BLASTX nr result

ID: Ophiopogon24_contig00016237 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00016237
         (575 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK62964.1| uncharacterized protein A4U43_C07F9950 [Asparagus...    58   2e-06
ref|XP_020274321.1| translocase of chloroplast 159, chloroplasti...    58   2e-06

>gb|ONK62964.1| uncharacterized protein A4U43_C07F9950 [Asparagus officinalis]
          Length = 1321

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
 Frame = -3

Query: 384 IQEPEKNTESMYVGKAETEKDVAVDIVGSDKNLEEVSEEDSKHVEVELDAAE-------- 229
           IQEPE+ T+S      ETE+DV VD+VGSD+NLEE +E   K VEVE++AA+        
Sbjct: 229 IQEPEEETDSK--PSVETERDVDVDLVGSDQNLEEAAEA-LKPVEVEINAADTDMVESNA 285

Query: 228 -DAPKLDIXXXXXXXXXXXXXXXXXXASEKEADVVDESTELKAAKEVDDDEGTDAVVA-- 58
            +  +++                    ++ E ++VD S E K A         +AVVA  
Sbjct: 286 AEKEEMNAAVPEKDTEVINKEEVNSALAQNETEIVDGSVESKVA---------EAVVAEN 336

Query: 57  -EETEPKAVAEDIGAVSQ 7
            E+T+  A+++++ A ++
Sbjct: 337 LEDTDSLAMSQEVHAATE 354


>ref|XP_020274321.1| translocase of chloroplast 159, chloroplastic-like [Asparagus
           officinalis]
          Length = 1356

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
 Frame = -3

Query: 384 IQEPEKNTESMYVGKAETEKDVAVDIVGSDKNLEEVSEEDSKHVEVELDAAE-------- 229
           IQEPE+ T+S      ETE+DV VD+VGSD+NLEE +E   K VEVE++AA+        
Sbjct: 229 IQEPEEETDSK--PSVETERDVDVDLVGSDQNLEEAAEA-LKPVEVEINAADTDMVESNA 285

Query: 228 -DAPKLDIXXXXXXXXXXXXXXXXXXASEKEADVVDESTELKAAKEVDDDEGTDAVVA-- 58
            +  +++                    ++ E ++VD S E K A         +AVVA  
Sbjct: 286 AEKEEMNAAVPEKDTEVINKEEVNSALAQNETEIVDGSVESKVA---------EAVVAEN 336

Query: 57  -EETEPKAVAEDIGAVSQ 7
            E+T+  A+++++ A ++
Sbjct: 337 LEDTDSLAMSQEVHAATE 354


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