

Query: 720  VMARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENAN 899
            ++ RSTME+E+ ALDT ++EAEWL++L++++P+VEKP+PAI ++CD ++ I K +    N
Sbjct: 910  ILTRSTMEAELTALDTATVEAEWLRELLMDLPVVEKPVPAILMNCDNQTVIIKVNSSKDN 969

Query: 900  VKMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            +K +RH+K R KS+R +  + +IALD+V++ +NLAD  TKGL R V+  +SR MGL P
Sbjct: 970  MKSSRHIKRRLKSVRKQKNSEVIALDYVQTARNLADQFTKGLPRNVIDSASREMGLIP 1027


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  433 bits (1113), Expect = e-135
 Identities = 203/357 (56%), Positives = 280/357 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ ++S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++
Sbjct: 945  QAPKQWHEKFDKTLISAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEV 1004

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 1065 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  G HY+GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1125 MRYLKGTVELGFHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 1184

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 1185 LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNM 1244

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1245 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group]
          Length = 1264

 Score =  432 bits (1111), Expect = e-135
 Identities = 203/357 (56%), Positives = 280/357 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++
Sbjct: 907  QAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEV 966

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 967  KSFLSQNFDMKDLGVADIILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1026

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 1027 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1086

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  G+HY+GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1087 MRYLKGTVGLGVHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 1146

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 1147 LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNM 1206

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1207 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1263


>emb|CAE01581.2| OSJNBa0068L06.7 [Oryza sativa Japonica Group]
          Length = 873

 Score =  422 bits (1086), Expect = e-135
 Identities = 201/357 (56%), Positives = 277/357 (77%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY+   G K VILCLYVDDILIFG+++++IN++
Sbjct: 516  QAPKQWHEKFDKTLTSAGFAVNEADKCVYYCHGGGKEVILCLYVDDILIFGTNLEVINEV 575

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFD KDLG A++ILN +++R  NG  L QSHY+EKIL++F     +P  TPYDP
Sbjct: 576  KSFLSQNFDTKDLGVADVILNIELIRGENGITLLQSHYVEKILNHFGYIDSKPSPTPYDP 635

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 636  SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 695

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLK T+  GLHY+GY +VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S+KQT+
Sbjct: 696  MRYLKVTMELGLHYTGYHAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSSKQTI 755

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEW++DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 756  LTRSTMEAELTALDTATVEAEWMRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSYKDNM 815

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R      +I LD++++ KNLAD  TKGLSR V+  +S+ MGL P
Sbjct: 816  KSSRHVKRRLKSVRKLRNFGVITLDYIQTAKNLADPFTKGLSRNVIDNASKEMGLRP 872


>gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1229

 Score =  431 bits (1109), Expect = e-135
 Identities = 203/357 (56%), Positives = 279/357 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++
Sbjct: 872  QAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEV 931

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FL QNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 932  KSFLPQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 991

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 992  SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1051

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1052 MRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 1111

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 1112 LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNM 1171

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1172 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1228


>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score =  433 bits (1113), Expect = e-135
 Identities = 204/357 (57%), Positives = 280/357 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++
Sbjct: 917  QAPKQWHEKFDKTLTSAGFGVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEV 976

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 977  KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1036

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 1037 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1096

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1097 MRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 1156

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 1157 LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNM 1216

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1217 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1273


>gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|ABF99553.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1224

 Score =  431 bits (1108), Expect = e-135
 Identities = 205/357 (57%), Positives = 277/357 (77%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+I+ S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++
Sbjct: 867  QAPKQWHEKFDKILTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEV 926

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 927  KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 986

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 987  SLLLHKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1046

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEGYSD+NWISD   +K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1047 MRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDKIKATSGYVFTLGGGAVSWRSCKQTI 1106

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD +  I K +    N+
Sbjct: 1107 LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQMVIVKVNSSKDNM 1166

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+   S+ MGL P
Sbjct: 1167 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNVSKEMGLRP 1223


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  433 bits (1114), Expect = e-134
 Identities = 204/357 (57%), Positives = 280/357 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++
Sbjct: 1034 QAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEV 1093

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 1094 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1153

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 1154 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1213

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1214 MRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 1273

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 1274 LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNM 1333

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1334 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1390


>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  432 bits (1110), Expect = e-134
 Identities = 203/357 (56%), Positives = 279/357 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++
Sbjct: 945  QAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEV 1004

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW  LER+
Sbjct: 1065 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRVLERV 1124

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 1184

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 1185 LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNM 1244

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1245 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301


>gb|AAX96223.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA92679.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  431 bits (1109), Expect = e-134
 Identities = 203/357 (56%), Positives = 279/357 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++++IN++
Sbjct: 945  QAPKQWHEKFDKTLTSVGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEV 1004

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 1065 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEGYSD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1125 MRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 1184

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL++++P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 1185 LTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNM 1244

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  T GLSR V+  +S+ MGL P
Sbjct: 1245 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTMGLSRNVIDNASKEMGLRP 1301


>gb|ABA98797.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1243

 Score =  429 bits (1104), Expect = e-134
 Identities = 204/357 (57%), Positives = 279/357 (78%)
 Frame = +3

Query: 3    QAPKQWHMKFDEIILSYGFEINQTDECVYHKLDGVKIVILCLYVDDILIFGSDIQIINDI 182
            QAPKQWH KFD+ + S GF +N+ D+CVY++  G + VILCLYVDDILIFG+++Q+IN++
Sbjct: 886  QAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLQVINEV 945

Query: 183  KHFLSQNFDMKDLGEAELILNTKILRKNNGYVLSQSHYIEKILDNFYSPYCQPVSTPYDP 362
            K FLSQNFDMKDLG A++ILN K++R  NG  L QSHY+EKIL+ F     +P  TPYDP
Sbjct: 946  KSFLSQNFDMKDLGVADVILNIKLIRGENGINLLQSHYVEKILNRFGYIDSKPSPTPYDP 1005

Query: 363  NTHLKKNTGHPVLQREYAQIIGSLGFLTNYTRPDIAYAVNRLSRYTSNPDQSHWTALERI 542
            +  L+KN      Q EY+QIIGSL +L + TRPDI++AV++LSR+TSNP   HW ALER+
Sbjct: 1006 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1065

Query: 543  LRYLKGTLTYGLHYSGYPSVLEGYSDANWISDSVDVKSTTGFVFLLGGGAVSWKSTKQTV 722
            +RYLKGT+  GLHY+GYP+VLEG+SD+NWISD  ++K+T+G+VF LGGGAVSW+S KQT+
Sbjct: 1066 IRYLKGTVELGLHYTGYPAVLEGHSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTI 1125

Query: 723  MARSTMESEMIALDTTSIEAEWLKDLMIEIPLVEKPLPAISIHCDCRSAIDKCHQENANV 902
            + RSTME+E+ ALDT ++EAEWL+DL+++ P+VEKP+PAI ++CD ++ I K +    N+
Sbjct: 1126 LTRSTMEAELTALDTATVEAEWLRDLLMDQPVVEKPVPAILMNCDNQTVIVKVNSSKDNM 1185

Query: 903  KMNRHLKVRHKSLRYKMKNHIIALDFVRSEKNLADHLTKGLSRTVVLESSRGMGLSP 1073
            K +RH+K R KS+R    + +I LD++++ +NLAD  TKGLSR V+  +S+ MGL P
Sbjct: 1186 KSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1242