BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00016231
         (2064 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK73338.1| uncharacterized protein A4U43_C04F29910 [Asparagu...   901   0.0  
ref|XP_020262150.1| DNA-directed RNA polymerase IV subunit 1 [As...   901   0.0  
ref|XP_017700627.1| PREDICTED: DNA-directed RNA polymerase IV su...   752   0.0  
ref|XP_017700629.1| PREDICTED: DNA-directed RNA polymerase IV su...   746   0.0  
ref|XP_019705595.1| PREDICTED: DNA-directed RNA polymerase IV su...   723   0.0  
ref|XP_020084502.1| DNA-directed RNA polymerase IV subunit 1 iso...   612   0.0  
ref|XP_010278507.1| PREDICTED: DNA-directed RNA polymerase IV su...   618   0.0  
ref|XP_010278508.1| PREDICTED: DNA-directed RNA polymerase IV su...   612   0.0  
ref|XP_019055894.1| PREDICTED: DNA-directed RNA polymerase IV su...   612   0.0  
ref|XP_019055893.1| PREDICTED: DNA-directed RNA polymerase IV su...   612   0.0  
ref|XP_019055892.1| PREDICTED: DNA-directed RNA polymerase IV su...   612   0.0  
ref|XP_019055891.1| PREDICTED: DNA-directed RNA polymerase IV su...   612   0.0  
ref|XP_019055889.1| PREDICTED: DNA-directed RNA polymerase IV su...   612   0.0  
ref|XP_020084500.1| DNA-directed RNA polymerase IV subunit 1 iso...   612   0.0  
gb|OAY84267.1| DNA-directed RNA polymerase IV subunit 1 [Ananas ...   612   0.0  
ref|XP_021318621.1| DNA-directed RNA polymerase IV subunit 1 iso...   592   0.0  
ref|XP_020165521.1| DNA-directed RNA polymerase IV subunit 1 iso...   597   0.0  
ref|XP_020165520.1| DNA-directed RNA polymerase IV subunit 1 iso...   597   0.0  
ref|XP_020572389.1| DNA-directed RNA polymerase IV subunit 1 iso...   595   0.0  
ref|XP_015637043.1| PREDICTED: DNA-directed RNA polymerase IV su...   590   0.0  

>gb|ONK73338.1| uncharacterized protein A4U43_C04F29910 [Asparagus officinalis]
          Length = 1445

 Score =  901 bits (2328), Expect = 0.0
 Identities = 458/673 (68%), Positives = 539/673 (80%)
 Frame = -2

Query: 2063 ENSYAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGT 1884
            ENSYAVIEASFLDGL+PLECF HAL+CR+NMFSENA++PGTLTRKIMF+MRDI VAYDGT
Sbjct: 788  ENSYAVIEASFLDGLNPLECFFHALACRANMFSENAQVPGTLTRKIMFHMRDIYVAYDGT 847

Query: 1883 VRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYG 1704
            VRN+YGQQ+VQFS+ SP +KS     +S FSI EDS   +L G PVGSLAACSISEAAYG
Sbjct: 848  VRNSYGQQVVQFSHQSPYEKS----RNSQFSI-EDS---QLSGQPVGSLAACSISEAAYG 899

Query: 1703 ALDHPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHL 1524
            ALD PVNSLESSPLLNLKKVLEC P +TS  RTASL LSNKL++LNYGFEYGALAV++HL
Sbjct: 900  ALDTPVNSLESSPLLNLKKVLECVPGKTSTERTASLVLSNKLRKLNYGFEYGALAVRDHL 959

Query: 1523 DRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGN 1344
            D+VFFSD+VTSVMIFY+A D K TKG +LSPWV HFH+NKE + +K I+ QSIVDAL+GN
Sbjct: 960  DKVFFSDVVTSVMIFYAARDIKETKGPKLSPWVSHFHINKERMAKKGIHAQSIVDALSGN 1019

Query: 1343 YNCFREGRKLPRLFMTSQSCVLGNEQKNLEELCISVGAVESSERKEQDEPSPTLLDTIRD 1164
            Y+ FREG+ LPRLFMT Q+C+L N  KN EE CI V A        +D  SPT+LD IRD
Sbjct: 1020 YHLFREGKMLPRLFMTCQNCLLDNA-KNFEESCILVTA--------EDYNSPTILDIIRD 1070

Query: 1163 SVMPVLLQTLIKGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPI 984
            +V+PVLLQTLIKGF EFKQVDILWDS  KPDG+L +K+ M +SC  R FW  LQ+AC+PI
Sbjct: 1071 TVIPVLLQTLIKGFTEFKQVDILWDSHSKPDGELIVKVTMAKSCALRNFWHALQNACIPI 1130

Query: 983  MDMIDWERSRPDGVHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVT 804
            MD+IDW RS PDGV+DIS+ FGI+S+Y+YFL SLKS +SDIGRNIHLEHLLLVSDSLSVT
Sbjct: 1131 MDLIDWGRSHPDGVYDISNAFGIVSAYNYFLRSLKSTISDIGRNIHLEHLLLVSDSLSVT 1190

Query: 803  GEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQE 624
            GEFHGL+AK +KQQ+AHLSIS+PFT+ACFSNPEK FI+AAK    D+L GTVDAVAWGQE
Sbjct: 1191 GEFHGLTAKALKQQKAHLSISAPFTEACFSNPEKSFIDAAKQGLADNLQGTVDAVAWGQE 1250

Query: 623  APVGTGGPFKIIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNAGGSM 444
            APVGTGG FK++YSGK H PK ++N+YE LL  K D   Q P ADKW  +  V N  GSM
Sbjct: 1251 APVGTGGSFKLMYSGKAHIPKPSDNVYETLLSLKSDKPWQTPNADKW-WRGAVSNISGSM 1309

Query: 443  RRWNEHNCTTKKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSL 264
            + W+  N T++K+  V  SS+  S+ IGSW +I AM S+L R+LHQY ++H LNE DKSL
Sbjct: 1310 KTWDGFNFTSEKKTMVRSSSKSDSMPIGSWSSIEAMRSALRRILHQYSIDHHLNEVDKSL 1369

Query: 263  LMEALMYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQ 84
            ++EALMYHPKKDA           G  P+HP++RCFILIR+DGTTEDFSY KCV EAA Q
Sbjct: 1370 VIEALMYHPKKDAKIGCGIKEIKVGCGPYHPETRCFILIRSDGTTEDFSYHKCVNEAARQ 1429

Query: 83   ISPEFGLLVEKEL 45
            +S EF L  + +L
Sbjct: 1430 LSIEFKLTKKSDL 1442


>ref|XP_020262150.1| DNA-directed RNA polymerase IV subunit 1 [Asparagus officinalis]
          Length = 1529

 Score =  901 bits (2328), Expect = 0.0
 Identities = 458/673 (68%), Positives = 539/673 (80%)
 Frame = -2

Query: 2063 ENSYAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGT 1884
            ENSYAVIEASFLDGL+PLECF HAL+CR+NMFSENA++PGTLTRKIMF+MRDI VAYDGT
Sbjct: 872  ENSYAVIEASFLDGLNPLECFFHALACRANMFSENAQVPGTLTRKIMFHMRDIYVAYDGT 931

Query: 1883 VRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYG 1704
            VRN+YGQQ+VQFS+ SP +KS     +S FSI EDS   +L G PVGSLAACSISEAAYG
Sbjct: 932  VRNSYGQQVVQFSHQSPYEKS----RNSQFSI-EDS---QLSGQPVGSLAACSISEAAYG 983

Query: 1703 ALDHPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHL 1524
            ALD PVNSLESSPLLNLKKVLEC P +TS  RTASL LSNKL++LNYGFEYGALAV++HL
Sbjct: 984  ALDTPVNSLESSPLLNLKKVLECVPGKTSTERTASLVLSNKLRKLNYGFEYGALAVRDHL 1043

Query: 1523 DRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGN 1344
            D+VFFSD+VTSVMIFY+A D K TKG +LSPWV HFH+NKE + +K I+ QSIVDAL+GN
Sbjct: 1044 DKVFFSDVVTSVMIFYAARDIKETKGPKLSPWVSHFHINKERMAKKGIHAQSIVDALSGN 1103

Query: 1343 YNCFREGRKLPRLFMTSQSCVLGNEQKNLEELCISVGAVESSERKEQDEPSPTLLDTIRD 1164
            Y+ FREG+ LPRLFMT Q+C+L N  KN EE CI V A        +D  SPT+LD IRD
Sbjct: 1104 YHLFREGKMLPRLFMTCQNCLLDNA-KNFEESCILVTA--------EDYNSPTILDIIRD 1154

Query: 1163 SVMPVLLQTLIKGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPI 984
            +V+PVLLQTLIKGF EFKQVDILWDS  KPDG+L +K+ M +SC  R FW  LQ+AC+PI
Sbjct: 1155 TVIPVLLQTLIKGFTEFKQVDILWDSHSKPDGELIVKVTMAKSCALRNFWHALQNACIPI 1214

Query: 983  MDMIDWERSRPDGVHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVT 804
            MD+IDW RS PDGV+DIS+ FGI+S+Y+YFL SLKS +SDIGRNIHLEHLLLVSDSLSVT
Sbjct: 1215 MDLIDWGRSHPDGVYDISNAFGIVSAYNYFLRSLKSTISDIGRNIHLEHLLLVSDSLSVT 1274

Query: 803  GEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQE 624
            GEFHGL+AK +KQQ+AHLSIS+PFT+ACFSNPEK FI+AAK    D+L GTVDAVAWGQE
Sbjct: 1275 GEFHGLTAKALKQQKAHLSISAPFTEACFSNPEKSFIDAAKQGLADNLQGTVDAVAWGQE 1334

Query: 623  APVGTGGPFKIIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNAGGSM 444
            APVGTGG FK++YSGK H PK ++N+YE LL  K D   Q P ADKW  +  V N  GSM
Sbjct: 1335 APVGTGGSFKLMYSGKAHIPKPSDNVYETLLSLKSDKPWQTPNADKW-WRGAVSNISGSM 1393

Query: 443  RRWNEHNCTTKKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSL 264
            + W+  N T++K+  V  SS+  S+ IGSW +I AM S+L R+LHQY ++H LNE DKSL
Sbjct: 1394 KTWDGFNFTSEKKTMVRSSSKSDSMPIGSWSSIEAMRSALRRILHQYSIDHHLNEVDKSL 1453

Query: 263  LMEALMYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQ 84
            ++EALMYHPKKDA           G  P+HP++RCFILIR+DGTTEDFSY KCV EAA Q
Sbjct: 1454 VIEALMYHPKKDAKIGCGIKEIKVGCGPYHPETRCFILIRSDGTTEDFSYHKCVNEAARQ 1513

Query: 83   ISPEFGLLVEKEL 45
            +S EF L  + +L
Sbjct: 1514 LSIEFKLTKKSDL 1526


>ref|XP_017700627.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Phoenix dactylifera]
 ref|XP_017700628.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Phoenix dactylifera]
          Length = 1567

 Score =  752 bits (1942), Expect = 0.0
 Identities = 395/721 (54%), Positives = 499/721 (69%), Gaps = 44/721 (6%)
 Frame = -2

