BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00017336
         (389 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]   132   4e-33
gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo...   125   3e-32
gb|PNX56512.1| hypothetical protein L195_g058242, partial [Trifo...   116   8e-31
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]   122   8e-30
gb|PON54809.1| LOW QUALITY PROTEIN: Gag-Pol-related retrotranspo...   116   1e-28
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   119   2e-28
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]   115   2e-28
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   118   3e-28
gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo...   116   3e-28
gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium bar...   117   4e-28
ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766...   111   5e-28
emb|CAN79451.1| hypothetical protein VITISV_001677 [Vitis vinifera]   116   1e-27
gb|KYP47563.1| Retrovirus-related Pol polyprotein from transposo...   111   2e-27
gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposo...   115   2e-27
gb|AFB73912.1| polyprotein [Citrus sinensis]                          115   3e-27
gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposo...   112   3e-27
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo...   115   3e-27
emb|CBG76256.1| OO_Ba0005L10-OO_Ba0081K17.7 [Oryza officinalis]       114   4e-27
emb|CAJ86192.1| H0306F03.15 [Oryza sativa]                            115   4e-27
emb|CAJ86151.1| H0413E07.4 [Oryza sativa]                             115   4e-27

>gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]
          Length = 707

 Score =  132 bits (331), Expect = 4e-33
 Identities = 59/104 (56%), Positives = 79/104 (75%)
 Frame = +2

Query: 77  DTEAEEACDVLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVC 256
           +TE++  C + +      K  + W+LDSGCT+HMSP RDWF+TY   +GG VLMGN++ C
Sbjct: 264 ETESDGECFIASGTEQRSK--NEWVLDSGCTFHMSPNRDWFTTYESFNGGLVLMGNDAQC 321

Query: 257 RIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGC 388
           ++VG G+I I++HDG  RTLT VRHVPDLK+NL+SLG LE+QGC
Sbjct: 322 KVVGKGTIKIKTHDGVVRTLTSVRHVPDLKRNLISLGTLESQGC 365


>gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 365

 Score =  125 bits (315), Expect = 3e-32
 Identities = 59/104 (56%), Positives = 75/104 (72%)
 Frame = +2

Query: 77  DTEAEEACDVLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVC 256
           + ++E  C    ++S     SD+WILDS C++HM P RDWFSTY + DGG V+MGNNS C
Sbjct: 151 EKDSETLCTFSCMDS-----SDSWILDSDCSYHMCPFRDWFSTYSIHDGGRVIMGNNSEC 205

Query: 257 RIVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGC 388
           + VGIG+I I+  DG  RTLT VRHVPDL+K L+SLG L+A GC
Sbjct: 206 KSVGIGTIKIKMFDGVIRTLTEVRHVPDLRKGLISLGTLDASGC 249


>gb|PNX56512.1| hypothetical protein L195_g058242, partial [Trifolium pratense]
          Length = 145

 Score =  116 bits (291), Expect = 8e-31
 Identities = 52/96 (54%), Positives = 66/96 (68%)
 Frame = +2

Query: 101 DVLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGIGSI 280
           D  ++      +S  W+LDSG + HM P R WF+TY  +DGG VLMGNN  C+I+G G+I
Sbjct: 37  DCFSISEQDHDISGRWMLDSGASHHMCPNRKWFTTYESIDGGIVLMGNNHACKIMGYGTI 96

Query: 281 LIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGC 388
            I+ HDG  RTL  VRHVP+L+KNL+SLG LE  GC
Sbjct: 97  RIKMHDGAVRTLMNVRHVPNLRKNLISLGVLEENGC 132


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score =  122 bits (307), Expect = 8e-30
 Identities = 54/98 (55%), Positives = 74/98 (75%)
 Frame = +2

Query: 92  EACDVLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGI 271
           ++ +VLT+   +    + W+LDSGCT+HM PRRDWFS+Y+ ++GG +L+GNN  C +VGI
Sbjct: 162 DSTEVLTIR--LNPNHEEWVLDSGCTYHMCPRRDWFSSYQEVNGGKLLLGNNMSCNVVGI 219

