BLASTX nr result

ID: Ophiopogon24_contig00017608 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00017608
         (353 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020246712.1| DNA-directed RNA polymerase III subunit RPC6...   170   5e-51
ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III s...   148   2e-42
ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III s...   148   3e-42
ref|XP_020691279.1| DNA-directed RNA polymerase III subunit RPC6...   140   2e-39
ref|XP_020574967.1| DNA-directed RNA polymerase III subunit RPC6...   141   3e-39
ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III s...   138   2e-38
ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III s...   135   2e-37
ref|XP_019705973.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   133   1e-36
gb|PKA46474.1| hypothetical protein AXF42_Ash012607 [Apostasia s...   130   1e-35
ref|XP_021609496.1| DNA-directed RNA polymerase III subunit RPC6...   130   3e-35
ref|XP_021672680.1| DNA-directed RNA polymerase III subunit RPC6...   127   3e-34
ref|XP_021681807.1| DNA-directed RNA polymerase III subunit RPC6...   126   7e-34
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s...   124   4e-33
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s...   124   5e-33
ref|XP_006427248.1| DNA-directed RNA polymerase III subunit RPC6...   124   5e-33
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s...   124   6e-33
gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [...   123   1e-32
ref|XP_002509507.1| PREDICTED: DNA-directed RNA polymerase III s...   123   2e-32
ref|XP_018829908.1| PREDICTED: DNA-directed RNA polymerase III s...   122   3e-32
ref|XP_012073203.1| DNA-directed RNA polymerase III subunit RPC6...   120   1e-31

>ref|XP_020246712.1| DNA-directed RNA polymerase III subunit RPC6 [Asparagus
           officinalis]
 ref|XP_020246713.1| DNA-directed RNA polymerase III subunit RPC6 [Asparagus
           officinalis]
 gb|ONK58492.1| uncharacterized protein A4U43_C09F13600 [Asparagus officinalis]
          Length = 231

 Score =  170 bits (430), Expect = 5e-51
 Identities = 85/122 (69%), Positives = 105/122 (86%), Gaps = 5/122 (4%)
 Frame = +1

Query: 1   AINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILR 180
           A+ KALKSL TKNLIKEV S+K+K+RK+VM VEFEPS ++SGG WYQ G+LDVAFIKILR
Sbjct: 45  AVAKALKSLLTKNLIKEVISIKNKSRKMVMAVEFEPSADVSGGAWYQSGSLDVAFIKILR 104

Query: 181 QQCRRLMEDLKVATCEMIRKSIKDSR-----VFNMDITLQQIYEIVELMVLDKEVDKLKS 345
           QQCRR +E+ KVATCEM+RK+IK+ +     VF  +ITLQQ+YEI+ELMVLDKEV+K++S
Sbjct: 105 QQCRRHVEEHKVATCEMVRKAIKEPKRGRPPVFTTEITLQQVYEILELMVLDKEVEKVRS 164

Query: 346 SG 351
           SG
Sbjct: 165 SG 166


>ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
           dactylifera]
 ref|XP_008813400.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
           dactylifera]
          Length = 232

 Score =  148 bits (374), Expect = 2e-42
 Identities = 73/116 (62%), Positives = 94/116 (81%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           + K LKSLQ KNLIK+V ++ +K RKI M VEFEPS+EISGG+WY DG+LD  FI+ILR+
Sbjct: 53  VTKTLKSLQNKNLIKDVVNIHNKARKIYMAVEFEPSKEISGGSWYSDGSLDTDFIRILRE 112

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           QC + +E L+VAT E I KSI++SRVF ++ T+QQI EIV  MVLDKEV++LKS+G
Sbjct: 113 QCLKHIERLQVATMEAIYKSIQESRVFKVECTMQQIVEIVNAMVLDKEVEELKSTG 168


>ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
           guineensis]
 ref|XP_010927733.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
           guineensis]
 ref|XP_010927734.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
           guineensis]
 ref|XP_010927735.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
           guineensis]
          Length = 237

 Score =  148 bits (373), Expect = 3e-42
 Identities = 70/116 (60%), Positives = 95/116 (81%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           + K LKSLQ KNLIK+V ++ +K RKI M +EFEPS+EISGG+WY DG+LD+ FI+ILR+
Sbjct: 58  VTKTLKSLQNKNLIKDVVNIHNKARKIYMAMEFEPSKEISGGSWYSDGSLDIEFIRILRE 117

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           QC + +E L++AT E I KSI++SRVF ++ T+QQI EIV  MVLDKE+++LKS+G
Sbjct: 118 QCLKHIERLQIATMEAIYKSIQESRVFKVECTMQQIVEIVNAMVLDKEIEELKSTG 173