Query: 2063 ENSYAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGT 1884
            +NSYAV++ASFLDGL+PLECFVHA++ RSNMFSENAELPG LTRK+MFYMRD+  AYDGT
Sbjct: 857  QNSYAVVKASFLDGLNPLECFVHAITGRSNMFSENAELPGMLTRKLMFYMRDLYAAYDGT 916

Query: 1883 VRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYG 1704
            VR+ YGQQLVQFSY  P + S E  D    +  +D+  +RLGG PVGS A+C+ISEAAYG
Sbjct: 917  VRSTYGQQLVQFSYNIPGESSSEQGDSCTMNGEKDAENNRLGGQPVGSWASCAISEAAYG 976

Query: 1703 ALDHPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHL 1524
            ALDHP+NSLE+SPLLNLKKVLEC  +R SV+++AS+ LS  LK+  YGFEYGAL VKNHL
Sbjct: 977  ALDHPMNSLEASPLLNLKKVLECGKSRASVDKSASIFLSKGLKKQRYGFEYGALEVKNHL 1036

Query: 1523 DRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGN 1344
            DRV FSD+VT+V+IFY+  D +GTK    SPW+ HFHV+KE ++RKR+ VQ+I+D L+ N
Sbjct: 1037 DRVLFSDLVTTVLIFYAGLDVQGTK---FSPWITHFHVSKERMMRKRLRVQTIIDQLSAN 1093

Query: 1343 YNCFRE--GRKLPRLFMTSQSCVLGNEQKNLEELCISVGAVESSERKEQDEPSPTLLDTI 1170
            YN  RE  G +LP L +TS+ C L + Q   +E    +  V++ E + Q       LDTI
Sbjct: 1094 YNFVRETVGTELPGLRITSKDCSLIDIQNEHDETFCIMVLVDTPESEIQ-------LDTI 1146

Query: 1169 RDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACL 990
            RD ++P+LL+TL+KGF EFK+V+IL D QP    +LFL++ M E C P KFW  LQ+AC+
Sbjct: 1147 RDVLVPLLLETLVKGFWEFKKVEILCDIQPDSLDELFLRVSMSEKCLPGKFWSALQNACI 1206

Query: 989  PIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLS 810
            PIMD+IDWE S P+ ++DI  ++GI +++ YFL  LKSA SD GR IH EHLL+ +D LS
Sbjct: 1207 PIMDLIDWEHSHPNSMYDIFSIYGIDAAWKYFLRHLKSATSDTGRCIHEEHLLMAADCLS 1266

Query: 809  VTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWG 630
            VTGEFHGLS KG+K+QR   SISSPFT AC SNP   FI AAK  S DHL GT+DA+AWG
Sbjct: 1267 VTGEFHGLSIKGLKKQRDQASISSPFTLACLSNPGYGFINAAKQGSVDHLGGTLDAMAWG 1326

Query: 629  QEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQKHDSSSQIPG----------ADKWK 480
            +EAPVGTGGPF+IIYSGKVH+P++TENIY+ LL  K +   Q             + KWK
Sbjct: 1327 KEAPVGTGGPFEIIYSGKVHNPQKTENIYKTLLNFKVEKPWQDDNKLCRHGDRNVSTKWK 1386

Query: 479  AQPGVDNAGGS------------------------MRRWNEH--------NCTTKKEKNV 396
             +  + N G S                        + +W           + ++  +  +
Sbjct: 1387 HKRILSNTGASTGESIDQLISEEAHTRQGCPCEYPVNKWERQSKGHVVSSSVSSNSDAKM 1446

Query: 395  VFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXX 216
             FS++ A    GSW NI  M S+L  +LH+YP+N  LNE DKS LMEAL YHPK+DA   
Sbjct: 1447 GFSTKSALRSAGSWANIVDMCSNLRTILHEYPINGYLNETDKSCLMEALSYHPKRDAKMG 1506

Query: 215  XXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVEKELDSR 36
                    GHSP HP SRCF+L+RNDGTTEDFSYRKC+I AA  ISPEFG +VEK++  R
Sbjct: 1507 TGIQGIKIGHSPLHPGSRCFVLVRNDGTTEDFSYRKCIIGAAYSISPEFGSMVEKKMSWR 1566

Query: 35   Q 33
            +
Sbjct: 1567 R 1567


>ref|XP_017700629.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Phoenix dactylifera]
          Length = 1566

 Score =  746 bits (1925), Expect = 0.0
 Identities = 394/721 (54%), Positives = 498/721 (69%), Gaps = 44/721 (6%)
 Frame = -2

Query: 2063 ENSYAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGT 1884
            +NSYAV++ASFLDGL+PLECFVHA++ RSNMFSENAELPG LTRK+MFYMRD+  AYDGT
Sbjct: 857  QNSYAVVKASFLDGLNPLECFVHAITGRSNMFSENAELPGMLTRKLMFYMRDLYAAYDGT 916

Query: 1883 VRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYG 1704
            VR+ YGQQLVQFSY  P + S E  D    +  +D+  +RLGG PVGS A+C+ISEAAYG
Sbjct: 917  VRSTYGQQLVQFSYNIPGESSSEQGDSCTMNGEKDAENNRLGGQPVGSWASCAISEAAYG 976

Query: 1703 ALDHPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHL 1524
            ALDHP+NSLE+SPLLNLK VLEC  +R SV+++AS+ LS  LK+  YGFEYGAL VKNHL
Sbjct: 977  ALDHPMNSLEASPLLNLK-VLECGKSRASVDKSASIFLSKGLKKQRYGFEYGALEVKNHL 1035

Query: 1523 DRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGN 1344
            DRV FSD+VT+V+IFY+  D +GTK    SPW+ HFHV+KE ++RKR+ VQ+I+D L+ N
Sbjct: 1036 DRVLFSDLVTTVLIFYAGLDVQGTK---FSPWITHFHVSKERMMRKRLRVQTIIDQLSAN 1092

Query: 1343 YNCFRE--GRKLPRLFMTSQSCVLGNEQKNLEELCISVGAVESSERKEQDEPSPTLLDTI 1170
            YN  RE  G +LP L +TS+ C L + Q   +E    +  V++ E + Q       LDTI
Sbjct: 1093 YNFVRETVGTELPGLRITSKDCSLIDIQNEHDETFCIMVLVDTPESEIQ-------LDTI 1145

Query: 1169 RDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACL 990
            RD ++P+LL+TL+KGF EFK+V+IL D QP    +LFL++ M E C P KFW  LQ+AC+
Sbjct: 1146 RDVLVPLLLETLVKGFWEFKKVEILCDIQPDSLDELFLRVSMSEKCLPGKFWSALQNACI 1205

Query: 989  PIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLS 810
            PIMD+IDWE S P+ ++DI  ++GI +++ YFL  LKSA SD GR IH EHLL+ +D LS
Sbjct: 1206 PIMDLIDWEHSHPNSMYDIFSIYGIDAAWKYFLRHLKSATSDTGRCIHEEHLLMAADCLS 1265

Query: 809  VTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWG 630
            VTGEFHGLS KG+K+QR   SISSPFT AC SNP   FI AAK  S DHL GT+DA+AWG
Sbjct: 1266 VTGEFHGLSIKGLKKQRDQASISSPFTLACLSNPGYGFINAAKQGSVDHLGGTLDAMAWG 1325

Query: 629  QEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQKHDSSSQIPG----------ADKWK 480
            +EAPVGTGGPF+IIYSGKVH+P++TENIY+ LL  K +   Q             + KWK
Sbjct: 1326 KEAPVGTGGPFEIIYSGKVHNPQKTENIYKTLLNFKVEKPWQDDNKLCRHGDRNVSTKWK 1385

Query: 479  AQPGVDNAGGS------------------------MRRWNEH--------NCTTKKEKNV 396
             +  + N G S                        + +W           + ++  +  +
Sbjct: 1386 HKRILSNTGASTGESIDQLISEEAHTRQGCPCEYPVNKWERQSKGHVVSSSVSSNSDAKM 1445

Query: 395  VFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXX 216
             FS++ A    GSW NI  M S+L  +LH+YP+N  LNE DKS LMEAL YHPK+DA   
Sbjct: 1446 GFSTKSALRSAGSWANIVDMCSNLRTILHEYPINGYLNETDKSCLMEALSYHPKRDAKMG 1505

Query: 215  XXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVEKELDSR 36
                    GHSP HP SRCF+L+RNDGTTEDFSYRKC+I AA  ISPEFG +VEK++  R
Sbjct: 1506 TGIQGIKIGHSPLHPGSRCFVLVRNDGTTEDFSYRKCIIGAAYSISPEFGSMVEKKMSWR 1565

Query: 35   Q 33
            +
Sbjct: 1566 R 1566


>ref|XP_019705595.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Elaeis
            guineensis]
          Length = 1569

 Score =  723 bits (1867), Expect = 0.0
 Identities = 387/722 (53%), Positives = 493/722 (68%), Gaps = 49/722 (6%)
 Frame = -2

Query: 2063 ENSYAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGT 1884
            +NSYAV++ASFLDGL+PLECFVHA++ RSNMFSENAELPG LTRK+MFYMRD+  AYDGT
Sbjct: 857  QNSYAVVKASFLDGLNPLECFVHAITGRSNMFSENAELPGMLTRKLMFYMRDLYAAYDGT 916

Query: 1883 VRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSIGE-DSACDRLGGHPVGSLAACSISEAAY 1707
            VR+ YGQQLVQFSY  P K S E+ D S  + GE D+  + LGG PVGS AAC+ISEAAY
Sbjct: 917  VRSTYGQQLVQFSYNIPGKSSGEEGD-SCMTYGENDAENNSLGGQPVGSWAACAISEAAY 975

Query: 1706 GALDHPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNH 1527
            GALDHP+NSLE+SPL+NLKKVL+C  T+ S++++AS+ LS  LK+  YGFEYGAL VKNH
Sbjct: 976  GALDHPMNSLEASPLMNLKKVLDCGKTKASMDKSASIFLSKGLKKQRYGFEYGALEVKNH 1035

Query: 1526 LDRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAG 1347
            LDRV FSD+VT+++IFY+  D +GTK    SPW+ HFHV+KE ++RKR+  Q+I+D L+G
Sbjct: 1036 LDRVLFSDLVTTILIFYAGLDVQGTK---FSPWITHFHVSKERMMRKRLRAQTIIDQLSG 1092

Query: 1346 NYNCFRE--GRKLPRLFMTSQSCVLGNEQKNLEE-LCISVGAVESSERKEQDEPSPTL-L 1179
            NYN  RE  G +LP L ++S+ C L + Q   +E  C++V           D P   + L
Sbjct: 1093 NYNFVRETVGTELPVLHISSKDCSLIDIQNEHDETFCVTVLV---------DAPKSDIQL 1143

Query: 1178 DTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQS 999
            DTIRD ++P+LL+TLIKGF EFK+V+IL D Q      LFL++ M E C P KFW  LQ+
Sbjct: 1144 DTIRDVIIPLLLETLIKGFWEFKKVEILCDIQRDSLDGLFLRVTMSEKCLPGKFWSALQN 1203

