BLASTX nr result
ID: Ophiopogon24_contig00018026
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00018026
(413 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020102569.1| uncharacterized protein LOC109720094 [Ananas... 54 6e-10
gb|OAY69027.1| LINE-1 retrotransposable element ORF2 protein [An... 47 1e-08
gb|OAY73430.1| LINE-1 reverse transcriptase [Ananas comosus] 43 2e-07
gb|OAY85076.1| Transposon TX1 uncharacterized 149 kDa protein [A... 41 5e-07
ref|XP_020084915.1| uncharacterized protein LOC109707794 [Ananas... 46 8e-07
gb|ABA99487.1| retrotransposon protein, putative, unclassified [... 56 2e-06
emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group] >g... 54 4e-06
gb|ABA96413.2| hypothetical protein LOC_Os12g04570 [Oryza sativa... 54 7e-06
ref|XP_020112154.1| uncharacterized protein LOC109726772 [Ananas... 47 9e-06
gb|OAY76316.1| putative ribonuclease H protein [Ananas comosus] 44 9e-06
ref|XP_014757848.1| PREDICTED: uncharacterized mitochondrial pro... 54 1e-05
>ref|XP_020102569.1| uncharacterized protein LOC109720094 [Ananas comosus]
Length = 1027
Score = 53.5 bits (127), Expect(2) = 6e-10
Identities = 25/62 (40%), Positives = 33/62 (53%)
Frame = -1
Query: 251 GGICILDLERMNKVLLGKWIWKLVDKPDLAWCRSVRSRYYHNKTLRDVSCHSHGLSSIWN 72
GG+ ILDLE MN LL KW W+ +P L+WC V++ YY ++ S W
Sbjct: 752 GGLGILDLESMNAALLSKWWWRFFTEPQLSWCNLVKTLYYTRRSPLHEGTGFVPHSQWWK 811
Query: 71 GV 66
GV
Sbjct: 812 GV 813
Score = 37.7 bits (86), Expect(2) = 6e-10
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -2
Query: 388 FMSFYLLPSWV--RKNDRLRSFLRKGDKECKGFACLVKWKEVCKTKELG 248
++S + P WV R R+F KG + ACLV WK +CK+K G
Sbjct: 704 YLSVFKAPKWVLLRIEALHRAFFWKGCSKISRGACLVNWKSICKSKRDG 752
>gb|OAY69027.1| LINE-1 retrotransposable element ORF2 protein [Ananas comosus]
Length = 753
Score = 46.6 bits (109), Expect(2) = 1e-08
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = -1
Query: 251 GGICILDLERMNKVLLGKWIWKLVDKPDLAWCRSVRSRYYHNKTLRDVSCHSHGLSSIWN 72
GG+ +LDL+ MN LL KW WK +P L W + + YY + S W
Sbjct: 506 GGLGVLDLDTMNHALLTKWWWKFFSEPHLQWNKLIHDLYYRRRRPLKEGRSFRPSSYWWK 565
Query: 71 GV 66
GV
Sbjct: 566 GV 567
Score = 40.0 bits (92), Expect(2) = 1e-08
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -2
Query: 388 FMSFYLLPSWV--RKNDRLRSFLRKGDKECKGFACLVKWKEVCKTKELG 248
F+S + P WV R R F G G CLV WK +CK+K+ G
Sbjct: 458 FLSMFKAPKWVIARIEALRRDFFWNGGNNAPGKGCLVAWKNICKSKKKG 506
>gb|OAY73430.1| LINE-1 reverse transcriptase [Ananas comosus]
Length = 717
Score = 43.1 bits (100), Expect(2) = 2e-07
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = -1
Query: 251 GGICILDLERMNKVLLGKWIWKLVDKPDLAWCRSVRSRYY 132
