BLASTX nr result

ID: Ophiopogon24_contig00017843 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00017843
         (418 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020276222.1| U-box domain-containing protein 12 [Asparagu...    98   6e-21
ref|XP_008789544.1| PREDICTED: U-box domain-containing protein 1...    65   2e-09
ref|XP_010940632.1| PREDICTED: U-box domain-containing protein 1...    64   6e-09
ref|XP_008800544.1| PREDICTED: U-box domain-containing protein 1...    62   1e-08
ref|XP_010935715.1| PREDICTED: U-box domain-containing protein 1...    62   2e-08
ref|XP_010935712.1| PREDICTED: U-box domain-containing protein 1...    62   2e-08
gb|PKA65409.1| U-box domain-containing protein 12 [Apostasia she...    60   1e-07
gb|OAY75794.1| U-box domain-containing protein 12 [Ananas comosus]     55   7e-06

>ref|XP_020276222.1| U-box domain-containing protein 12 [Asparagus officinalis]
 gb|ONK79507.1| uncharacterized protein A4U43_C01F7060 [Asparagus officinalis]
          Length = 632

 Score = 97.8 bits (242), Expect = 6e-21
 Identities = 56/114 (49%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
 Frame = -3

Query: 341 MAPAVDEDESSDRRIGAAAESLSKIVCEISNLPEHRGPXXXXXXXXXXXXXXLGPLFDEI 162
           M PA ++DES  R I    +SLSK+ CEIS+LPE RGP              L PLFDEI
Sbjct: 1   MGPAAEDDESEARGI-RLLDSLSKLACEISSLPEFRGPFRRSCCDLARRAKLLSPLFDEI 59

Query: 161 RDGIRD-GSVEGVGIGAVSSXXXXXXXXXXXXXLVNEGSKLHQAMQREGYAIKF 3
           RDGI D GSVEG+ +GA+S+              +N+GSKLHQA++ E YAIKF
Sbjct: 60  RDGIGDEGSVEGIEVGALSALLDALGSAKDLLLSINQGSKLHQALKGESYAIKF 113


>ref|XP_008789544.1| PREDICTED: U-box domain-containing protein 12 [Phoenix dactylifera]
          Length = 634

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 44/116 (37%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
 Frame = -3

Query: 341 MAPAVDEDE-SSDRRIG--AAAESLSKIVCEISNLPEHRGPXXXXXXXXXXXXXXLGPLF 171
           M P  DE+E  S   +G  A  E++S+ V EI+ LPE RGP              L PLF
Sbjct: 1   MGPTTDEEEPESGGGLGGIAVVETVSRAVAEIAGLPESRGPLRRLCCDLTRRVKLLSPLF 60

Query: 170 DEIRDGIRDGSVEGVGIGAVSSXXXXXXXXXXXXXLVNEGSKLHQAMQREGYAIKF 3
           DE+RDG   GSV      A++S              VN+GSK +QA+QRE +  +F
Sbjct: 61  DELRDG-GGGSVREFQAQALASLHDALVEAKELLVSVNDGSKFYQALQREKFVYQF 115


>ref|XP_010940632.1| PREDICTED: U-box domain-containing protein 12 [Elaeis guineensis]
          Length = 634

 Score = 63.5 bits (153), Expect = 6e-09
 Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
 Frame = -3

Query: 341 MAPAVDEDE-SSDRRIG--AAAESLSKIVCEISNLPEHRGPXXXXXXXXXXXXXXLGPLF 171
           M P  DE+E  +   +G  AA E++S+ V E++ LPE RGP              L PLF
Sbjct: 1   MGPTTDEEEPETGGGLGGNAAVETVSRAVAEVAGLPESRGPLRRLCCDLARRVKLLSPLF 60

Query: 170 DEIRDGIRDGSVEGVGIGAVSSXXXXXXXXXXXXXLVNEGSKLHQAMQREGYAIKF 3
           DE+RDG   GS+      A++S              VN+GSKL+QA+QRE +  +F
Sbjct: 61  DELRDG-GGGSLGEFQAQALASLHGALVDAKELLVSVNDGSKLYQALQREKFVHQF 115


>ref|XP_008800544.1| PREDICTED: U-box domain-containing protein 12-like [Phoenix
           dactylifera]
          Length = 634

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 43/116 (37%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
 Frame = -3

Query: 341 MAPAVDED--ESSDRRIG-AAAESLSKIVCEISNLPEHRGPXXXXXXXXXXXXXXLGPLF 171
           M P  DE+  E+   R G A  E++S  V EI+ LPE RGP              LGPLF
Sbjct: 1   MGPTTDEEKPENGGGRGGIAVVEAVSTAVAEIAGLPESRGPLRRLCCDLARRVKLLGPLF 60