Query: 998  ACLPIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSD 819
            AC+PIMD+IDWE+S P+ ++DI  ++GI +++ YFL  LKSA SDIGR +H EHLL+ +D
Sbjct: 1204 ACIPIMDLIDWEQSHPNSMYDIFSIYGIDAAWKYFLKYLKSATSDIGRCMHEEHLLMAAD 1263

Query: 818  SLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAV 639
             LSVTGEFHGLS KG+K+QR   SISSPFT AC SNP   FI AAK  S DHL GT+DA+
Sbjct: 1264 CLSVTGEFHGLSTKGLKKQRDQASISSPFTLACLSNPGNGFINAAKQGSVDHLCGTLDAM 1323

Query: 638  AWGQEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQKHDSSSQIPG----------AD 489
            AWG+EAP+GTGGPF+IIYSGKVH+ ++ ENIY+ L+  K +   Q             + 
Sbjct: 1324 AWGKEAPIGTGGPFEIIYSGKVHNSQKNENIYKTLMNFKVEKPWQDDNKLCRHGDKNVST 1383

Query: 488  KWKAQPGVDNAGGS------------------------MRRWNE----HNCTTKKEKN-- 399
            KWK +  + NA  S                        + +W      H  ++    N  
Sbjct: 1384 KWKHKRILSNADASTGESIDQLISDEACMGQGCPCENPVNKWERQSKGHLVSSNAGSNSD 1443

Query: 398  ----VVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKK 231
                + F  + A    GSW NI  M S+L  +LH+YP+N  LNE DKS LMEAL YHPK+
Sbjct: 1444 IKTTLGFRKRSALSSAGSWANIVDMCSNLRTILHEYPINGYLNETDKSCLMEALSYHPKR 1503

Query: 230  DAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVEK 51
            +A           GHSP HP SRCF+L+RNDGTTEDFSYRKC+I AA  IS E G ++EK
Sbjct: 1504 EAKMGTGVQGIKIGHSPLHPGSRCFVLVRNDGTTEDFSYRKCIIGAAYNISRELGSVIEK 1563

Query: 50   EL 45
            ++
Sbjct: 1564 KM 1565


>ref|XP_020084502.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Ananas comosus]
          Length = 1240

 Score =  612 bits (1579), Expect = 0.0
 Identities = 344/694 (49%), Positives = 445/694 (64%), Gaps = 22/694 (3%)
 Frame = -2

Query: 2060 NSYAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGTV 1881
            N YAVI +SFL GL+PLECF+HA+S R+N F ENAE+PGTLTRK+ FY+RD+ VAYDGTV
Sbjct: 561  NFYAVIRSSFLQGLNPLECFLHAISGRANFFGENAEIPGTLTRKLSFYLRDLYVAYDGTV 620

Query: 1880 RNAYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGG--HPVGSLAACSISEAAY 1707
            R+AYGQQ+VQFSY   ++   ED  HS   I  D   ++  G   PVGS AA SISEAAY
Sbjct: 621  RSAYGQQIVQFSYDISDEIFHEDA-HSRI-ISNDHIVEKYNGLGAPVGSWAASSISEAAY 678

Query: 1706 GALDHPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNH 1527
            G L+HPVNSLE SPL+ LK++LEC   RT  +    L LS  L+R  YGFEYGAL VKNH
Sbjct: 679  GGLEHPVNSLEDSPLMKLKEILECGKRRTYGDHAGILVLSKGLQRYRYGFEYGALEVKNH 738

Query: 1526 LDRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAG 1347
            L+   FS++V +VMI Y        +  ++SPW  HFH++KE + +KR+ VQ ++D L  
Sbjct: 739  LEITLFSEMVNTVMILYECP----LQRRKISPWSTHFHISKETLKKKRLQVQRVIDKLME 794

Query: 1346 NYNCFREGRK--LPRLFMTSQSCVLGNEQKNLEE-LCISVGAVESSERKEQDEPSPTLLD 1176
            NY+  RE     LP L +T ++C L +E   L++ +CI+V A        +   S T LD
Sbjct: 795  NYSLMREKSAGVLPALCITKKNCPLLDEHDELDQTVCIAVAA--------EVLDSVTQLD 846

Query: 1175 TIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPDG-QLFLKIIMEESCPPRKFWRTLQS 999
            TI+D V+ +LL TL+KGF   K V+I    Q +PD  +L LK+ M ESC   +FW TLQ 
Sbjct: 847  TIKDVVILILLNTLVKGFLGIKHVEI----QCQPDSTELSLKVTMSESCSRGRFWSTLQD 902

Query: 998  ACLPIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSD 819
            AC+PIMD+IDW  S P+ ++D   V+GI +++ YFL SLKSA S IGR+IH E L+ V+D
Sbjct: 903  ACIPIMDLIDWNSSHPESIYDTFTVYGIDAAWKYFLKSLKSATSGIGRHIHQEQLVTVAD 962

Query: 818  SLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAV 639
              SVTGEFHGLS KG+KQQR  LSISSPF+ ACFS+P   FI AAK  S D L G +DAV
Sbjct: 963  CFSVTGEFHGLSTKGLKQQRNRLSISSPFSHACFSSPGNNFINAAKKGSVDELCGILDAV 1022

Query: 638  AWGQEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGA---------DK 486
            +WG+E PVGTGGPF+II+S KV   +++E+IY++L   K +                  K
Sbjct: 1023 SWGKEPPVGTGGPFEIIFSQKVPQLQKSESIYKVLHNLKVEEPKPESAVACRASNRSNSK 1082

Query: 485  WKAQ-PGVDNA-GGSMRRW--NEHNCTTKKE---KNVVFSSQPASVRIGSWDNISAMSSS 327
            W+   P   N   G   +W  N +   T+ E   K +   S+    ++GSW +I  M +S
Sbjct: 1083 WRLNIPTFANGHAGKKDKWKCNFNKGATQTEGRPKKLAVQSEFLMRKVGSWASIVDMCTS 1142

Query: 326  LSRMLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILI 147
            L  MLH+YP +  + E DKS LMEAL YHPK+D            GH P H  SRCFIL+
Sbjct: 1143 LRAMLHEYPYDGIVGEKDKSSLMEALKYHPKRDEKIGVGVQDIKIGHHPTHRCSRCFILV 1202

Query: 146  RNDGTTEDFSYRKCVIEAANQISPEFGLLVEKEL 45
            R DGT +DFSYRKCV+ AA  +S EFG +VEK+L
Sbjct: 1203 RKDGTMDDFSYRKCVVGAAKMLSTEFGSIVEKKL 1236


>ref|XP_010278507.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X4
            [Nelumbo nucifera]
          Length = 1489

 Score =  618 bits (1594), Expect = 0.0
 Identities = 341/696 (48%), Positives = 449/696 (64%), Gaps = 35/696 (5%)
 Frame = -2

Query: 2054 YAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGTVRN 1875
            YAV+E SFLDGL+PLECFVH++S R N F ENA+LPGTLTRK+MFYMRD+ +AYDGTVR 
Sbjct: 802  YAVVENSFLDGLNPLECFVHSVSTRDNSFGENADLPGTLTRKLMFYMRDLYIAYDGTVRT 861

Query: 1874 AYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYGALD 1695
            AYG QLVQFSYG  +  S +D        G  +A D +GG PVGSL+ACSISEAAY ALD
Sbjct: 862  AYGNQLVQFSYGCFKGDSVQD--PCGLFGGSPNAYDGVGGQPVGSLSACSISEAAYSALD 919

Query: 1694 HPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHLDRV 1515
             P++ LE SPLLNLKKVLEC     S ++TASL LS KL R   GFEYGA  VKNHL+RV
Sbjct: 920  QPISKLEISPLLNLKKVLECGQKNASADQTASLFLSKKLGRWICGFEYGATEVKNHLERV 979

Query: 1514 FFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGNY-- 1341
            FFSD+V++VM+ +S    +    M  SPWV HFHV KEM+ R+ +N+QSI+DAL  N   
Sbjct: 980  FFSDVVSTVMVIFSP---QRHSQMSASPWVCHFHVCKEMMERRGLNIQSIIDALQRNSTG 1036

Query: 1340 --------NCFREGRK------------LPRLFMTSQSCVLGNEQKNLEELCISVGAVES 1221
                    N   E RK            LP L + S+ C   ++++N    CI V    +
Sbjct: 1037 EQAKINLRNILNELRKKYKLSGKQVKIKLPNLMILSRDCTFIDQRENGRTFCIVVIVEIT 1096

Query: 1220 SERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPD-------GQL 1062
             +  +Q       LDT+RD V+P L +T+IKGF EFK VDILW+  P+         G+L
Sbjct: 1097 KDSSKQ-------LDTVRDLVVPFLSRTVIKGFLEFKSVDILWNDLPQSSKSHMFSSGEL 1149

Query: 1061 FLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSL 882
            +LK+ M E C   KFW +LQ+ACLP+MD+IDWERS PD +++I   +GI + + YFL SL
Sbjct: 1150 YLKVFMSEDCERTKFWSSLQNACLPVMDLIDWERSYPDNIYNIVCAYGIDAGWKYFLRSL 1209

Query: 881  KSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEK 702
            K A+SDIG+ + LEHLLLV++SLS TGEF GLSAKGIK+Q    S+SSPF QACFSNP  
Sbjct: 1210 KFALSDIGKTVLLEHLLLVANSLSFTGEFLGLSAKGIKRQMDQASVSSPFMQACFSNPGA 1269

Query: 701  CFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQK 522
            CFI+AAK  + D L G +D+V+WG++ P+GTGG F I+YSGK  +P +  NIY  L    
Sbjct: 1270 CFIKAAKEGAVDDLQGILDSVSWGKKVPIGTGGHFDILYSGKGFTPAKPTNIYSALC--- 1326

Query: 521  HDSSSQIPGADKWKAQPGVDNAGGSM-RRWNEHNCTTKKE---KNVVFSSQPASV--RIG 360
            H+S S          + G+ +A   +  +W + +    K+   K     + P+SV   I 
Sbjct: 1327 HESKSH-----GENVETGLTDACRKVCCKWEKQSFYASKDPLPKGDSSENLPSSVLRSIY 1381

Query: 359  SWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXGHSP 180
            S +++  ++SSL  +LH+YP+N  L+E DKS+L+ AL +HPK++            G+  
Sbjct: 1382 SREDVLKLNSSLKHILHKYPINDYLSEVDKSILLRALYFHPKRNQKMGTGPKDIKVGYHS 1441

Query: 179  FHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPE 72
             H +SRCF+L+R DGT EDFSYRKC++ A  +I P+
Sbjct: 1442 EHQQSRCFMLVRTDGTIEDFSYRKCILGALEKICPQ 1477


>ref|XP_010278508.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X7
            [Nelumbo nucifera]
          Length = 1373

 Score =  612 bits (1578), Expect = 0.0
 Identities = 342/703 (48%), Positives = 449/703 (63%), Gaps = 42/703 (5%)
 Frame = -2