Query: 272 GSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQG 385
           G++ I  HDG TRTL  VRHVPDLK+NL+SLG L+  G
Sbjct: 220 GTMAINMHDGKTRTLKEVRHVPDLKRNLISLGTLDKSG 257


>gb|PON54809.1| LOW QUALITY PROTEIN: Gag-Pol-related retrotransposon family protein
           [Trema orientalis]
          Length = 380

 Score =  116 bits (291), Expect = 1e-28
 Identities = 52/98 (53%), Positives = 70/98 (71%)
 Frame = +2

Query: 92  EACDVLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGI 271
           E+ +VL++       S  W++DSGC++HM PR DWF  Y+ +DGG VLMGNN  C+++GI
Sbjct: 275 ESSEVLSISESEN--SKEWVMDSGCSYHMCPREDWFMDYQEVDGGKVLMGNNMACKVMGI 332

Query: 272 GSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQG 385
           GSI IR  DG TR L  VRHVP+LK++L+SLG L+  G
Sbjct: 333 GSISIRMFDGVTRILKNVRHVPELKRSLISLGTLDKSG 370


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  119 bits (297), Expect = 2e-28
 Identities = 55/93 (59%), Positives = 69/93 (74%)
 Frame = +2

Query: 107 LTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGIGSILI 286
           L V        D WILDSGCT+HM P RDWF  ++ +DGG V MGN++ C+ VGIGSI +
Sbjct: 211 LIVSLSASSYPDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKL 270

Query: 287 RSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQG 385
           R+HDG+TR L  VR+VP LKKNL+SLGALE++G
Sbjct: 271 RNHDGSTRILRDVRYVPKLKKNLISLGALESKG 303


>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score =  115 bits (288), Expect = 2e-28
 Identities = 56/102 (54%), Positives = 67/102 (65%)
 Frame = +2

Query: 83  EAEEACDVLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRI 262
           E     DVL V   +    D WILDSGC++HMSP  DWFSTY+ +DGG VLMGN   C++
Sbjct: 216 ENSNTTDVLLVX--VTNSDDEWILDSGCSYHMSPNGDWFSTYQPIDGGKVLMGNKVACKV 273

Query: 263 VGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGC 388
           VGI  I I+ H G  RTLT VRHVP L KNL+ L  L++ GC
Sbjct: 274 VGIHXIQIKMHGGIIRTLTNVRHVPKLNKNLIFLRTLDSNGC 315


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  118 bits (295), Expect = 3e-28
 Identities = 53/82 (64%), Positives = 67/82 (81%)
 Frame = +2

Query: 140 DTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGIGSILIRSHDGTTRTLT 319
           D WILDSGCT+HM P RDWF  ++ +DGG V MGN++ C+ VGIGSI +R+HDG+TR L 
Sbjct: 223 DEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILR 282

Query: 320 GVRHVPDLKKNLLSLGALEAQG 385
            VR+VP LKKNL+SLGALE++G
Sbjct: 283 DVRYVPKLKKNLISLGALESKG 304


>gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 448

 Score =  116 bits (291), Expect = 3e-28
 Identities = 52/94 (55%), Positives = 68/94 (72%)
 Frame = +2

Query: 104 VLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGIGSIL 283
           VL++     + +D W+LDSGC++HM P R WF TY    GG V MGN+  C+ VGIG+I 
Sbjct: 39  VLSIVDNHQQSADQWVLDSGCSYHMCPNRSWFLTYEERLGGRVFMGNDMPCKTVGIGTIQ 98

Query: 284 IRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQG 385
           +R HDG  RTLT VRHVPDLKKNL+S+G L+++G
Sbjct: 99  LRMHDGVIRTLTEVRHVPDLKKNLISVGVLDSKG 132


>gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium barbadense]
          Length = 718