>ref|XP_020691279.1| DNA-directed RNA polymerase III subunit RPC6 [Dendrobium catenatum]
 ref|XP_020691280.1| DNA-directed RNA polymerase III subunit RPC6 [Dendrobium catenatum]
 gb|PKU75411.1| hypothetical protein MA16_Dca020480 [Dendrobium catenatum]
          Length = 231

 Score =  140 bits (353), Expect = 2e-39
 Identities = 70/117 (59%), Positives = 93/117 (79%)
 Frame = +1

Query: 1   AINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILR 180
           A+ KALKSLQ+K  IK+V ++ +K +KI M VEFEPS+EISGGTWY +G+LD+ FI ILR
Sbjct: 51  AVTKALKSLQSKGFIKDVVNIHNKAKKIYMAVEFEPSKEISGGTWYSEGSLDLEFITILR 110

Query: 181 QQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           +QCR  +E LKVAT E + + I+DS+VF +D +LQQI EI+  MVLDKE+++L SSG
Sbjct: 111 KQCRLHVERLKVATLENVWQFIRDSKVFYIDFSLQQIKEIMSAMVLDKELEELISSG 167


>ref|XP_020574967.1| DNA-directed RNA polymerase III subunit RPC6 [Phalaenopsis
           equestris]
          Length = 282

 Score =  141 bits (356), Expect = 3e-39
 Identities = 69/117 (58%), Positives = 91/117 (77%)
 Frame = +1

Query: 1   AINKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILR 180
           A+ KALKSLQ+KNLIK+V +V +K RK  M VEFEPS+EISGGTWY DG LD+ FI+ILR
Sbjct: 102 AVTKALKSLQSKNLIKDVVNVHNKARKFFMAVEFEPSKEISGGTWYSDGTLDLEFIRILR 161

Query: 181 QQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           +QCR  +E LK+A+ E + K ++DS +F  + +LQQI EI+  M LDKE+++L SSG
Sbjct: 162 EQCRMHVERLKIASVENVWKCVRDSGIFKTECSLQQIQEILVAMYLDKEIEELISSG 218


>ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
           acuminata subsp. malaccensis]
 ref|XP_018684305.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
           acuminata subsp. malaccensis]
          Length = 237

 Score =  138 bits (348), Expect = 2e-38
 Identities = 65/116 (56%), Positives = 89/116 (76%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           + KALKSLQ+KNLIK+V +V +K+RK  M VEFEPS+E+SGG+WY DG+LD  FI ILR 
Sbjct: 58  VTKALKSLQSKNLIKDVVNVHNKSRKTFMAVEFEPSKEVSGGSWYSDGSLDTEFINILRM 117

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
            C + +EDL++AT E I K I  SR+  ++ T+QQ+ EIV  + LDKE+++LKS+G
Sbjct: 118 MCLKHIEDLRIATIEDIHKCIAASRIMKVECTMQQVLEIVRALALDKEIEELKSTG 173


>ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
           acuminata subsp. malaccensis]
 ref|XP_009386160.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
           acuminata subsp. malaccensis]
          Length = 237

 Score =  135 bits (341), Expect = 2e-37
 Identities = 67/116 (57%), Positives = 88/116 (75%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           + KALKSLQ KNLIK+V +V +K RKI M VEFEPS+E+SGG+WY +G+LD  FI ILR+
Sbjct: 58  VTKALKSLQNKNLIKDVVNVHNKARKIFMAVEFEPSKEVSGGSWYSEGSLDTEFINILRK 117

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
            C + +E+LKVAT E I KSI  S V  +  T+QQ+ EIV  + LDKE+++LKS+G
Sbjct: 118 MCLKHIEELKVATIEDIWKSISASGVLKVACTMQQVLEIVRALALDKEIEELKSTG 173


>ref|XP_019705973.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
           subunit rpc6-like [Elaeis guineensis]
          Length = 240

 Score =  133 bits (335), Expect = 1e-36
 Identities = 68/119 (57%), Positives = 89/119 (74%), Gaps = 3/119 (2%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKH---KTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKI 174
           + K LKSLQ KNLIK+V ++ +   K RKI + VEFEP +EISGG+WY DG+LD  FI+I
Sbjct: 58  VTKTLKSLQNKNLIKDVVNIHNIHNKARKIYVAVEFEPXKEISGGSWYSDGSLDTDFIRI 117

Query: 175 LRQQCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           LR+QC   +E  +VAT E I KSI++SRVF ++ T+  I EIV  MVLDKEV++LKS+G
Sbjct: 118 LREQCLNHIERFQVATMEAIYKSIQESRVFKVECTMHHIVEIVNAMVLDKEVEELKSTG 176