Query: 2054 YAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGTVRN 1875
            YAV+E SFLDGL+PLECFVH++S R N F ENA+LPGTLTRK+MFYMRD+ +AYDGTVR 
Sbjct: 680  YAVVENSFLDGLNPLECFVHSVSTRDNSFGENADLPGTLTRKLMFYMRDLYIAYDGTVRT 739

Query: 1874 AYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYGALD 1695
            AYG QLVQFSYG  +  S +D        G  +A D +GG PVGSL+ACSISEAAY ALD
Sbjct: 740  AYGNQLVQFSYGCFKGDSVQD--PCGLFGGSPNAYDGVGGQPVGSLSACSISEAAYSALD 797

Query: 1694 HPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHLDRV 1515
             P++ LE SPLLNLKKVLEC     S ++TASL LS KL R   GFEYGA  VKNHL+RV
Sbjct: 798  QPISKLEISPLLNLKKVLECGQKNASADQTASLFLSKKLGRWICGFEYGATEVKNHLERV 857

Query: 1514 FFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGNY-- 1341
            FFSD+V++VM+ +S    +    M  SPWV HFHV KEM+ R+ +N+QSI+DAL  N   
Sbjct: 858  FFSDVVSTVMVIFSP---QRHSQMSASPWVCHFHVCKEMMERRGLNIQSIIDALQRNSTG 914

Query: 1340 --------NCFREGRK------------LPRLFMTSQSCVLGNEQKNLEELCISVGAVES 1221
                    N   E RK            LP L + S+ C   ++++N    CI V    +
Sbjct: 915  EQAKINLRNILNELRKKYKLSGKQVKIKLPNLMILSRDCTFIDQRENGRTFCIVVIVEIT 974

Query: 1220 SERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPD-------GQL 1062
             +  +Q       LDT+RD V+P L +T+IKGF EFK VDILW+  P+         G+L
Sbjct: 975  KDSSKQ-------LDTVRDLVVPFLSRTVIKGFLEFKSVDILWNDLPQSSKSHMFSSGEL 1027

Query: 1061 FLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSL 882
            +LK+ M E C   KFW +LQ+ACLP+MD+IDWERS PD +++I   +GI + + YFL SL
Sbjct: 1028 YLKVFMSEDCERTKFWSSLQNACLPVMDLIDWERSYPDNIYNIVCAYGIDAGWKYFLRSL 1087

Query: 881  KSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEK 702
            K A+SDIG+ + LEHLLLV++SLS TGEF GLSAKGIK+Q    S+SSPF QACFSNP  
Sbjct: 1088 KFALSDIGKTVLLEHLLLVANSLSFTGEFLGLSAKGIKRQMDQASVSSPFMQACFSNPGA 1147

Query: 701  CFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQK 522
            CFI+AAK  + D L G +D+V+WG++ P+GTGG F I+YSGK  +P +  NIY  L    
Sbjct: 1148 CFIKAAKEGAVDDLQGILDSVSWGKKVPIGTGGHFDILYSGKGFTPAKPTNIYSALC--- 1204

Query: 521  HDSSSQIPGADKWKAQPGVDNAGGSM-RRWNEHNCTTKKE---KNVVFSSQPASV--RIG 360
            H+S S          + G+ +A   +  +W + +    K+   K     + P+SV   I 
Sbjct: 1205 HESKSH-----GENVETGLTDACRKVCCKWEKQSFYASKDPLPKGDSSENLPSSVLRSIY 1259

Query: 359  SWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKD-------AXXXXXXXX 201
            S +++  ++SSL  +LH+YP+N  L+E DKS+L+ AL +HPK++                
Sbjct: 1260 SREDVLKLNSSLKHILHKYPINDYLSEVDKSILLRALYFHPKRNQKMGTGPKDIKVLPRI 1319

Query: 200  XXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPE 72
                HS  H +SRCF+L+R DGT EDFSYRKC++ A  +I P+
Sbjct: 1320 RVGYHSE-HQQSRCFMLVRTDGTIEDFSYRKCILGALEKICPQ 1361


>ref|XP_019055894.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X6
            [Nelumbo nucifera]
          Length = 1374

 Score =  612 bits (1578), Expect = 0.0
 Identities = 342/703 (48%), Positives = 449/703 (63%), Gaps = 42/703 (5%)
 Frame = -2

Query: 2054 YAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGTVRN 1875
            YAV+E SFLDGL+PLECFVH++S R N F ENA+LPGTLTRK+MFYMRD+ +AYDGTVR 
Sbjct: 681  YAVVENSFLDGLNPLECFVHSVSTRDNSFGENADLPGTLTRKLMFYMRDLYIAYDGTVRT 740

Query: 1874 AYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYGALD 1695
            AYG QLVQFSYG  +  S +D        G  +A D +GG PVGSL+ACSISEAAY ALD
Sbjct: 741  AYGNQLVQFSYGCFKGDSVQD--PCGLFGGSPNAYDGVGGQPVGSLSACSISEAAYSALD 798

Query: 1694 HPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHLDRV 1515
             P++ LE SPLLNLKKVLEC     S ++TASL LS KL R   GFEYGA  VKNHL+RV
Sbjct: 799  QPISKLEISPLLNLKKVLECGQKNASADQTASLFLSKKLGRWICGFEYGATEVKNHLERV 858

Query: 1514 FFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGNY-- 1341
            FFSD+V++VM+ +S    +    M  SPWV HFHV KEM+ R+ +N+QSI+DAL  N   
Sbjct: 859  FFSDVVSTVMVIFSP---QRHSQMSASPWVCHFHVCKEMMERRGLNIQSIIDALQRNSTG 915

Query: 1340 --------NCFREGRK------------LPRLFMTSQSCVLGNEQKNLEELCISVGAVES 1221
                    N   E RK            LP L + S+ C   ++++N    CI V    +
Sbjct: 916  EQAKINLRNILNELRKKYKLSGKQVKIKLPNLMILSRDCTFIDQRENGRTFCIVVIVEIT 975

Query: 1220 SERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPD-------GQL 1062
             +  +Q       LDT+RD V+P L +T+IKGF EFK VDILW+  P+         G+L
Sbjct: 976  KDSSKQ-------LDTVRDLVVPFLSRTVIKGFLEFKSVDILWNDLPQSSKSHMFSSGEL 1028

Query: 1061 FLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSL 882
            +LK+ M E C   KFW +LQ+ACLP+MD+IDWERS PD +++I   +GI + + YFL SL
Sbjct: 1029 YLKVFMSEDCERTKFWSSLQNACLPVMDLIDWERSYPDNIYNIVCAYGIDAGWKYFLRSL 1088

Query: 881  KSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEK 702
            K A+SDIG+ + LEHLLLV++SLS TGEF GLSAKGIK+Q    S+SSPF QACFSNP  
Sbjct: 1089 KFALSDIGKTVLLEHLLLVANSLSFTGEFLGLSAKGIKRQMDQASVSSPFMQACFSNPGA 1148

Query: 701  CFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQK 522
            CFI+AAK  + D L G +D+V+WG++ P+GTGG F I+YSGK  +P +  NIY  L    
Sbjct: 1149 CFIKAAKEGAVDDLQGILDSVSWGKKVPIGTGGHFDILYSGKGFTPAKPTNIYSALC--- 1205

Query: 521  HDSSSQIPGADKWKAQPGVDNAGGSM-RRWNEHNCTTKKE---KNVVFSSQPASV--RIG 360
            H+S S          + G+ +A   +  +W + +    K+   K     + P+SV   I 
Sbjct: 1206 HESKSH-----GENVETGLTDACRKVCCKWEKQSFYASKDPLPKGDSSENLPSSVLRSIY 1260

Query: 359  SWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKD-------AXXXXXXXX 201
            S +++  ++SSL  +LH+YP+N  L+E DKS+L+ AL +HPK++                
Sbjct: 1261 SREDVLKLNSSLKHILHKYPINDYLSEVDKSILLRALYFHPKRNQKMGTGPKDIKVLPRI 1320

Query: 200  XXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPE 72
                HS  H +SRCF+L+R DGT EDFSYRKC++ A  +I P+
Sbjct: 1321 RVGYHSE-HQQSRCFMLVRTDGTIEDFSYRKCILGALEKICPQ 1362


>ref|XP_019055893.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X5
            [Nelumbo nucifera]
          Length = 1375

 Score =  612 bits (1578), Expect = 0.0
 Identities = 342/703 (48%), Positives = 449/703 (63%), Gaps = 42/703 (5%)
 Frame = -2

Query: 2054 YAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGTVRN 1875
            YAV+E SFLDGL+PLECFVH++S R N F ENA+LPGTLTRK+MFYMRD+ +AYDGTVR 
Sbjct: 682  YAVVENSFLDGLNPLECFVHSVSTRDNSFGENADLPGTLTRKLMFYMRDLYIAYDGTVRT 741

Query: 1874 AYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYGALD 1695
            AYG QLVQFSYG  +  S +D        G  +A D +GG PVGSL+ACSISEAAY ALD
Sbjct: 742  AYGNQLVQFSYGCFKGDSVQD--PCGLFGGSPNAYDGVGGQPVGSLSACSISEAAYSALD 799

Query: 1694 HPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHLDRV 1515
             P++ LE SPLLNLKKVLEC     S ++TASL LS KL R   GFEYGA  VKNHL+RV
Sbjct: 800  QPISKLEISPLLNLKKVLECGQKNASADQTASLFLSKKLGRWICGFEYGATEVKNHLERV 859

Query: 1514 FFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGNY-- 1341
            FFSD+V++VM+ +S    +    M  SPWV HFHV KEM+ R+ +N+QSI+DAL  N   
Sbjct: 860  FFSDVVSTVMVIFSP---QRHSQMSASPWVCHFHVCKEMMERRGLNIQSIIDALQRNSTG 916

Query: 1340 --------NCFREGRK------------LPRLFMTSQSCVLGNEQKNLEELCISVGAVES 1221
                    N   E RK            LP L + S+ C   ++++N    CI V    +
Sbjct: 917  EQAKINLRNILNELRKKYKLSGKQVKIKLPNLMILSRDCTFIDQRENGRTFCIVVIVEIT 976

Query: 1220 SERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPD-------GQL 1062
             +  +Q       LDT+RD V+P L +T+IKGF EFK VDILW+  P+         G+L
Sbjct: 977  KDSSKQ-------LDTVRDLVVPFLSRTVIKGFLEFKSVDILWNDLPQSSKSHMFSSGEL 1029

Query: 1061 FLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSL 882
            +LK+ M E C   KFW +LQ+ACLP+MD+IDWERS PD +++I   +GI + + YFL SL
Sbjct: 1030 YLKVFMSEDCERTKFWSSLQNACLPVMDLIDWERSYPDNIYNIVCAYGIDAGWKYFLRSL 1089

Query: 881  KSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEK 702
            K A+SDIG+ + LEHLLLV++SLS TGEF GLSAKGIK+Q    S+SSPF QACFSNP  
Sbjct: 1090 KFALSDIGKTVLLEHLLLVANSLSFTGEFLGLSAKGIKRQMDQASVSSPFMQACFSNPGA 1149

