BLASTX nr result

ID: Ophiopogon24_contig00016775 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00016775
         (1208 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PHT37476.1| hypothetical protein CQW23_21049 [Capsicum baccatum]    52   2e-06

>gb|PHT37476.1| hypothetical protein CQW23_21049 [Capsicum baccatum]
          Length = 2172

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 24/39 (61%), Positives = 28/39 (71%)
 Frame = -2

Query: 1141 KLSVA*TSM*KWMCGNTLRDRIRNECIHNKLSVAFIEDK 1025
            KL VA   M +WMCG T RDR+RNE I NK+ VA +EDK
Sbjct: 60   KLKVAEMRMLRWMCGLTKRDRVRNEIIRNKVGVALVEDK 98



 Score = 30.0 bits (66), Expect(2) = 2e-06
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 1005 GHAQQGQLSVSVKRDNRVIVDGAVRTRGRPKR 910
            GH  +  +   V+R  R+ +DG  R RGRPK+
Sbjct: 108  GHVMRRGVDAPVRRCERLALDGFRRKRGRPKK 139


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