BLASTX nr result

ID: Ophiopogon24_contig00016772 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00016772
         (444 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK72378.1| uncharacterized protein A4U43_C04F18790 [Asparagu...   139   2e-35
ref|XP_020262799.1| sister chromatid cohesion 1 protein 4-like [...   139   2e-35
ref|XP_020248467.1| sister chromatid cohesion 1 protein 4-like [...    68   2e-10
ref|XP_008807251.1| PREDICTED: sister chromatid cohesion 1 prote...    60   2e-07

>gb|ONK72378.1| uncharacterized protein A4U43_C04F18790 [Asparagus officinalis]
          Length = 1222

 Score =  139 bits (351), Expect = 2e-35
 Identities = 80/170 (47%), Positives = 102/170 (60%), Gaps = 30/170 (17%)
 Frame = -1

Query: 423  LPGNTISRDLDADICASPEQNSLN----NSHELAEVNN---------------------- 322
            +P ++ + +   D+    +QNSLN    NSHELA+VNN                      
Sbjct: 849  VPTDSRAEEKHHDMSTELDQNSLNKVYQNSHELAKVNNTTLNAGLPSIEGFTSAECASRY 908

Query: 321  ----NIVHVAAKNETSLQGKDFSNAKDVSITVEDMGVDIVNVANLDCPRDGSANIGKDEN 154
                N+    A N+TSLQ  DFSN    SITVEDMGVDIVN+ N +CP+D  AN+ K+E+
Sbjct: 909  LVNNNVGPANANNDTSLQVDDFSNGNAASITVEDMGVDIVNITNAECPQDNPANMSKNED 968

Query: 153  GGTAVSVLDRFIVEVGADFPADSSTVIGHANSSVPVMSLVDGGPASSEYR 4
            G T  S+LDRFI EVG DFPADSST++GHAN SVP + LVDG P +  Y+
Sbjct: 969  GETQASMLDRFIDEVGTDFPADSSTIVGHAN-SVPDLGLVDGEPVTRAYQ 1017


>ref|XP_020262799.1| sister chromatid cohesion 1 protein 4-like [Asparagus officinalis]
          Length = 1236

 Score =  139 bits (351), Expect = 2e-35
 Identities = 80/170 (47%), Positives = 102/170 (60%), Gaps = 30/170 (17%)
 Frame = -1

Query: 423  LPGNTISRDLDADICASPEQNSLN----NSHELAEVNN---------------------- 322
            +P ++ + +   D+    +QNSLN    NSHELA+VNN                      
Sbjct: 863  VPTDSRAEEKHHDMSTELDQNSLNKVYQNSHELAKVNNTTLNAGLPSIEGFTSAECASRY 922

Query: 321  ----NIVHVAAKNETSLQGKDFSNAKDVSITVEDMGVDIVNVANLDCPRDGSANIGKDEN 154
                N+    A N+TSLQ  DFSN    SITVEDMGVDIVN+ N +CP+D  AN+ K+E+
Sbjct: 923  LVNNNVGPANANNDTSLQVDDFSNGNAASITVEDMGVDIVNITNAECPQDNPANMSKNED 982

Query: 153  GGTAVSVLDRFIVEVGADFPADSSTVIGHANSSVPVMSLVDGGPASSEYR 4
            G T  S+LDRFI EVG DFPADSST++GHAN SVP + LVDG P +  Y+
Sbjct: 983  GETQASMLDRFIDEVGTDFPADSSTIVGHAN-SVPDLGLVDGEPVTRAYQ 1031


>ref|XP_020248467.1| sister chromatid cohesion 1 protein 4-like [Asparagus officinalis]
 gb|ONK56901.1| uncharacterized protein A4U43_C10F14450 [Asparagus officinalis]
          Length = 1217

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 27/113 (23%)
 Frame = -1

Query: 423  LPGNTISRDLDADICASPEQNSLNNSHELAEVNNNIVHV--------------------- 307
            LP ++   +   DIC  P+QNS    HEL EVNNN +HV                     
Sbjct: 902  LPTDSRIEEKHDDICPDPDQNS---HHELVEVNNNTLHVGESTSFEDFTSDYAAGDGVIN 958

Query: 306  ------AAKNETSLQGKDFSNAKDVSITVEDMGVDIVNVANLDCPRDGSANIG 166
                  A  N   L+  +FSN++  SITVEDMGVD++ V +LDCP D    IG
Sbjct: 959  NNIVLGATSNNILLEVDNFSNSRAASITVEDMGVDMIPVPSLDCPLDSVQAIG 1011


>ref|XP_008807251.1| PREDICTED: sister chromatid cohesion 1 protein 4-like [Phoenix
            dactylifera]
          Length = 1259

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
 Frame = -1

Query: 405  SRDLDADICASPEQNSLNNSHELA----EVNNNIVHVAAKNETSLQGKDFSNAKDVSITV 238
            S+ +D DIC   E+ S + S +LA    E+NN  +HV     TS  G  F+  +    +V
Sbjct: 924  SKKID-DICMHSERQSQHESIQLANNLSEMNNKALHVT--ENTSFIGLAFAEDETRGASV 980

Query: 237  EDMGVDIVNVANLDCPRDGSANIGKDENGGTAVSVLDRFIVEVGADFPADSSTVIGHANS 58
             +    + +  N++C +D  A++GK+ +  T VSV D  ++EV A   AD  T I  +N 
Sbjct: 981  LEGNGSVADAININCQQDAHADVGKNGHDETLVSVQDSCLLEVEAGLQAD-LTSIRDSNC 1039

Query: 57   SVPVMSLVDGGPA 19
            S+P + + +G  A
Sbjct: 1040 SIPDVGMENGETA 1052


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