GG+ ILDL MN+ LL KW WKL+ P+ W + + + +Y
Sbjct: 458 GGLGILDLASMNQALLVKWWWKLLTMPNPQWNKLIHALFY 497
Score = 39.3 bits (90), Expect(2) = 2e-07
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -2
Query: 388 FMSFYLLPSWVRKNDRL--RSFLRKGDKECKGFACLVKWKEVCKTKELG 248
F++ + P+WV K + R F KG+ G CLV WK VC++KE G
Sbjct: 410 FLTVFHTPNWVVKRIEVLRRDFFWKGNTGPPGKGCLVAWKCVCRSKEEG 458
>gb|OAY85076.1| Transposon TX1 uncharacterized 149 kDa protein [Ananas comosus]
Length = 1091
Score = 40.8 bits (94), Expect(2) = 5e-07
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -2
Query: 394 SIFMSFYLLPSWVRKN-DRLR-SFLRKGDKECKGFACLVKWKEVCKTKELG 248
S F S + LP WV + D++R F +G K GF CLV W +VC+ K G
Sbjct: 735 SHFCSIFRLPGWVVNSIDKIRRGFFWRGRKLTNGFHCLVNWGQVCRPKLWG 785
Score = 40.4 bits (93), Expect(2) = 5e-07
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = -1
Query: 251 GGICILDLERMNKVLLGKWIWKLVDKPDLAWCRSVRSRYYHNKTLRDVSCHSHGLSSIWN 72
GG+ I +L+ MN LL K +WK + P L W + + ++Y + +W
Sbjct: 785 GGLGIRNLQAMNSALLMKGLWKFYNSPHLPWVKLLTEKHYRYRQPATGDNIPSRCCPMWR 844
Query: 71 GVXXXXXXXXXXXXXXLGNGEDT 3
G+ +GNG+ T
Sbjct: 845 GILSTTAPFHASVFFSIGNGKGT 867
>ref|XP_020084915.1| uncharacterized protein LOC109707794 [Ananas comosus]
Length = 873
Score = 46.2 bits (108), Expect(2) = 8e-07
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = -1
Query: 251 GGICILDLERMNKVLLGKWIWKLVDKPDLAWCRSVRSRYYHNKTLRDVSCHSHGLSSIWN 72
GG+ I D+E MNK LL KW W+ ++ L W R V + YY + L + S W
Sbjct: 612 GGLGIKDMEAMNKALLTKWWWRFFNERHLLWRRLVTALYYTRRRLLNEGRSFRPYSQWWR 671
Query: 71 GV 66
V
Sbjct: 672 SV 673
Score = 34.3 bits (77), Expect(2) = 8e-07
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -2
Query: 388 FMSFYLLPSWV--RKNDRLRSFLRKGDKECKGFACLVKWKEVCKTKELG 248
+ + + WV R R+F KG G +CLV WK +CK+K G
Sbjct: 564 YFAIFKASQWVLNRIEALRRAFFWKGCSNISGGSCLVSWKIICKSKREG 612
>gb|ABA99487.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1627
Score = 56.2 bits (134), Expect = 2e-06
Identities = 31/83 (37%), Positives = 43/83 (51%)
Frame = -1
Query: 251 GGICILDLERMNKVLLGKWIWKLVDKPDLAWCRSVRSRYYHNKTLRDVSCHSHGLSSIWN 72
GG+ ILDL+ MNK LLGKW+W L + L W +R++Y KTL + H +G S W+
Sbjct: 1285 GGLGILDLDVMNKALLGKWLWNLENTEGL-WQDMLRNKYLKKKTLTQIK-HKNGDSHFWS 1342
Query: 71 GVXXXXXXXXXXXXXXLGNGEDT 3
+ + NGE T
Sbjct: 1343 SLMEIKELFLRFCDKKVENGEST 1365
>emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group]
emb|CAE03883.2| OSJNBb0015N08.11 [Oryza sativa Japonica Group]
Length = 1026
Score = 54.3 bits (129), Expect(2) = 4e-06
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = -1
Query: 251 GGICILDLERMNKVLLGKWIWKLVDKPDLAWCRSVRSRYYHNKTLRDVSCHSHGLSSIWN 72
GG+ +LDLE MNK +LGKWIW+L + + W + ++Y +K L + + G S W