>gb|PKA46474.1| hypothetical protein AXF42_Ash012607 [Apostasia shenzhenica]
          Length = 230

 Score =  130 bits (328), Expect = 1e-35
 Identities = 65/114 (57%), Positives = 86/114 (75%)
 Frame = +1

Query: 10  KALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQC 189
           K LKSLQTK+LIK V ++ +K +K  M VEFEPS+EI+GGTWY +G+LD  FI +LR QC
Sbjct: 53  KTLKSLQTKDLIKAVANINNKGKKFFMAVEFEPSKEITGGTWYSEGSLDFEFINVLRGQC 112

Query: 190 RRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
            R +E  KVAT E++ + I+DS VF  + T+QQI EI+  MVLDKE+++L SSG
Sbjct: 113 LRHIERHKVATVEIVWQCIRDSGVFTTECTMQQIKEIMGAMVLDKEIEELNSSG 166


>ref|XP_021609496.1| DNA-directed RNA polymerase III subunit RPC6 [Manihot esculenta]
 gb|OAY52825.1| hypothetical protein MANES_04G114300 [Manihot esculenta]
 gb|OAY52826.1| hypothetical protein MANES_04G114300 [Manihot esculenta]
          Length = 236

 Score =  130 bits (326), Expect = 3e-35
 Identities = 66/116 (56%), Positives = 88/116 (75%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           +NK+LK LQ KNLIKEV ++++K RK  M  EFEPS+EI+GGTWY +G LD  FI+IL++
Sbjct: 56  VNKSLKVLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGTWYVEGNLDTEFIQILKE 115

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           QC + +  LKVAT E I  SIK S V N+++T QQI EIV+ +VLD E+ +LKS+G
Sbjct: 116 QCTKQIYKLKVATLEGITDSIKRSGVLNVELTKQQIDEIVKALVLDNEIIELKSNG 171


>ref|XP_021672680.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
           brasiliensis]
 ref|XP_021672688.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
           brasiliensis]
          Length = 236

 Score =  127 bits (319), Expect = 3e-34
 Identities = 63/116 (54%), Positives = 88/116 (75%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           +NK+LK LQ KNLIKEV ++++K RK  M +EFEPS+EI+GG WY DG LD  FI+IL++
Sbjct: 56  VNKSLKVLQAKNLIKEVVNIQNKGRKHYMAMEFEPSKEITGGAWYVDGNLDTEFIQILKE 115

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           QC + +  LKVAT E +  SI+ S V N+++T QQI EIV+ +VLD E+ ++KS+G
Sbjct: 116 QCTKQIYKLKVATLEGVTDSIRRSGVLNVELTKQQIEEIVKALVLDDEIIEVKSNG 171


>ref|XP_021681807.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
           brasiliensis]
          Length = 236

 Score =  126 bits (317), Expect = 7e-34
 Identities = 63/116 (54%), Positives = 87/116 (75%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           +NK+LK LQ KNLIKEV ++++K RK  M  EFEPS+EI+GG WY +G LD  FI+IL++
Sbjct: 56  VNKSLKVLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIQILKE 115

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           QC + +  LKVAT E +  SIK S V N+++T QQI EI++ +VLD E+ +LKS+G
Sbjct: 116 QCTKQIYKLKVATLEGVTDSIKRSGVLNVELTKQQIDEILKALVLDNEIIELKSNG 171


>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X2 [Citrus sinensis]
          Length = 234

 Score =  124 bits (312), Expect = 4e-33
 Identities = 61/116 (52%), Positives = 86/116 (74%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           + K++KSLQ K+LIKEV ++ +K +K +M VEFEPS+EISGG WY +G+LD  FIK+++ 
Sbjct: 54  VTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKS 113

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           QC + +  LKVAT E I  SIK S  F +D+T QQI EIV  +VLD ++ ++KS+G
Sbjct: 114 QCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNG 169


>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Citrus sinensis]
          Length = 233

 Score =  124 bits (311), Expect = 5e-33
 Identities = 61/116 (52%), Positives = 85/116 (73%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           + K++KSLQ K+LIKEV ++  K +K +M VEFEPS+EISGG WY +G+LD  FIK+++ 
Sbjct: 53  VTKSIKSLQNKSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKS 112

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           QC + +  LKVAT E I  SIK S  F +D+T QQI EIV  +VLD ++ ++KS+G
Sbjct: 113 QCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNG 168


