BLASTX nr result

ID: Ophiopogon24_contig00016228 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00016228
         (544 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020265529.1| zinc finger CCCH domain-containing protein 3...    81   1e-14
ref|XP_020265528.1| zinc finger CCCH domain-containing protein 3...    81   1e-14
ref|XP_020265527.1| zinc finger CCCH domain-containing protein 3...    81   1e-14

>ref|XP_020265529.1| zinc finger CCCH domain-containing protein 33-like isoform X3
           [Asparagus officinalis]
          Length = 436

 Score = 81.3 bits (199), Expect = 1e-14
 Identities = 39/74 (52%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
 Frame = +1

Query: 1   MGYYNYAVPTLSVPDPSAFFPPNQRNLPQVTWTSATETS----LKLPDRIKRSDXXXXXX 168
           MG+YNYA+PT SVPDPSA FPPN  N PQVTW SA+E S    L+LPDR+++SD      
Sbjct: 335 MGFYNYAMPTYSVPDPSALFPPNHSNSPQVTWASASEASFSKTLRLPDRLQKSDEKNNKE 394

Query: 169 XXXXXXXXXDHIND 210
                    D +ND
Sbjct: 395 ANATSHDNNDRVND 408


>ref|XP_020265528.1| zinc finger CCCH domain-containing protein 3-like isoform X2
           [Asparagus officinalis]
          Length = 438

 Score = 81.3 bits (199), Expect = 1e-14
 Identities = 39/74 (52%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
 Frame = +1

Query: 1   MGYYNYAVPTLSVPDPSAFFPPNQRNLPQVTWTSATETS----LKLPDRIKRSDXXXXXX 168
           MG+YNYA+PT SVPDPSA FPPN  N PQVTW SA+E S    L+LPDR+++SD      
Sbjct: 337 MGFYNYAMPTYSVPDPSALFPPNHSNSPQVTWASASEASFSKTLRLPDRLQKSDEKNNKE 396

Query: 169 XXXXXXXXXDHIND 210
                    D +ND
Sbjct: 397 ANATSHDNNDRVND 410


>ref|XP_020265527.1| zinc finger CCCH domain-containing protein 33-like isoform X1
           [Asparagus officinalis]
 gb|ONK70266.1| uncharacterized protein A4U43_C05F31960 [Asparagus officinalis]
          Length = 454

 Score = 81.3 bits (199), Expect = 1e-14
 Identities = 39/74 (52%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
 Frame = +1

Query: 1   MGYYNYAVPTLSVPDPSAFFPPNQRNLPQVTWTSATETS----LKLPDRIKRSDXXXXXX 168
           MG+YNYA+PT SVPDPSA FPPN  N PQVTW SA+E S    L+LPDR+++SD      
Sbjct: 353 MGFYNYAMPTYSVPDPSALFPPNHSNSPQVTWASASEASFSKTLRLPDRLQKSDEKNNKE 412

Query: 169 XXXXXXXXXDHIND 210
                    D +ND
Sbjct: 413 ANATSHDNNDRVND 426


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