Sbjct: 657 GGLGVLDLEAMNKAMLGKWIWRL-ENEEGWWQEIIYAKYCSDKPLSGLRLKA-GSSHFWQ 714
Query: 71 GVXXXXXXXXXXXXXXLGNGEDT 3
GV +GNGE T
Sbjct: 715 GVMEVKDDFFSFCTKIVGNGEKT 737
Score = 23.9 bits (50), Expect(2) = 4e-06
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 408 LSSIPLYLCLFICCPLGLGRMID 340
LSS+P+Y+ F P G+ ID
Sbjct: 603 LSSVPMYMISFYRLPKGVQERID 625
>gb|ABA96413.2| hypothetical protein LOC_Os12g04570 [Oryza sativa Japonica Group]
Length = 236
Score = 53.9 bits (128), Expect = 7e-06
Identities = 30/83 (36%), Positives = 42/83 (50%)
Frame = -1
Query: 251 GGICILDLERMNKVLLGKWIWKLVDKPDLAWCRSVRSRYYHNKTLRDVSCHSHGLSSIWN 72
GG+ ILDLE MN +LGKWIW+L ++ W + +Y HNK L + G+S W
Sbjct: 46 GGLGILDLEIMNCAMLGKWIWRLENERGW-WQDILTKKYCHNKVLSGLKV-KPGVSHFWQ 103
Query: 71 GVXXXXXXXXXXXXXXLGNGEDT 3
G+ +GNG +T
Sbjct: 104 GIMDVKEMFYKFCTKVVGNGRNT 126
>ref|XP_020112154.1| uncharacterized protein LOC109726772 [Ananas comosus]
Length = 748
Score = 46.6 bits (109), Expect(2) = 9e-06
Identities = 29/83 (34%), Positives = 33/83 (39%)
Frame = -1
Query: 251 GGICILDLERMNKVLLGKWIWKLVDKPDLAWCRSVRSRYYHNKTLRDVSCHSHGLSSIWN 72
GG+ ILD+ MN LL KW WK P L W R +R YY + S W
Sbjct: 406 GGLGILDVRTMNCALLTKWWWKFHIAPQLQWNRVIRDLYYQRRRPLMEGSSFRPQSYWWK 465
Query: 71 GVXXXXXXXXXXXXXXLGNGEDT 3
GV LGNG T
Sbjct: 466 GVLSLKLIFKWGSNYILGNGCST 488
Score = 30.4 bits (67), Expect(2) = 9e-06
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 14/51 (27%)
Frame = -2
Query: 358 VRKNDRLRSFLRKGDKEC--------------KGFACLVKWKEVCKTKELG 248
VR+ D L FL EC KG CL+ WK VCK+K G
Sbjct: 356 VRQGDPLSPFLFLMVAECLTRLANEALRNNLLKGKGCLLAWKNVCKSKSEG 406
>gb|OAY76316.1| putative ribonuclease H protein [Ananas comosus]
Length = 237
Score = 44.3 bits (103), Expect(2) = 9e-06
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = -1
Query: 251 GGICILDLERMNKVLLGKWIWKLVDKPDLAWCRSVRSRYY 132
GG+ ILDL MN+ LL KW WK + P+L W + + + +Y
Sbjct: 168 GGLGILDLASMNQALLVKWWWKFLTMPNLQWNKLIHALFY 207
Score = 32.7 bits (73), Expect(2) = 9e-06
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 337 RSFLRKGDKECKGFACLVKWKEVCKTKELG 248
R F KG+ G CLV WK VC++KE G
Sbjct: 139 RDFFWKGNTGPPGKGCLVAWKCVCRSKEEG 168
>ref|XP_014757848.1| PREDICTED: uncharacterized mitochondrial protein AtMg00310-like
[Brachypodium distachyon]
Length = 228
Score = 53.5 bits (127), Expect = 1e-05
Identities = 26/82 (31%), Positives = 43/82 (52%)
Frame = -1
Query: 251 GGICILDLERMNKVLLGKWIWKLVDKPDLAWCRSVRSRYYHNKTLRDVSCHSHGLSSIWN 72
GG+ D++ N+ LL + +W+L+DKPD R ++++YY N +L D + + SS W
Sbjct: 145 GGLGFKDMQTFNQALLSRQVWRLIDKPDSLCARVLKAKYYPNGSLVD-TVFTGNASSSWQ 203
Query: 71 GVXXXXXXXXXXXXXXLGNGED 6
+ +GNGED
Sbjct: 204 AIEFGHDLVKNGIIWRIGNGED 225