BLASTX nr result
ID: Ophiopogon24_contig00017779
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00017779
(611 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010039339.1| PREDICTED: sm-like protein LSM36B isoform X1... 77 6e-15
ref|XP_010039336.1| PREDICTED: sm-like protein LSM36B isoform X1... 75 4e-14
ref|XP_010066109.1| PREDICTED: sm-like protein LSM36B isoform X1... 75 4e-14
gb|KCW63906.1| hypothetical protein EUGRSUZ_G01588 [Eucalyptus g... 75 4e-14
gb|POF23328.1| u6 snrna-associated sm-like protein lsm6 [Quercus... 66 8e-11
gb|POF15953.1| sm-like protein lsm36b [Quercus suber] 64 4e-10
ref|XP_010051854.1| PREDICTED: sm-like protein LSM36B [Eucalyptu... 63 1e-09
gb|EOA24924.1| hypothetical protein CARUB_v10018215mg [Capsella ... 64 1e-09
dbj|GAU40522.1| hypothetical protein TSUD_92940 [Trifolium subte... 62 3e-09
ref|XP_002950049.1| hypothetical protein VOLCADRAFT_60073 [Volvo... 61 5e-09
dbj|GAX82099.1| hypothetical protein CEUSTIGMA_g9527.t1 [Chlamyd... 61 6e-09
gb|OMO79213.1| hypothetical protein CCACVL1_13845 [Corchorus cap... 61 6e-09
dbj|GAU17248.1| hypothetical protein TSUD_109630 [Trifolium subt... 61 6e-09
gb|KRH40502.1| hypothetical protein GLYMA_09G262700 [Glycine max] 61 6e-09
ref|XP_022942161.1| sm-like protein LSM36B isoform X2 [Cucurbita... 61 6e-09
ref|XP_005851037.1| hypothetical protein CHLNCDRAFT_34269 [Chlor... 61 7e-09
ref|XP_002502738.1| predicted protein [Micromonas commoda] >gi|2... 61 7e-09
ref|XP_002980839.1| hypothetical protein SELMODRAFT_268399 [Sela... 61 7e-09
ref|XP_019465277.1| PREDICTED: sm-like protein LSM6A [Lupinus an... 61 7e-09
ref|XP_018444714.1| PREDICTED: sm-like protein LSM36B [Raphanus ... 61 7e-09
>ref|XP_010039339.1| PREDICTED: sm-like protein LSM36B isoform X1 [Eucalyptus grandis]
gb|KCW46063.1| hypothetical protein EUGRSUZ_L00039 [Eucalyptus grandis]
Length = 94
Score = 77.0 bits (188), Expect = 6e-15
Identities = 39/56 (69%), Positives = 41/56 (73%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKNNSLHQHIKKD 443
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKNNS+HQH K D
Sbjct: 34 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKNNSVHQHFKAD 76
>ref|XP_010039336.1| PREDICTED: sm-like protein LSM36B isoform X1 [Eucalyptus grandis]
Length = 93
Score = 74.7 bits (182), Expect = 4e-14
Identities = 38/56 (67%), Positives = 41/56 (73%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKNNSLHQHIKKD 443
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKNNS+HQ+ K D
Sbjct: 33 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKNNSVHQYFKAD 75
>ref|XP_010066109.1| PREDICTED: sm-like protein LSM36B isoform X1 [Eucalyptus grandis]
Length = 94
Score = 74.7 bits (182), Expect = 4e-14
Identities = 38/56 (67%), Positives = 41/56 (73%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKNNSLHQHIKKD 443
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKNNS+HQ+ K D
Sbjct: 34 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKNNSVHQYFKAD 76
>gb|KCW63906.1| hypothetical protein EUGRSUZ_G01588 [Eucalyptus grandis]
Length = 94
Score = 74.7 bits (182), Expect = 4e-14
Identities = 38/56 (67%), Positives = 41/56 (73%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKNNSLHQHIKKD 443
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKNNS+HQ+ K D
Sbjct: 34 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKNNSVHQYFKAD 76
>gb|POF23328.1| u6 snrna-associated sm-like protein lsm6 [Quercus suber]
Length = 95
Score = 66.2 bits (160), Expect = 8e-11
Identities = 35/49 (71%), Positives = 36/49 (73%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKNNSL 464
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKNNSL
Sbjct: 59 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKNNSL 94
>gb|POF15953.1| sm-like protein lsm36b [Quercus suber]
Length = 70
Score = 63.5 bits (153), Expect = 4e-10
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = -2
Query: 559 HSGILACLDGYMNIAMEQTEEYVNGRLKNNSL 464
H ILACLDGYMNIAMEQTEEYVNG LKNNSL
Sbjct: 38 HQAILACLDGYMNIAMEQTEEYVNGHLKNNSL 69
>ref|XP_010051854.1| PREDICTED: sm-like protein LSM36B [Eucalyptus grandis]
ref|XP_010051855.1| PREDICTED: sm-like protein LSM36B [Eucalyptus grandis]
gb|KCW75680.1| hypothetical protein EUGRSUZ_D00038 [Eucalyptus grandis]
Length = 91
Score = 63.2 bits (152), Expect = 1e-09
Identities = 33/47 (70%), Positives = 34/47 (72%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKNN 470
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKNN
Sbjct: 33 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKNN 66
>gb|EOA24924.1| hypothetical protein CARUB_v10018215mg [Capsella rubella]
Length = 137
Score = 64.3 bits (155), Expect = 1e-09
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKN 473
SGVDYR T G+LACLDGYMNIAMEQTEEYVNG+LKN
Sbjct: 66 SGVDYRELLAKTTQVTSFEGVLACLDGYMNIAMEQTEEYVNGQLKN 111
>dbj|GAU40522.1| hypothetical protein TSUD_92940 [Trifolium subterraneum]
Length = 104
Score = 62.4 bits (150), Expect = 3e-09
Identities = 34/47 (72%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = -2
Query: 610 SGVDYRGCA-TC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKN 473
SGVDYR + T +S GILACLDGYMNIAMEQTEEYVNG+LKN
Sbjct: 32 SGVDYRVASDTSLVLSHIGVGILACLDGYMNIAMEQTEEYVNGQLKN 78
>ref|XP_002950049.1| hypothetical protein VOLCADRAFT_60073 [Volvox carteri f.