Query: 170 DEIRDGIRDGSVEGVGIGAVSSXXXXXXXXXXXXXLVNEGSKLHQAMQREGYAIKF 3
           DE+RDG   GS+       ++S              V++GSKL+QA+QRE +  +F
Sbjct: 61  DELRDG-GGGSLGEFQARTIASLHGALVRAKELLVSVDDGSKLYQALQRETFVYRF 115


>ref|XP_010935715.1| PREDICTED: U-box domain-containing protein 12 isoform X3 [Elaeis
           guineensis]
          Length = 563

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 47/124 (37%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
 Frame = -3

Query: 341 MAPAVDEDE---SSDRRIGAAAESLSKIVCEISNLPEHRGPXXXXXXXXXXXXXXLGPLF 171
           M P  D ++    SDR    A E++S  V EI+ LPE RGP              LGPLF
Sbjct: 1   MGPTTDGEKPENGSDRGGIGAVEAVSTAVAEIAGLPESRGPLRRLCCDLARRVKLLGPLF 60

Query: 170 DEIRDGIRDGSVEGVGIG--------AVSSXXXXXXXXXXXXXLVNEGSKLHQAMQREGY 15
           DE+RDG  DGS  G G G        A++S              V++GS+L QA+QRE +
Sbjct: 61  DELRDG-GDGSGGGGGGGSLGEFQARALASLHGALVEAKDLLVSVDDGSRLSQALQREQF 119

Query: 14  AIKF 3
             KF
Sbjct: 120 VGKF 123


>ref|XP_010935712.1| PREDICTED: U-box domain-containing protein 12 isoform X1 [Elaeis
           guineensis]
          Length = 642

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 47/124 (37%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
 Frame = -3

Query: 341 MAPAVDEDE---SSDRRIGAAAESLSKIVCEISNLPEHRGPXXXXXXXXXXXXXXLGPLF 171
           M P  D ++    SDR    A E++S  V EI+ LPE RGP              LGPLF
Sbjct: 1   MGPTTDGEKPENGSDRGGIGAVEAVSTAVAEIAGLPESRGPLRRLCCDLARRVKLLGPLF 60

Query: 170 DEIRDGIRDGSVEGVGIG--------AVSSXXXXXXXXXXXXXLVNEGSKLHQAMQREGY 15
           DE+RDG  DGS  G G G        A++S              V++GS+L QA+QRE +
Sbjct: 61  DELRDG-GDGSGGGGGGGSLGEFQARALASLHGALVEAKDLLVSVDDGSRLSQALQREQF 119

Query: 14  AIKF 3
             KF
Sbjct: 120 VGKF 123


>gb|PKA65409.1| U-box domain-containing protein 12 [Apostasia shenzhenica]
          Length = 658

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 41/113 (36%), Positives = 50/113 (44%)
 Frame = -3

Query: 341 MAPAVDEDESSDRRIGAAAESLSKIVCEISNLPEHRGPXXXXXXXXXXXXXXLGPLFDEI 162
           M  A  E+E   R I     SLS +V E+S LP+ RGP              + PLFDE+
Sbjct: 1   MGSAAGEEEPEGRGISVVG-SLSAVVGEVSGLPDGRGPLQRECCDLARRVKLMSPLFDEL 59

Query: 161 RDGIRDGSVEGVGIGAVSSXXXXXXXXXXXXXLVNEGSKLHQAMQREGYAIKF 3
           RD   DG V    I A+S               VN+ SKLHQA Q + Y   F
Sbjct: 60  RDCTGDGFVGENEIRALSELLDALVAARELLRSVNDASKLHQAFQVDKYLNNF 112


>gb|OAY75794.1| U-box domain-containing protein 12 [Ananas comosus]
          Length = 649

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)
 Frame = -3

Query: 341 MAPAVDEDESSDRRIG-------------AAAESLSKIVCEISNLPEHRGPXXXXXXXXX 201
           M P  D++E+    +G             AA E+ +++V E+S LPE RGP         
Sbjct: 1   MDPTTDDEEAGISGVGGGGGVRGESSAAEAAVEAAARVVGELSGLPESRGPLRRLCGDLA 60

Query: 200 XXXXXLGPLFDEIRDGIRDGSVEGVG---IGAVSSXXXXXXXXXXXXXLVNEGSKLHQAM 30
                L PL DE+RD     +   +G   + ++++              V +GSK++QA+
Sbjct: 61  RRVKLLAPLLDELRDCAAAAAAGSLGEREVRSLAALRGALVSAKDLLRSVYDGSKIYQAL 120

Query: 29  QREGYAIKF 3
           QRE +A KF
Sbjct: 121 QRENFASKF 129


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