>ref|XP_006427248.1| DNA-directed RNA polymerase III subunit RPC6 [Citrus clementina]
 ref|XP_024036378.1| DNA-directed RNA polymerase III subunit RPC6 [Citrus clementina]
 gb|ESR40488.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
 gb|KDO45213.1| hypothetical protein CISIN_1g026766mg [Citrus sinensis]
 gb|KDO45214.1| hypothetical protein CISIN_1g026766mg [Citrus sinensis]
 dbj|GAY63105.1| hypothetical protein CUMW_222970 [Citrus unshiu]
          Length = 233

 Score =  124 bits (311), Expect = 5e-33
 Identities = 61/116 (52%), Positives = 85/116 (73%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           + K++KSLQ K+LIKEV ++  K +K +M VEFEPS+EISGG WY +G+LD  FIK+++ 
Sbjct: 53  VTKSIKSLQNKSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKS 112

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           QC + +  LKVAT E I  SIK S  F +D+T QQI EIV  +VLD ++ ++KS+G
Sbjct: 113 QCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNG 168


>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X1 [Citrus sinensis]
          Length = 252

 Score =  124 bits (312), Expect = 6e-33
 Identities = 61/116 (52%), Positives = 86/116 (74%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           + K++KSLQ K+LIKEV ++ +K +K +M VEFEPS+EISGG WY +G+LD  FIK+++ 
Sbjct: 72  VTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKS 131

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           QC + +  LKVAT E I  SIK S  F +D+T QQI EIV  +VLD ++ ++KS+G
Sbjct: 132 QCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNG 187


>gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [Citrus sinensis]
          Length = 234

 Score =  123 bits (309), Expect = 1e-32
 Identities = 60/116 (51%), Positives = 86/116 (74%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           + K++KSLQ K+LIKEV ++ +K +K +M VEFEPS++ISGG WY +G+LD  FIK+++ 
Sbjct: 54  VTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKDISGGAWYSEGSLDTEFIKVVKS 113

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           QC + +  LKVAT E I  SIK S  F +D+T QQI EIV  +VLD ++ ++KS+G
Sbjct: 114 QCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNG 169


>ref|XP_002509507.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ricinus
           communis]
 ref|XP_015570361.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ricinus
           communis]
 ref|XP_015570404.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ricinus
           communis]
 gb|EEF50894.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
           communis]
          Length = 236

 Score =  123 bits (308), Expect = 2e-32
 Identities = 62/116 (53%), Positives = 85/116 (73%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           +NK+LK LQ KNLIKEV ++++K RK  M  EFEPS+EI+GG WY +G LD  FIK+L++
Sbjct: 56  VNKSLKVLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKE 115

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
            C + +  LKVAT E I  SIK S +FN ++T QQI EIV+ +VLD  + ++KS+G
Sbjct: 116 VCTKQVLKLKVATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNG 171


>ref|XP_018829908.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           [Juglans regia]
 ref|XP_018829909.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           [Juglans regia]
 ref|XP_018829910.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           [Juglans regia]
          Length = 239

 Score =  122 bits (306), Expect = 3e-32
 Identities = 58/116 (50%), Positives = 85/116 (73%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           + K+LKSLQTK LIKEV ++++K RK  +  EFEPS EI+GGTWY +G LD  FI  L++
Sbjct: 59  VTKSLKSLQTKKLIKEVVNIQNKGRKHYIATEFEPSTEITGGTWYAEGNLDTEFINFLKK 118

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
            C +++ + KVAT E +  +I+ SR FN++ T QQ+ EIV ++VLD E+ ++KS+G
Sbjct: 119 HCVKIIYEQKVATLEGVLDTIRRSRAFNIEFTTQQVEEIVNVLVLDNEIMEVKSNG 174


>ref|XP_012073203.1| DNA-directed RNA polymerase III subunit RPC6 [Jatropha curcas]
 ref|XP_020535305.1| DNA-directed RNA polymerase III subunit RPC6 [Jatropha curcas]
 ref|XP_020535306.1| DNA-directed RNA polymerase III subunit RPC6 [Jatropha curcas]
 dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
 gb|KDP37096.1| hypothetical protein JCGZ_06152 [Jatropha curcas]
          Length = 235

 Score =  120 bits (302), Expect = 1e-31
 Identities = 59/116 (50%), Positives = 84/116 (72%)
 Frame = +1

Query: 4   INKALKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQ 183
           +NK+LK LQ KNLIKEV ++++K RK  M  EFEPS+EI+GGTWY +G LD  FI +L+ 
Sbjct: 56  VNKSLKVLQAKNLIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKD 115

Query: 184 QCRRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 351
           QC++ +E LKVAT E +   I  + V  + +T QQI EI++ +VLD +V ++KS+G
Sbjct: 116 QCKKQIEKLKVATVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNG 171


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