Query: 701  CFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQK 522
            CFI+AAK  + D L G +D+V+WG++ P+GTGG F I+YSGK  +P +  NIY  L    
Sbjct: 1150 CFIKAAKEGAVDDLQGILDSVSWGKKVPIGTGGHFDILYSGKGFTPAKPTNIYSALC--- 1206

Query: 521  HDSSSQIPGADKWKAQPGVDNAGGSM-RRWNEHNCTTKKE---KNVVFSSQPASV--RIG 360
            H+S S          + G+ +A   +  +W + +    K+   K     + P+SV   I 
Sbjct: 1207 HESKSH-----GENVETGLTDACRKVCCKWEKQSFYASKDPLPKGDSSENLPSSVLRSIY 1261

Query: 359  SWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKD-------AXXXXXXXX 201
            S +++  ++SSL  +LH+YP+N  L+E DKS+L+ AL +HPK++                
Sbjct: 1262 SREDVLKLNSSLKHILHKYPINDYLSEVDKSILLRALYFHPKRNQKMGTGPKDIKVLPRI 1321

Query: 200  XXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPE 72
                HS  H +SRCF+L+R DGT EDFSYRKC++ A  +I P+
Sbjct: 1322 RVGYHSE-HQQSRCFMLVRTDGTIEDFSYRKCILGALEKICPQ 1363


>ref|XP_019055892.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
            [Nelumbo nucifera]
          Length = 1493

 Score =  612 bits (1578), Expect = 0.0
 Identities = 342/703 (48%), Positives = 449/703 (63%), Gaps = 42/703 (5%)
 Frame = -2

Query: 2054 YAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGTVRN 1875
            YAV+E SFLDGL+PLECFVH++S R N F ENA+LPGTLTRK+MFYMRD+ +AYDGTVR 
Sbjct: 800  YAVVENSFLDGLNPLECFVHSVSTRDNSFGENADLPGTLTRKLMFYMRDLYIAYDGTVRT 859

Query: 1874 AYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYGALD 1695
            AYG QLVQFSYG  +  S +D        G  +A D +GG PVGSL+ACSISEAAY ALD
Sbjct: 860  AYGNQLVQFSYGCFKGDSVQD--PCGLFGGSPNAYDGVGGQPVGSLSACSISEAAYSALD 917

Query: 1694 HPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHLDRV 1515
             P++ LE SPLLNLKKVLEC     S ++TASL LS KL R   GFEYGA  VKNHL+RV
Sbjct: 918  QPISKLEISPLLNLKKVLECGQKNASADQTASLFLSKKLGRWICGFEYGATEVKNHLERV 977

Query: 1514 FFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGNY-- 1341
            FFSD+V++VM+ +S    +    M  SPWV HFHV KEM+ R+ +N+QSI+DAL  N   
Sbjct: 978  FFSDVVSTVMVIFSP---QRHSQMSASPWVCHFHVCKEMMERRGLNIQSIIDALQRNSTG 1034

Query: 1340 --------NCFREGRK------------LPRLFMTSQSCVLGNEQKNLEELCISVGAVES 1221
                    N   E RK            LP L + S+ C   ++++N    CI V    +
Sbjct: 1035 EQAKINLRNILNELRKKYKLSGKQVKIKLPNLMILSRDCTFIDQRENGRTFCIVVIVEIT 1094

Query: 1220 SERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPD-------GQL 1062
             +  +Q       LDT+RD V+P L +T+IKGF EFK VDILW+  P+         G+L
Sbjct: 1095 KDSSKQ-------LDTVRDLVVPFLSRTVIKGFLEFKSVDILWNDLPQSSKSHMFSSGEL 1147

Query: 1061 FLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSL 882
            +LK+ M E C   KFW +LQ+ACLP+MD+IDWERS PD +++I   +GI + + YFL SL
Sbjct: 1148 YLKVFMSEDCERTKFWSSLQNACLPVMDLIDWERSYPDNIYNIVCAYGIDAGWKYFLRSL 1207

Query: 881  KSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEK 702
            K A+SDIG+ + LEHLLLV++SLS TGEF GLSAKGIK+Q    S+SSPF QACFSNP  
Sbjct: 1208 KFALSDIGKTVLLEHLLLVANSLSFTGEFLGLSAKGIKRQMDQASVSSPFMQACFSNPGA 1267

Query: 701  CFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQK 522
            CFI+AAK  + D L G +D+V+WG++ P+GTGG F I+YSGK  +P +  NIY  L    
Sbjct: 1268 CFIKAAKEGAVDDLQGILDSVSWGKKVPIGTGGHFDILYSGKGFTPAKPTNIYSALC--- 1324

Query: 521  HDSSSQIPGADKWKAQPGVDNAGGSM-RRWNEHNCTTKKE---KNVVFSSQPASV--RIG 360
            H+S S          + G+ +A   +  +W + +    K+   K     + P+SV   I 
Sbjct: 1325 HESKSH-----GENVETGLTDACRKVCCKWEKQSFYASKDPLPKGDSSENLPSSVLRSIY 1379

Query: 359  SWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKD-------AXXXXXXXX 201
            S +++  ++SSL  +LH+YP+N  L+E DKS+L+ AL +HPK++                
Sbjct: 1380 SREDVLKLNSSLKHILHKYPINDYLSEVDKSILLRALYFHPKRNQKMGTGPKDIKVLPRI 1439

Query: 200  XXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPE 72
                HS  H +SRCF+L+R DGT EDFSYRKC++ A  +I P+
Sbjct: 1440 RVGYHSE-HQQSRCFMLVRTDGTIEDFSYRKCILGALEKICPQ 1481


>ref|XP_019055891.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Nelumbo nucifera]
          Length = 1494

 Score =  612 bits (1578), Expect = 0.0
 Identities = 342/703 (48%), Positives = 449/703 (63%), Gaps = 42/703 (5%)
 Frame = -2

Query: 2054 YAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGTVRN 1875
            YAV+E SFLDGL+PLECFVH++S R N F ENA+LPGTLTRK+MFYMRD+ +AYDGTVR 
Sbjct: 801  YAVVENSFLDGLNPLECFVHSVSTRDNSFGENADLPGTLTRKLMFYMRDLYIAYDGTVRT 860

Query: 1874 AYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYGALD 1695
            AYG QLVQFSYG  +  S +D        G  +A D +GG PVGSL+ACSISEAAY ALD
Sbjct: 861  AYGNQLVQFSYGCFKGDSVQD--PCGLFGGSPNAYDGVGGQPVGSLSACSISEAAYSALD 918

Query: 1694 HPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHLDRV 1515
             P++ LE SPLLNLKKVLEC     S ++TASL LS KL R   GFEYGA  VKNHL+RV
Sbjct: 919  QPISKLEISPLLNLKKVLECGQKNASADQTASLFLSKKLGRWICGFEYGATEVKNHLERV 978

Query: 1514 FFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGNY-- 1341
            FFSD+V++VM+ +S    +    M  SPWV HFHV KEM+ R+ +N+QSI+DAL  N   
Sbjct: 979  FFSDVVSTVMVIFSP---QRHSQMSASPWVCHFHVCKEMMERRGLNIQSIIDALQRNSTG 1035

Query: 1340 --------NCFREGRK------------LPRLFMTSQSCVLGNEQKNLEELCISVGAVES 1221
                    N   E RK            LP L + S+ C   ++++N    CI V    +
Sbjct: 1036 EQAKINLRNILNELRKKYKLSGKQVKIKLPNLMILSRDCTFIDQRENGRTFCIVVIVEIT 1095

Query: 1220 SERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPD-------GQL 1062
             +  +Q       LDT+RD V+P L +T+IKGF EFK VDILW+  P+         G+L
Sbjct: 1096 KDSSKQ-------LDTVRDLVVPFLSRTVIKGFLEFKSVDILWNDLPQSSKSHMFSSGEL 1148

Query: 1061 FLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSL 882
            +LK+ M E C   KFW +LQ+ACLP+MD+IDWERS PD +++I   +GI + + YFL SL
Sbjct: 1149 YLKVFMSEDCERTKFWSSLQNACLPVMDLIDWERSYPDNIYNIVCAYGIDAGWKYFLRSL 1208

Query: 881  KSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEK 702
            K A+SDIG+ + LEHLLLV++SLS TGEF GLSAKGIK+Q    S+SSPF QACFSNP  
Sbjct: 1209 KFALSDIGKTVLLEHLLLVANSLSFTGEFLGLSAKGIKRQMDQASVSSPFMQACFSNPGA 1268

Query: 701  CFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQK 522
            CFI+AAK  + D L G +D+V+WG++ P+GTGG F I+YSGK  +P +  NIY  L    
Sbjct: 1269 CFIKAAKEGAVDDLQGILDSVSWGKKVPIGTGGHFDILYSGKGFTPAKPTNIYSALC--- 1325

Query: 521  HDSSSQIPGADKWKAQPGVDNAGGSM-RRWNEHNCTTKKE---KNVVFSSQPASV--RIG 360
            H+S S          + G+ +A   +  +W + +    K+   K     + P+SV   I 
Sbjct: 1326 HESKSH-----GENVETGLTDACRKVCCKWEKQSFYASKDPLPKGDSSENLPSSVLRSIY 1380

Query: 359  SWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKD-------AXXXXXXXX 201
            S +++  ++SSL  +LH+YP+N  L+E DKS+L+ AL +HPK++                
Sbjct: 1381 SREDVLKLNSSLKHILHKYPINDYLSEVDKSILLRALYFHPKRNQKMGTGPKDIKVLPRI 1440

Query: 200  XXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPE 72
                HS  H +SRCF+L+R DGT EDFSYRKC++ A  +I P+
Sbjct: 1441 RVGYHSE-HQQSRCFMLVRTDGTIEDFSYRKCILGALEKICPQ 1482


>ref|XP_019055889.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nelumbo nucifera]
 ref|XP_019055890.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nelumbo nucifera]
          Length = 1495

 Score =  612 bits (1578), Expect = 0.0
 Identities = 342/703 (48%), Positives = 449/703 (63%), Gaps = 42/703 (5%)
 Frame = -2

Query: 2054 YAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGTVRN 1875
            YAV+E SFLDGL+PLECFVH++S R N F ENA+LPGTLTRK+MFYMRD+ +AYDGTVR 
Sbjct: 802  YAVVENSFLDGLNPLECFVHSVSTRDNSFGENADLPGTLTRKLMFYMRDLYIAYDGTVRT 861

Query: 1874 AYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYGALD 1695
            AYG QLVQFSYG  +  S +D        G  +A D +GG PVGSL+ACSISEAAY ALD
Sbjct: 862  AYGNQLVQFSYGCFKGDSVQD--PCGLFGGSPNAYDGVGGQPVGSLSACSISEAAYSALD 919

Query: 1694 HPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHLDRV 1515
             P++ LE SPLLNLKKVLEC     S ++TASL LS KL R   GFEYGA  VKNHL+RV
Sbjct: 920  QPISKLEISPLLNLKKVLECGQKNASADQTASLFLSKKLGRWICGFEYGATEVKNHLERV 979

