BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00017176
         (576 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020271598.1| DNA topoisomerase 1 beta-like [Asparagus off...    97   9e-20
gb|ONK70111.1| uncharacterized protein A4U43_C05F30370 [Asparagu...    91   7e-18
ref|XP_020265341.1| DNA topoisomerase 1 beta-like [Asparagus off...    91   7e-18
ref|XP_020110487.1| DNA topoisomerase 1 alpha-like isoform X2 [A...    66   4e-09
ref|XP_020110486.1| DNA topoisomerase 1 alpha-like isoform X1 [A...    66   4e-09

>ref|XP_020271598.1| DNA topoisomerase 1 beta-like [Asparagus officinalis]
 ref|XP_020271602.1| DNA topoisomerase 1 beta-like [Asparagus officinalis]
          Length = 936

 Score = 96.7 bits (239), Expect = 9e-20
 Identities = 69/152 (45%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
 Frame = -3

Query: 448 MAVQTGCTTPVFYXXXXXXD--GPAIFRRSGTAXXXXXXXXXXXXXXXXKHEETRGRHIP 275
           MAV  G   PVF+      D  GPAIF+R+ T                 KHEETR R + 
Sbjct: 1   MAVD-GRPKPVFHDNGEDDDDDGPAIFKRTNTTSKQSHLNSALKKSLSQKHEETRERPVS 59

Query: 274 NQNARNG--ESSSSQTAKATSNVKLSTEKPGVVSSNSRASAPNQLNHSSKNGLSNSSAKN 101
           + N RNG  ESSSSQ  K  SN KLS+ K   V+SNS AS+  Q NHSSKNGL + S K 
Sbjct: 60  SHNVRNGNGESSSSQKNKVISNAKLSSAKSSAVTSNSGASSLRQPNHSSKNGLPSVSVKT 119

Query: 100 LHDNXXXXXXXXXXXXXXXKPLNSRFNSASAA 5
            H N               KPL+SRFNSAS A
Sbjct: 120 SHTNNSCDKVENSDDSDDGKPLSSRFNSASVA 151


>gb|ONK70111.1| uncharacterized protein A4U43_C05F30370 [Asparagus officinalis]
          Length = 926

 Score = 91.3 bits (225), Expect = 7e-18
 Identities = 66/151 (43%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
 Frame = -3

Query: 448 MAVQTGCTTPVFYXXXXXXD---GPAIFRRSGTAXXXXXXXXXXXXXXXXKHEETRGRHI 278
           MAV  G   PVF+      D    P +FRR+  A                K EETRGR I
Sbjct: 1   MAVD-GHVKPVFHDNSDVIDDDDAPVVFRRTSAASKKNQLNSASKKPSSQKPEETRGRPI 59

Query: 277 PNQNARNGESSSSQTAKATSNVKLSTEKPGVVSSNSRASAPNQLNHSSKNGLSNSSAKNL 98
            +Q+A NGESSS    K TS   +STEK G V SN  AS P+Q NHSS+N  S+S AK+L
Sbjct: 60  ESQSACNGESSSLHKNKVTSTANVSTEKSGAVCSNFGASVPSQSNHSSRNRSSSSGAKSL 119

Query: 97  HDNXXXXXXXXXXXXXXXKPLNSRFNSASAA 5
           H N               KPL+SRFN+AS A
Sbjct: 120 HTN-TCDEVEDSDDSDDDKPLSSRFNTASVA 149


>ref|XP_020265341.1| DNA topoisomerase 1 beta-like [Asparagus officinalis]
 ref|XP_020265342.1| DNA topoisomerase 1 beta-like [Asparagus officinalis]
          Length = 950

 Score = 91.3 bits (225), Expect = 7e-18
 Identities = 66/151 (43%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
 Frame = -3

Query: 448 MAVQTGCTTPVFYXXXXXXD---GPAIFRRSGTAXXXXXXXXXXXXXXXXKHEETRGRHI 278
           MAV  G   PVF+      D    P +FRR+  A                K EETRGR I
Sbjct: 1   MAVD-GHVKPVFHDNSDVIDDDDAPVVFRRTSAASKKNQLNSASKKPSSQKPEETRGRPI 59

Query: 277 PNQNARNGESSSSQTAKATSNVKLSTEKPGVVSSNSRASAPNQLNHSSKNGLSNSSAKNL 98
            +Q+A NGESSS    K TS   +STEK G V SN  AS P+Q NHSS+N  S+S AK+L
Sbjct: 60  ESQSACNGESSSLHKNKVTSTANVSTEKSGAVCSNFGASVPSQSNHSSRNRSSSSGAKSL 119

Query: 97  HDNXXXXXXXXXXXXXXXKPLNSRFNSASAA 5
           H N               KPL+SRFN+AS A
Sbjct: 120 HTN-TCDEVEDSDDSDDDKPLSSRFNTASVA 149


>ref|XP_020110487.1| DNA topoisomerase 1 alpha-like isoform X2 [Ananas comosus]
          Length = 765

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 52/148 (35%), Positives = 69/148 (46%)
 Frame = -3

Query: 448 MAVQTGCTTPVFYXXXXXXDGPAIFRRSGTAXXXXXXXXXXXXXXXXKHEETRGRHIPNQ 269
           MAV  GC +PV Y      DGPAIF+R  ++                 +  + GR   N+
Sbjct: 1   MAVN-GCISPVPYDNDEDEDGPAIFKRPSSSKNGQINSSLKKPASQNHYNSSLGRTTSNK 59

Query: 268 NARNGESSSSQTAKATSNVKLSTEKPGVVSSNSRASAPNQLNHSSKNGLSNSSAKNLHDN 89
           ++ NGE+S+SQ  KA S VK+S + P   S  SRAS P     S+     +S A+N  D+
Sbjct: 60  HSSNGENSNSQKNKAISAVKISNQNPRSTSLVSRASVPVSNVKSTHLQRPHSEAENTDDS 119

Query: 88  XXXXXXXXXXXXXXXKPLNSRFNSASAA 5
                          KPL  R NSASAA
Sbjct: 120 ------------DDDKPLTYRLNSASAA 135


>ref|XP_020110486.1| DNA topoisomerase 1 alpha-like isoform X1 [Ananas comosus]
 gb|OAY76967.1| DNA topoisomerase 1 [Ananas comosus]
          Length = 885

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 52/148 (35%), Positives = 69/148 (46%)
 Frame = -3

Query: 448 MAVQTGCTTPVFYXXXXXXDGPAIFRRSGTAXXXXXXXXXXXXXXXXKHEETRGRHIPNQ 269
           MAV  GC +PV Y      DGPAIF+R  ++                 +  + GR   N+
Sbjct: 1   MAVN-GCISPVPYDNDEDEDGPAIFKRPSSSKNGQINSSLKKPASQNHYNSSLGRTTSNK 59

Query: 268 NARNGESSSSQTAKATSNVKLSTEKPGVVSSNSRASAPNQLNHSSKNGLSNSSAKNLHDN 89
           ++ NGE+S+SQ  KA S VK+S + P   S  SRAS P     S+     +S A+N  D+
Sbjct: 60  HSSNGENSNSQKNKAISAVKISNQNPRSTSLVSRASVPVSNVKSTHLQRPHSEAENTDDS 119

Query: 88  XXXXXXXXXXXXXXXKPLNSRFNSASAA 5
                          KPL  R NSASAA
Sbjct: 120 ------------DDDKPLTYRLNSASAA 135