nagariensis]
gb|EFJ48717.1| hypothetical protein VOLCADRAFT_60073, partial [Volvox carteri f.
nagariensis]
Length = 73
Score = 60.8 bits (146), Expect = 5e-09
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKN 473
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKN
Sbjct: 21 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKN 53
>dbj|GAX82099.1| hypothetical protein CEUSTIGMA_g9527.t1 [Chlamydomonas eustigma]
Length = 78
Score = 60.8 bits (146), Expect = 6e-09
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKN 473
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKN
Sbjct: 34 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKN 66
>gb|OMO79213.1| hypothetical protein CCACVL1_13845 [Corchorus capsularis]
Length = 78
Score = 60.8 bits (146), Expect = 6e-09
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKN 473
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKN
Sbjct: 33 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKN 65
>dbj|GAU17248.1| hypothetical protein TSUD_109630 [Trifolium subterraneum]
Length = 80
Score = 60.8 bits (146), Expect = 6e-09
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKN 473
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKN
Sbjct: 32 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKN 64
>gb|KRH40502.1| hypothetical protein GLYMA_09G262700 [Glycine max]
Length = 80
Score = 60.8 bits (146), Expect = 6e-09
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKN 473
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKN
Sbjct: 33 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKN 65
>ref|XP_022942161.1| sm-like protein LSM36B isoform X2 [Cucurbita moschata]
Length = 82
Score = 60.8 bits (146), Expect = 6e-09
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKN 473
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKN
Sbjct: 33 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKN 65
>ref|XP_005851037.1| hypothetical protein CHLNCDRAFT_34269 [Chlorella variabilis]
gb|EFN58935.1| hypothetical protein CHLNCDRAFT_34269 [Chlorella variabilis]
Length = 85
Score = 60.8 bits (146), Expect = 7e-09
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKN 473
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKN
Sbjct: 32 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKN 64
>ref|XP_002502738.1| predicted protein [Micromonas commoda]
gb|ACO63996.1| predicted protein [Micromonas commoda]
Length = 86
Score = 60.8 bits (146), Expect = 7e-09
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKN 473
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKN
Sbjct: 33 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKN 65
>ref|XP_002980839.1| hypothetical protein SELMODRAFT_268399 [Selaginella moellendorffii]
ref|XP_002989366.1| hypothetical protein SELMODRAFT_235757 [Selaginella moellendorffii]
gb|EFJ09640.1| hypothetical protein SELMODRAFT_235757 [Selaginella moellendorffii]
gb|EFJ18024.1| hypothetical protein SELMODRAFT_268399 [Selaginella moellendorffii]
Length = 87
Score = 60.8 bits (146), Expect = 7e-09
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKN 473
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKN
Sbjct: 32 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKN 64
>ref|XP_019465277.1| PREDICTED: sm-like protein LSM6A [Lupinus angustifolius]
gb|OIW17652.1| hypothetical protein TanjilG_29002 [Lupinus angustifolius]
Length = 88
Score = 60.8 bits (146), Expect = 7e-09
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKN 473
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKN
Sbjct: 30 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKN 62
>ref|XP_018444714.1| PREDICTED: sm-like protein LSM36B [Raphanus sativus]
Length = 88
Score = 60.8 bits (146), Expect = 7e-09
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -2
Query: 610 SGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYVNGRLKN 473
SGVDYRG ILACLDGYMNIAMEQTEEYVNG+LKN
Sbjct: 30 SGVDYRG-------------ILACLDGYMNIAMEQTEEYVNGQLKN 62