 Score =  117 bits (294), Expect = 4e-28
 Identities = 53/95 (55%), Positives = 72/95 (75%)
 Frame = +2

Query: 104 VLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGIGSIL 283
           +L   S   KL+  WILDSGC++HM P R+WFSTY  ++GG V MGN+S  +I+GIG++ 
Sbjct: 522 LLVSTSDNSKLTSEWILDSGCSFHMYPNREWFSTYSSVEGGVVHMGNDSSSKIIGIGTVK 581

Query: 284 IRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQGC 388
           IR HDGT +TL+ VR+VPDL+KNL+SL  L+ +GC
Sbjct: 582 IRIHDGTIKTLSDVRYVPDLRKNLISLSILDLKGC 616


>ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766925 [Gossypium
           raimondii]
          Length = 217

 Score =  111 bits (278), Expect = 5e-28
 Identities = 45/83 (54%), Positives = 66/83 (79%)
 Frame = +2

Query: 137 SDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGIGSILIRSHDGTTRTL 316
           +D WILD GCT+HM P +DWFS+ + ++GG V MGN+S C+ +G+G+I +++HDG  + L
Sbjct: 5   TDEWILDLGCTYHMCPNKDWFSSLKELEGGIVFMGNDSACKTMGVGTIQLKNHDGLIQVL 64

Query: 317 TGVRHVPDLKKNLLSLGALEAQG 385
           T VR++P LKKNL+SLG LE++G
Sbjct: 65  TDVRYIPSLKKNLISLGVLESKG 87


>emb|CAN79451.1| hypothetical protein VITISV_001677 [Vitis vinifera]
          Length = 805

 Score =  116 bits (291), Expect = 1e-27
 Identities = 51/95 (53%), Positives = 70/95 (73%)
 Frame = +2

Query: 101 DVLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGIGSI 280
           + L +E     L+D WILDS C++HM+P +DWF+TYR ++ GSVLMGN++ C++ GIG+I
Sbjct: 130 ETLDLEEITNHLTDYWILDSACSYHMTPNKDWFNTYRSVNSGSVLMGNDASCKVAGIGNI 189

Query: 281 LIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQG 385
           +I+  DG  RTL  VRHV DL KNL+SLG L+  G
Sbjct: 190 IIKMFDGVVRTLCDVRHVSDLXKNLISLGTLDCNG 224


>gb|KYP47563.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 269

 Score =  111 bits (278), Expect = 2e-27
 Identities = 49/94 (52%), Positives = 64/94 (68%)
 Frame = +2

Query: 104 VLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGIGSIL 283
           VL++       ++ W+LDSGC++HM P R WF TY     G V MGN+  C+I+GI +I 
Sbjct: 171 VLSIVDNHQHSAEQWVLDSGCSYHMCPNRSWFLTYEKKSSGDVFMGNDMACKIIGIETIQ 230

Query: 284 IRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQG 385
           I  HDG  RTLT VRHVPDLKKNL+S+G L+ +G
Sbjct: 231 IEMHDGVIRTLTEVRHVPDLKKNLISVGVLDTKG 264


>gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 507

 Score =  115 bits (287), Expect = 2e-27
 Identities = 50/94 (53%), Positives = 65/94 (69%)
 Frame = +2

Query: 104 VLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGIGSIL 283
           VL++       ++ W+LDSGC++HM P R WF TY    GG V MGN+  C+ +GIG+I 
Sbjct: 173 VLSIVDNHQHSAEQWVLDSGCSYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQ 232

Query: 284 IRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQG 385
           I+ HDG  RTLT VRHVPDLKKNL+S+G L  +G
Sbjct: 233 IKMHDGVIRTLTEVRHVPDLKKNLISVGVLHTKG 266


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  115 bits (288), Expect = 3e-27
 Identities = 52/92 (56%), Positives = 65/92 (70%)
 Frame = +2