Query: 1514 FFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGNY-- 1341
            FFSD+V++VM+ +S    +    M  SPWV HFHV KEM+ R+ +N+QSI+DAL  N   
Sbjct: 980  FFSDVVSTVMVIFSP---QRHSQMSASPWVCHFHVCKEMMERRGLNIQSIIDALQRNSTG 1036

Query: 1340 --------NCFREGRK------------LPRLFMTSQSCVLGNEQKNLEELCISVGAVES 1221
                    N   E RK            LP L + S+ C   ++++N    CI V    +
Sbjct: 1037 EQAKINLRNILNELRKKYKLSGKQVKIKLPNLMILSRDCTFIDQRENGRTFCIVVIVEIT 1096

Query: 1220 SERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPD-------GQL 1062
             +  +Q       LDT+RD V+P L +T+IKGF EFK VDILW+  P+         G+L
Sbjct: 1097 KDSSKQ-------LDTVRDLVVPFLSRTVIKGFLEFKSVDILWNDLPQSSKSHMFSSGEL 1149

Query: 1061 FLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSL 882
            +LK+ M E C   KFW +LQ+ACLP+MD+IDWERS PD +++I   +GI + + YFL SL
Sbjct: 1150 YLKVFMSEDCERTKFWSSLQNACLPVMDLIDWERSYPDNIYNIVCAYGIDAGWKYFLRSL 1209

Query: 881  KSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEK 702
            K A+SDIG+ + LEHLLLV++SLS TGEF GLSAKGIK+Q    S+SSPF QACFSNP  
Sbjct: 1210 KFALSDIGKTVLLEHLLLVANSLSFTGEFLGLSAKGIKRQMDQASVSSPFMQACFSNPGA 1269

Query: 701  CFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQK 522
            CFI+AAK  + D L G +D+V+WG++ P+GTGG F I+YSGK  +P +  NIY  L    
Sbjct: 1270 CFIKAAKEGAVDDLQGILDSVSWGKKVPIGTGGHFDILYSGKGFTPAKPTNIYSALC--- 1326

Query: 521  HDSSSQIPGADKWKAQPGVDNAGGSM-RRWNEHNCTTKKE---KNVVFSSQPASV--RIG 360
            H+S S          + G+ +A   +  +W + +    K+   K     + P+SV   I 
Sbjct: 1327 HESKSH-----GENVETGLTDACRKVCCKWEKQSFYASKDPLPKGDSSENLPSSVLRSIY 1381

Query: 359  SWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKD-------AXXXXXXXX 201
            S +++  ++SSL  +LH+YP+N  L+E DKS+L+ AL +HPK++                
Sbjct: 1382 SREDVLKLNSSLKHILHKYPINDYLSEVDKSILLRALYFHPKRNQKMGTGPKDIKVLPRI 1441

Query: 200  XXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPE 72
                HS  H +SRCF+L+R DGT EDFSYRKC++ A  +I P+
Sbjct: 1442 RVGYHSE-HQQSRCFMLVRTDGTIEDFSYRKCILGALEKICPQ 1483


>ref|XP_020084500.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Ananas comosus]
 ref|XP_020084501.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Ananas comosus]
          Length = 1545

 Score =  612 bits (1579), Expect = 0.0
 Identities = 344/694 (49%), Positives = 445/694 (64%), Gaps = 22/694 (3%)
 Frame = -2

Query: 2060 NSYAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGTV 1881
            N YAVI +SFL GL+PLECF+HA+S R+N F ENAE+PGTLTRK+ FY+RD+ VAYDGTV
Sbjct: 866  NFYAVIRSSFLQGLNPLECFLHAISGRANFFGENAEIPGTLTRKLSFYLRDLYVAYDGTV 925

Query: 1880 RNAYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGG--HPVGSLAACSISEAAY 1707
            R+AYGQQ+VQFSY   ++   ED  HS   I  D   ++  G   PVGS AA SISEAAY
Sbjct: 926  RSAYGQQIVQFSYDISDEIFHEDA-HSRI-ISNDHIVEKYNGLGAPVGSWAASSISEAAY 983

Query: 1706 GALDHPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNH 1527
            G L+HPVNSLE SPL+ LK++LEC   RT  +    L LS  L+R  YGFEYGAL VKNH
Sbjct: 984  GGLEHPVNSLEDSPLMKLKEILECGKRRTYGDHAGILVLSKGLQRYRYGFEYGALEVKNH 1043

Query: 1526 LDRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAG 1347
            L+   FS++V +VMI Y        +  ++SPW  HFH++KE + +KR+ VQ ++D L  
Sbjct: 1044 LEITLFSEMVNTVMILYECP----LQRRKISPWSTHFHISKETLKKKRLQVQRVIDKLME 1099

Query: 1346 NYNCFREGRK--LPRLFMTSQSCVLGNEQKNLEE-LCISVGAVESSERKEQDEPSPTLLD 1176
            NY+  RE     LP L +T ++C L +E   L++ +CI+V A        +   S T LD
Sbjct: 1100 NYSLMREKSAGVLPALCITKKNCPLLDEHDELDQTVCIAVAA--------EVLDSVTQLD 1151

Query: 1175 TIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPDG-QLFLKIIMEESCPPRKFWRTLQS 999
            TI+D V+ +LL TL+KGF   K V+I    Q +PD  +L LK+ M ESC   +FW TLQ 
Sbjct: 1152 TIKDVVILILLNTLVKGFLGIKHVEI----QCQPDSTELSLKVTMSESCSRGRFWSTLQD 1207

Query: 998  ACLPIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSD 819
            AC+PIMD+IDW  S P+ ++D   V+GI +++ YFL SLKSA S IGR+IH E L+ V+D
Sbjct: 1208 ACIPIMDLIDWNSSHPESIYDTFTVYGIDAAWKYFLKSLKSATSGIGRHIHQEQLVTVAD 1267

Query: 818  SLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAV 639
              SVTGEFHGLS KG+KQQR  LSISSPF+ ACFS+P   FI AAK  S D L G +DAV
Sbjct: 1268 CFSVTGEFHGLSTKGLKQQRNRLSISSPFSHACFSSPGNNFINAAKKGSVDELCGILDAV 1327

Query: 638  AWGQEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGA---------DK 486
            +WG+E PVGTGGPF+II+S KV   +++E+IY++L   K +                  K
Sbjct: 1328 SWGKEPPVGTGGPFEIIFSQKVPQLQKSESIYKVLHNLKVEEPKPESAVACRASNRSNSK 1387

Query: 485  WKAQ-PGVDNA-GGSMRRW--NEHNCTTKKE---KNVVFSSQPASVRIGSWDNISAMSSS 327
            W+   P   N   G   +W  N +   T+ E   K +   S+    ++GSW +I  M +S
Sbjct: 1388 WRLNIPTFANGHAGKKDKWKCNFNKGATQTEGRPKKLAVQSEFLMRKVGSWASIVDMCTS 1447

Query: 326  LSRMLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILI 147
            L  MLH+YP +  + E DKS LMEAL YHPK+D            GH P H  SRCFIL+
Sbjct: 1448 LRAMLHEYPYDGIVGEKDKSSLMEALKYHPKRDEKIGVGVQDIKIGHHPTHRCSRCFILV 1507

Query: 146  RNDGTTEDFSYRKCVIEAANQISPEFGLLVEKEL 45
            R DGT +DFSYRKCV+ AA  +S EFG +VEK+L
Sbjct: 1508 RKDGTMDDFSYRKCVVGAAKMLSTEFGSIVEKKL 1541


>gb|OAY84267.1| DNA-directed RNA polymerase IV subunit 1 [Ananas comosus]
          Length = 1556

 Score =  612 bits (1579), Expect = 0.0
 Identities = 344/694 (49%), Positives = 445/694 (64%), Gaps = 22/694 (3%)
 Frame = -2

Query: 2060 NSYAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGTV 1881
            N YAVI +SFL GL+PLECF+HA+S R+N F ENAE+PGTLTRK+ FY+RD+ VAYDGTV
Sbjct: 877  NFYAVIRSSFLQGLNPLECFLHAISGRANFFGENAEIPGTLTRKLSFYLRDLYVAYDGTV 936

Query: 1880 RNAYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGG--HPVGSLAACSISEAAY 1707
            R+AYGQQ+VQFSY   ++   ED  HS   I  D   ++  G   PVGS AA SISEAAY
Sbjct: 937  RSAYGQQIVQFSYDISDEIFHEDA-HSRI-ISNDHIVEKYNGLGAPVGSWAASSISEAAY 994

Query: 1706 GALDHPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNH 1527
            G L+HPVNSLE SPL+ LK++LEC   RT  +    L LS  L+R  YGFEYGAL VKNH
Sbjct: 995  GGLEHPVNSLEDSPLMKLKEILECGKRRTYGDHAGILVLSKGLQRYRYGFEYGALEVKNH 1054

Query: 1526 LDRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAG 1347
            L+   FS++V +VMI Y        +  ++SPW  HFH++KE + +KR+ VQ ++D L  
Sbjct: 1055 LEITLFSEMVNTVMILYECP----LQRRKISPWSTHFHISKETLKKKRLQVQRVIDKLME 1110

Query: 1346 NYNCFREGRK--LPRLFMTSQSCVLGNEQKNLEE-LCISVGAVESSERKEQDEPSPTLLD 1176
            NY+  RE     LP L +T ++C L +E   L++ +CI+V A        +   S T LD
Sbjct: 1111 NYSLMREKSAGVLPALCITKKNCPLLDEHDELDQTVCIAVAA--------EVLDSVTQLD 1162

Query: 1175 TIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPDG-QLFLKIIMEESCPPRKFWRTLQS 999
            TI+D V+ +LL TL+KGF   K V+I    Q +PD  +L LK+ M ESC   +FW TLQ 
Sbjct: 1163 TIKDVVILILLNTLVKGFLGIKHVEI----QCQPDSTELSLKVTMSESCSRGRFWSTLQD 1218

Query: 998  ACLPIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSD 819
            AC+PIMD+IDW  S P+ ++D   V+GI +++ YFL SLKSA S IGR+IH E L+ V+D
Sbjct: 1219 ACIPIMDLIDWNSSHPESIYDTFTVYGIDAAWKYFLKSLKSATSGIGRHIHQEQLVTVAD 1278

Query: 818  SLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAV 639
              SVTGEFHGLS KG+KQQR  LSISSPF+ ACFS+P   FI AAK  S D L G +DAV
Sbjct: 1279 CFSVTGEFHGLSTKGLKQQRNRLSISSPFSHACFSSPGNNFINAAKKGSVDELCGILDAV 1338

Query: 638  AWGQEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGA---------DK 486
            +WG+E PVGTGGPF+II+S KV   +++E+IY++L   K +                  K
Sbjct: 1339 SWGKEPPVGTGGPFEIIFSQKVPQLQKSESIYKVLHNLKVEEPKPESAVACRASNRSNSK 1398

Query: 485  WKAQ-PGVDNA-GGSMRRW--NEHNCTTKKE---KNVVFSSQPASVRIGSWDNISAMSSS 327
            W+   P   N   G   +W  N +   T+ E   K +   S+    ++GSW +I  M +S
Sbjct: 1399 WRLNIPTFANGHAGKKDKWKCNFNKGATQTEGRPKKLAVQSEFLMRKVGSWASIVDMCTS 1458