Query: 113 VESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGIGSILIRS 292
           V  G  +LSD W++DSG TWHM+ RR+WF TY  + GGSV MGN+    I GIG+I I+ 
Sbjct: 281 VSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKM 340

Query: 293 HDGTTRTLTGVRHVPDLKKNLLSLGALEAQGC 388
            DGT RT+  VRHV  LKKNLLSLG +++ GC
Sbjct: 341 FDGTIRTIEEVRHVNGLKKNLLSLGQMDSHGC 372


>gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 364

 Score =  112 bits (281), Expect = 3e-27
 Identities = 50/88 (56%), Positives = 64/88 (72%)
 Frame = +2

Query: 104 VLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGIGSIL 283
           VL++        D WILDSGC++HM P R WF TY    GG+V MGN++ C+ +GIG+I 
Sbjct: 275 VLSIADQPQHSEDQWILDSGCSFHMCPNRTWFDTYEKKSGGNVFMGNDAPCKTIGIGTIK 334

Query: 284 IRSHDGTTRTLTGVRHVPDLKKNLLSLG 367
           I+ HDG TRTLT VRHVP+LKKNL+S+G
Sbjct: 335 IKMHDGITRTLTEVRHVPELKKNLISVG 362


>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 609

 Score =  115 bits (287), Expect = 3e-27
 Identities = 50/94 (53%), Positives = 65/94 (69%)
 Frame = +2

Query: 104 VLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCRIVGIGSIL 283
           VL++       ++ W+LDSGC++HM P R WF TY    GG V MGN+  C+ +GIG+I 
Sbjct: 200 VLSIVDNHQHSAEQWVLDSGCSYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQ 259

Query: 284 IRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQG 385
           I+ HDG  RTLT VRHVPDLKKNL+S+G L  +G
Sbjct: 260 IKMHDGVIRTLTEVRHVPDLKKNLISVGVLHTKG 293


>emb|CBG76256.1| OO_Ba0005L10-OO_Ba0081K17.7 [Oryza officinalis]
          Length = 565

 Score =  114 bits (286), Expect = 4e-27
 Identities = 49/102 (48%), Positives = 73/102 (71%)
 Frame = +2

Query: 80  TEAEEACDVLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCR 259
           T+ +   ++L    G  + SD WILD+ CT+HM P RDWF TY  + GG+VLMG+N++C+
Sbjct: 203 TDDKSGAELLVAYVGCAQTSDQWILDTACTYHMCPNRDWFVTYEFVQGGTVLMGDNTLCK 262

Query: 260 IVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQG 385
           +VGIG+I I+  DG  RTL+ V+H+P+LK+N++SL  L  +G
Sbjct: 263 VVGIGTIQIKMFDGCIRTLSDVQHIPNLKRNVISLYTLNHKG 304


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa]
          Length = 1037

 Score =  115 bits (287), Expect = 4e-27
 Identities = 48/102 (47%), Positives = 74/102 (72%)
 Frame = +2

Query: 80  TEAEEACDVLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCR 259
           T+ +   ++L   +G  + SD WILD+ CT+HM P RDWF+TY V+ GG+VLMG+++ C 
Sbjct: 95  TDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCE 154

Query: 260 IVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQG 385
           + GIG++ I+  DG  RTL+ VRH+P+LK++L+SL  L+ +G
Sbjct: 155 VAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKG 196


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa]
          Length = 1205

 Score =  115 bits (287), Expect = 4e-27
 Identities = 48/102 (47%), Positives = 74/102 (72%)
 Frame = +2

Query: 80  TEAEEACDVLTVESGMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGGSVLMGNNSVCR 259
           T+ +   ++L   +G  + SD WILD+ CT+HM P RDWF+TY V+ GG+VLMG+++ C 
Sbjct: 263 TDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCE 322

Query: 260 IVGIGSILIRSHDGTTRTLTGVRHVPDLKKNLLSLGALEAQG 385
           + GIG++ I+  DG  RTL+ VRH+P+LK++L+SL  L+ +G
Sbjct: 323 VAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKG 364