Query: 326  LSRMLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILI 147
            L  MLH+YP +  + E DKS LMEAL YHPK+D            GH P H  SRCFIL+
Sbjct: 1459 LRAMLHEYPYDGIVGEKDKSSLMEALKYHPKRDEKIGVGVQDIKIGHHPTHRCSRCFILV 1518

Query: 146  RNDGTTEDFSYRKCVIEAANQISPEFGLLVEKEL 45
            R DGT +DFSYRKCV+ AA  +S EFG +VEK+L
Sbjct: 1519 RKDGTMDDFSYRKCVVGAAKMLSTEFGSIVEKKL 1552


>ref|XP_021318621.1| DNA-directed RNA polymerase IV subunit 1 isoform X3 [Sorghum bicolor]
          Length = 1171

 Score =  592 bits (1526), Expect = 0.0
 Identities = 312/673 (46%), Positives = 427/673 (63%), Gaps = 2/673 (0%)
 Frame = -2

Query: 2063 ENSYAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGT 1884
            +N YAVI  SF++GL+PLEC +HA+S R+N FSENA++PGTLTRK+M+++RDI VAYDGT
Sbjct: 530  QNLYAVIRNSFIEGLNPLECLLHAISGRANFFSENADVPGTLTRKLMYHLRDIHVAYDGT 589

Query: 1883 VRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYG 1704
            VR++YGQQ+VQFSY S                  D   D+LG  PVG  AACSISEAAYG
Sbjct: 590  VRSSYGQQIVQFSYDSA-----------------DDPVDKLGA-PVGCWAACSISEAAYG 631

Query: 1703 ALDHPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHL 1524
            AL+HPVN LE SPL+NL++V +C     S +    L LS  LK+  YG EY +L VKNHL
Sbjct: 632  ALEHPVNGLEDSPLMNLQEVFKCHKATNSGDHIGLLFLSRHLKKYRYGLEYASLEVKNHL 691

Query: 1523 DRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGN 1344
            ++V FSD+V ++MI Y  HD    +G     W  HFH++KEM+ +KR+ ++ +++ L   
Sbjct: 692  EQVNFSDLVETIMIIYDGHDKIRKEGT----WTTHFHISKEMMKKKRLGLRFVIEELTKE 747

Query: 1343 YNCFREGRK--LPRLFMTSQSCVLGNEQKNLEELCISVGAVESSERKEQDEPSPTLLDTI 1170
            YN  R+  K  +P + ++ + CV+G+E   +   CI+V A+       Q       LDTI
Sbjct: 748  YNATRDQLKNAIPSICISRRKCVVGDEGVKISACCIAVVALAEPNSMSQ-------LDTI 800

Query: 1169 RDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACL 990
            +  V+P++L TL+KGF EFK V+I    Q + DG+L +K+ M   C   +FW TLQ+AC+
Sbjct: 801  KKRVIPIILDTLLKGFLEFKDVEI----QCQHDGELLVKVCMSHHCKGGRFWATLQNACI 856

Query: 989  PIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLS 810
            P+M++IDWE SRP  V DI   +GI S++ YF+ SLKSA +DIGRNI  EHLL+++DS+S
Sbjct: 857  PVMELIDWELSRPSNVADIFCSYGIDSAWKYFVESLKSATTDIGRNIRREHLLVIADSMS 916

Query: 809  VTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWG 630
            VTG+FH +S+ G+KQQR  LSISSPF++ACFS P + FI+AAK  S D+L G++DA+AWG
Sbjct: 917  VTGQFHAISSHGLKQQRTRLSISSPFSEACFSRPAQSFIDAAKQCSVDNLCGSLDAIAWG 976

Query: 629  QEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNAGG 450
            +E   GT GPF+I++SGK H P+Q E+IY+ L   K      +        +   +NA  
Sbjct: 977  KEPFNGTSGPFEIMHSGKPHEPEQDESIYDFLRSPK---VQNVEKNHLDTRRQSTENASI 1033

Query: 449  SMRRWNEHNCTTKKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADK 270
                       T     +         ++  WDNI  M +SL  ML +YP+N  + E DK
Sbjct: 1034 CRLACKSKGSATVNGVAITSDQDFLHAKVSIWDNIIDMRASLQNMLREYPLNGYVMEPDK 1093

Query: 269  SLLMEALMYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAA 90
            S L+EAL +HP+              G +P HP +RCFIL+RND TTEDFSY KCV  AA
Sbjct: 1094 SKLIEALKFHPRGAEKIGVGVREIKVGLNPNHPGTRCFILLRNDDTTEDFSYHKCVHGAA 1153

Query: 89   NQISPEFGLLVEK 51
            N ISP+ G  ++K
Sbjct: 1154 NSISPQLGSYLKK 1166


>ref|XP_020165521.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Aegilops
            tauschii subsp. tauschii]
 ref|XP_020165522.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Aegilops
            tauschii subsp. tauschii]
 ref|XP_020165523.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Aegilops
            tauschii subsp. tauschii]
          Length = 1425

 Score =  597 bits (1538), Expect = 0.0
 Identities = 327/677 (48%), Positives = 440/677 (64%), Gaps = 1/677 (0%)
 Frame = -2

Query: 2063 ENSYAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGT 1884
            +N YAVI  SF  GL+PLEC +H++S R+N FSENA++PGTLTRK+M+++RD+ VAYDGT
Sbjct: 798  QNLYAVIRNSFAGGLNPLECLLHSISGRANFFSENADVPGTLTRKLMYHLRDLYVAYDGT 857

Query: 1883 VRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYG 1704
            VR++YGQQ++QF+Y + E   C D +      GE  A       PVGS AACSISEAAYG
Sbjct: 858  VRSSYGQQIMQFTYDTAEDM-CSDRNVE----GELGA-------PVGSWAACSISEAAYG 905

Query: 1703 ALDHPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHL 1524
            ALDHPVNSLE SPL+NL+ VL+C    TS++    L LS  LK+  YG EY +L VK+HL
Sbjct: 906  ALDHPVNSLEESPLMNLQDVLKCQKGGTSMDHVGLLFLSKNLKKYRYGLEYASLEVKDHL 965

Query: 1523 DRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGN 1344
            + V FSD+V +VMI Y     + TKG   SPW+ HFH+++EM+ +KR+ +  +V+ L   
Sbjct: 966  EPVNFSDLVDTVMILYGGCGIESTKG---SPWITHFHLSQEMMTKKRLGLTLVVEELTEQ 1022

Query: 1343 YNCFREGRKLPRLFMTSQSCVLGNEQKNLEELCISVGAVESSERKEQDEPSPTLLDTIRD 1164
            YN  R+    P+++++   C   +E  N +  CI+V   + S    Q       LDTI+ 
Sbjct: 1023 YNAKRDKLNFPKVYISKGKCSADHECGNRQTCCITVVTQDDSNSMSQ-------LDTIKK 1075

Query: 1163 SVMPVLLQTLIKGFKEFKQVDILWDSQPKPDGQLFLKIIM-EESCPPRKFWRTLQSACLP 987
             V+P LL  L+KGF EFK+V+I    Q + D +L +K++M EE C   KFW TLQ +C+ 
Sbjct: 1076 RVIPNLLALLVKGFLEFKKVEI----QCQEDSELVVKVVMSEEHCKSVKFWATLQKSCIA 1131

Query: 986  IMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSV 807
            IM++IDWERSRP  V+DI   +GI S++ YF+ SL+S   DIGRNI  EHLL+V++ LSV
Sbjct: 1132 IMELIDWERSRPGSVYDIFCSYGIDSAWKYFVESLRSKTDDIGRNIRREHLLVVANCLSV 1191

Query: 806  TGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQ 627
            +G+FHGLS++G+KQQR  LSISSPF++ACFS P   FI AAK SS D+L GTVDA+AWG+
Sbjct: 1192 SGQFHGLSSQGLKQQRTRLSISSPFSEACFSRPAHTFINAAKQSSVDNLCGTVDAMAWGK 1251

Query: 626  EAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNAGGS 447
            E   GT GPFKIIYSGK H+P   ENIY+ L      +S ++     W+A PG     GS
Sbjct: 1252 EPSTGTSGPFKIIYSGKAHAPIPNENIYDFL------NSPEV-----WQA-PGEAFLNGS 1299

Query: 446  MRRWNEHNCTTKKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKS 267
                     T   E++ + ++      +G WDNI  M + L  ML +Y +N  + E DKS
Sbjct: 1300 ---------TISVEQDFLVAT------VGIWDNIIDMRTCLQNMLREYQLNECVVELDKS 1344

Query: 266  LLMEALMYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAAN 87
             ++EAL +HP+              GH P HP +RCFI++R+DGTTEDFSY+KCV  AA+
Sbjct: 1345 RVIEALRFHPRGREKIGAGIKDIKIGHHPSHPGTRCFIMVRDDGTTEDFSYKKCVQAAAD 1404

Query: 86   QISPEFGLLVEKELDSR 36
             ISPE G  VE+ L +R
Sbjct: 1405 SISPELGRYVERILRNR 1421


>ref|XP_020165520.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Aegilops
            tauschii subsp. tauschii]
          Length = 1431

 Score =  597 bits (1538), Expect = 0.0
 Identities = 327/677 (48%), Positives = 440/677 (64%), Gaps = 1/677 (0%)
 Frame = -2

Query: 2063 ENSYAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGT 1884
            +N YAVI  SF  GL+PLEC +H++S R+N FSENA++PGTLTRK+M+++RD+ VAYDGT
Sbjct: 804  QNLYAVIRNSFAGGLNPLECLLHSISGRANFFSENADVPGTLTRKLMYHLRDLYVAYDGT 863

Query: 1883 VRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYG 1704
            VR++YGQQ++QF+Y + E   C D +      GE  A       PVGS AACSISEAAYG
Sbjct: 864  VRSSYGQQIMQFTYDTAEDM-CSDRNVE----GELGA-------PVGSWAACSISEAAYG 911

Query: 1703 ALDHPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHL 1524
            ALDHPVNSLE SPL+NL+ VL+C    TS++    L LS  LK+  YG EY +L VK+HL
Sbjct: 912  ALDHPVNSLEESPLMNLQDVLKCQKGGTSMDHVGLLFLSKNLKKYRYGLEYASLEVKDHL 971

Query: 1523 DRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGN 1344
            + V FSD+V +VMI Y     + TKG   SPW+ HFH+++EM+ +KR+ +  +V+ L   
Sbjct: 972  EPVNFSDLVDTVMILYGGCGIESTKG---SPWITHFHLSQEMMTKKRLGLTLVVEELTEQ 1028

Query: 1343 YNCFREGRKLPRLFMTSQSCVLGNEQKNLEELCISVGAVESSERKEQDEPSPTLLDTIRD 1164
            YN  R+    P+++++   C   +E  N +  CI+V   + S    Q       LDTI+ 
Sbjct: 1029 YNAKRDKLNFPKVYISKGKCSADHECGNRQTCCITVVTQDDSNSMSQ-------LDTIKK 1081

Query: 1163 SVMPVLLQTLIKGFKEFKQVDILWDSQPKPDGQLFLKIIM-EESCPPRKFWRTLQSACLP 987
             V+P LL  L+KGF EFK+V+I    Q + D +L +K++M EE C   KFW TLQ +C+ 
Sbjct: 1082 RVIPNLLALLVKGFLEFKKVEI----QCQEDSELVVKVVMSEEHCKSVKFWATLQKSCIA 1137

Query: 986  IMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSV 807
            IM++IDWERSRP  V+DI   +GI S++ YF+ SL+S   DIGRNI  EHLL+V++ LSV
Sbjct: 1138 IMELIDWERSRPGSVYDIFCSYGIDSAWKYFVESLRSKTDDIGRNIRREHLLVVANCLSV 1197

Query: 806  TGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQ 627
            +G+FHGLS++G+KQQR  LSISSPF++ACFS P   FI AAK SS D+L GTVDA+AWG+
Sbjct: 1198 SGQFHGLSSQGLKQQRTRLSISSPFSEACFSRPAHTFINAAKQSSVDNLCGTVDAMAWGK 1257

Query: 626  EAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNAGGS 447
            E   GT GPFKIIYSGK H+P   ENIY+ L      +S ++     W+A PG     GS
Sbjct: 1258 EPSTGTSGPFKIIYSGKAHAPIPNENIYDFL------NSPEV-----WQA-PGEAFLNGS 1305

Query: 446  MRRWNEHNCTTKKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKS 267
                     T   E++ + ++      +G WDNI  M + L  ML +Y +N  + E DKS
Sbjct: 1306 ---------TISVEQDFLVAT------VGIWDNIIDMRTCLQNMLREYQLNECVVELDKS 1350

Query: 266  LLMEALMYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAAN 87
             ++EAL +HP+              GH P HP +RCFI++R+DGTTEDFSY+KCV  AA+
Sbjct: 1351 RVIEALRFHPRGREKIGAGIKDIKIGHHPSHPGTRCFIMVRDDGTTEDFSYKKCVQAAAD 1410

Query: 86   QISPEFGLLVEKELDSR 36
             ISPE G  VE+ L +R
Sbjct: 1411 SISPELGRYVERILRNR 1427


>ref|XP_020572389.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Phalaenopsis
            equestris]
          Length = 1418

 Score =  595 bits (1535), Expect = 0.0
 Identities = 329/685 (48%), Positives = 451/685 (65%), Gaps = 9/685 (1%)
 Frame = -2

Query: 2063 ENSYAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGT 1884
            +  +AVI++S LDGL+PLECF HALS R+N+FSENA+LPGTL+RK+MFYMRD+ VAYDG+
Sbjct: 754  QKHFAVIKSSLLDGLNPLECFFHALSGRANLFSENAQLPGTLSRKLMFYMRDLYVAYDGS 813

Query: 1883 VRNAYGQQLVQFSYGSPEK-KSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAY 1707
            VRN YG+++VQF Y  PE  K C+       S          GG PVGS+A+CS+SE AY
Sbjct: 814  VRNVYGEEIVQFCYNFPENGKFCKISSEREVSRSVP------GGQPVGSMASCSLSETAY 867

Query: 1706 GALDHPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNH 1527
            GAL+ PVN    SPLLN K +LE +    S   TASL LSNKL+RL YGFE+ AL VK+ 
Sbjct: 868  GALECPVNPFCPSPLLNFKALLERSTGTISGVHTASLFLSNKLRRLRYGFEHAALVVKSQ 927

Query: 1526 LDRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAG 1347
            L  V F++IV ++ I Y+  D   T+ + LSPWV+HF+V+KE +  +R+  Q++ D L  
Sbjct: 928  LGHVLFAEIVRTITILYARKD---TQRVGLSPWVIHFYVDKESMSSRRLEAQNVKDQLVR 984

Query: 1346 NYNCFRE-GRKLPRLFMTSQSCVLGNEQKNLEEL-CISVGAVESSERKEQDEPSPTLLDT 1173
            +Y         LP+LF+ S+  +  ++Q+    + CI++ AVE ++       SP LLDT
Sbjct: 985  SYEKKAALNDSLPKLFIESKYHLPDDKQEKSGAMNCITL-AVEFAD-------SPILLDT 1036

Query: 1172 IRDSVMPVLLQTLIKGFKEFKQVDILWD-SQPKPDGQLFLKIIMEESCPPRKFWRTLQSA 996
            +R  V+P LL++LIKGF EF++VDILWD +Q   +G+LFLK+ M E+C P KFW ++Q+A
Sbjct: 1037 LRHLVLPCLLKSLIKGFSEFEKVDILWDDTQKNSNGELFLKVTMSETCSPGKFWNSIQNA 1096

Query: 995  CLPIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDS 816
            C+PIMD+IDW RS P+ + +IS +FGI +++  FL SLKS   D+GRN+  EHL +V+D 
Sbjct: 1097 CVPIMDLIDWNRSHPNDICNISSMFGISAAWIIFLRSLKSTALDVGRNVRQEHLKIVADR 1156

Query: 815  LSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVA 636
            L  +GEF+GLS KG+K Q+   + SSPFT ACFSNP  CF++AAK   TD L+GT+DA++
Sbjct: 1157 LFFSGEFYGLSKKGLKMQKDFTANSSPFTFACFSNPASCFVDAAKQDCTDSLHGTIDAIS 1216

Query: 635  WGQEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNA 456
            WG+E+P+GTGGPFKI+YSGKV +PK+   IY +L  Q           DK   +P   +A
Sbjct: 1217 WGKESPIGTGGPFKIMYSGKVSNPKEGVGIYSMLQCQDI--------IDKRMEEP--LHA 1266

Query: 455  GGSM---RRWNEHNCTTKKEKNVVFSSQP--ASVRIGSWDNISAMSSSLSRMLHQYPVNH 291
            G  +   ++W+E NC T+ E +  F+ Q    + + GS+ +I  M  SL  +L +YP+N 
Sbjct: 1267 GDDICKSKKWDE-NCCTEYEGHTDFAFQKGLGARQNGSYSHIVNMEFSLRAILLKYPINR 1325

Query: 290  QLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYR 111
             +  AD+ +LM+AL  HP  DA           G+S  H  S+CFIL+R DGTTEDFSY 
Sbjct: 1326 YVTAADREILMKALARHPSCDAKIGSGVQDIMVGYSSEHKGSKCFILVRKDGTTEDFSYH 1385

Query: 110  KCVIEAANQISPEFGLLVEKELDSR 36
            KCV  AA QISPE   + EK    R
Sbjct: 1386 KCVAGAAAQISPECAAMFEKRYHRR 1410


>ref|XP_015637043.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X6 [Oryza
            sativa Japonica Group]
          Length = 1251

 Score =  590 bits (1521), Expect = 0.0
 Identities = 315/679 (46%), Positives = 435/679 (64%), Gaps = 3/679 (0%)
 Frame = -2

Query: 2063 ENSYAVIEASFLDGLSPLECFVHALSCRSNMFSENAELPGTLTRKIMFYMRDISVAYDGT 1884
            ++ YAV+  SFLDGL+PLEC +HA+S R+N FSENA++PGTLTRK+M+++RD  VAYDGT
Sbjct: 596  QDMYAVVRNSFLDGLNPLECLLHAISGRANFFSENADVPGTLTRKLMYHLRDTYVAYDGT 655

Query: 1883 VRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSIGEDSACDRLGGHPVGSLAACSISEAAYG 1704
            VR++YGQQ+V+FSY + +    +     H   GE  A       PVGS AACSISEAAYG
Sbjct: 656  VRSSYGQQIVRFSYDTADGMYSD-----HDLEGEPGA-------PVGSWAACSISEAAYG 703

Query: 1703 ALDHPVNSLESSPLLNLKKVLECAPTRTSVNRTASLALSNKLKRLNYGFEYGALAVKNHL 1524
            ALDHPVNSLE SPL+NL++VL+C     S++ T  L LS  L++  YGFEY +L VK+HL
Sbjct: 704  ALDHPVNSLEDSPLMNLQEVLKCHKGTNSLDHTGLLFLSKHLRKYRYGFEYASLEVKDHL 763

Query: 1523 DRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPWVLHFHVNKEMILRKRINVQSIVDALAGN 1344
            +RV FSD+V +V+I Y   D + TKG   +PW+ HFH+N+E +  KR+ ++ IV  +   
Sbjct: 764  ERVDFSDMVDTVIILYGGSDMQKTKG---NPWITHFHLNQETMKIKRLGLEFIVREIIDQ 820

Query: 1343 YNCFRE--GRKLPRLFMTSQSCVLGNEQKNLEELCISVGAVESSERKEQDEPSPTLLDTI 1170
            YN  R+     +P + +++  C +GNE    +  C+++         + +  S + LD I
Sbjct: 821  YNTLRKQLNNAIPSVSISNSKCSVGNECVKNQTCCVTMVV-------QVEINSMSQLDVI 873

Query: 1169 RDSVMPVLLQTLIKGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACL 990
            ++ V+P +L TL+KGF EFK V +    Q + D +L LK+ M E C   KFW TLQ+AC+
Sbjct: 874  KERVIPSILATLLKGFLEFKNVKV----QCQEDNELVLKVGMSEHCKSGKFWATLQNACI 929

Query: 989  PIMDMIDWERSRPDGVHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLS 810
            PIM++IDWERSRP+ V+D    +GI S++ +F+ SL+S    IGRNIH +HLL+V+D LS
Sbjct: 930  PIMELIDWERSRPERVYDNFCSYGIDSAWKFFVESLRSTTDAIGRNIHRQHLLVVADCLS 989

Query: 809  VTGEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWG 630
            V+G+FHGLS++G+KQQR  LSISSPF++ACFS P   FI AAK  S D+L GT+DA+AWG
Sbjct: 990  VSGQFHGLSSQGLKQQRTWLSISSPFSEACFSRPAHSFINAAKRDSVDNLSGTLDAIAWG 1049

Query: 629  QEAPVGTGGPFKIIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKA-QPGVDNAG 453
            +E   G+ GPFKI+YSGK H  KQ E+IY+ L    H+   Q    +     +   +   
Sbjct: 1050 KEPCAGSSGPFKILYSGKSHETKQNEHIYDFL----HNPEVQALEKNVMDTYRKRTEKTS 1105

Query: 452  GSMRRWNEHNCTTKKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEAD 273
                  N     T     + F+ +  + ++G W+NI  M +SL  ML +Y +N  + E D
Sbjct: 1106 KRRSALNSEGNATINGGAISFNQKFLNAKVGIWENIIDMRTSLQNMLREYTLNEVVTEQD 1165

Query: 272  KSLLMEALMYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEA 93
            KS LMEAL +HP+              G +P HP SRCFI++RND TT DFSY KCV+ A
Sbjct: 1166 KSCLMEALKFHPRGYDKIGVGIREIKIGVNPGHPSSRCFIVLRNDDTTADFSYNKCVLGA 1225

Query: 92   ANQISPEFGLLVEKELDSR 36
            AN ISPE G  +E    +R
Sbjct: 1226 ANSISPELGSYIENRRSNR 1244