BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00016211
         (1902 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX94027.1| hypothetical chloroplast RF19 (chloroplast) [Dasy...  1083   0.0  
ref|YP_009431276.1| hypothetical chloroplast RF19 (chloroplast) ...  1083   0.0  
ref|YP_009335390.1| hypothetical chloroplast RF19 (chloroplast) ...  1080   0.0  
ref|YP_009432360.1| hypothetical protein ycf1 (chloroplast) [Pol...  1066   0.0  
gb|AEX94029.1| hypothetical chloroplast RF19 (chloroplast) [Liri...  1056   0.0  
gb|AEX94026.1| hypothetical chloroplast RF19 (chloroplast) [Beau...  1037   0.0  
gb|AEX94033.1| hypothetical chloroplast RF19 (chloroplast) [Maia...  1020   0.0  
gb|AEX94031.1| hypothetical chloroplast RF19 (chloroplast) [Rusc...   967   0.0  
gb|AEX94032.1| hypothetical chloroplast RF19 (chloroplast) [Sans...   960   0.0  
gb|AEX94009.1| hypothetical chloroplast RF19 (chloroplast) [Aspa...   928   0.0  
ref|YP_009431190.1| hypothetical protein ycf1 (chloroplast) [Asp...   922   0.0  
emb|CUS18688.1| hypothetical protein ycf1 (plastid) [Asparagus o...   918   0.0  
gb|AEX94008.1| hypothetical chloroplast RF19 (chloroplast) [Aspa...   918   0.0  
ref|YP_009432446.1| hypothetical protein ycf1 (chloroplast) [Xan...   896   0.0  
gb|AEX94028.1| hypothetical chloroplast RF19 (chloroplast) [Erio...   881   0.0  
ref|YP_009334548.1| hypothetical chloroplast RF19 (chloroplast) ...   880   0.0  
gb|AEX94034.1| hypothetical chloroplast RF19 (chloroplast) [Andr...   880   0.0  
gb|AEX94015.1| hypothetical chloroplast RF19 (chloroplast) [Dory...   880   0.0  
ref|YP_009432531.1| hypothetical protein ycf1 (chloroplast) [Bar...   874   0.0  
ref|YP_009432783.1| hypothetical protein ycf1 (chloroplast) [Mil...   874   0.0  

>gb|AEX94027.1| hypothetical chloroplast RF19 (chloroplast) [Dasylirion wheeleri]
          Length = 1801

 Score = 1083 bits (2801), Expect = 0.0
 Identities = 542/603 (89%), Positives = 553/603 (91%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESK+DI
Sbjct: 981  TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKKDI 1040

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            WQIFKRKNIRVIRKSHYFMK FVEKIYMDILL IIKIPRINAQLFFESTKKIINKSISNA
Sbjct: 1041 WQIFKRKNIRVIRKSHYFMKSFVEKIYMDILLCIIKIPRINAQLFFESTKKIINKSISNA 1100

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETNQEGIEKTN+NTMNFISTIKNPFSN               CDLSSLSQAYVFYKLSQN
Sbjct: 1101 ETNQEGIEKTNKNTMNFISTIKNPFSN---------------CDLSSLSQAYVFYKLSQN 1145

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QLLNKY+LKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY
Sbjct: 1146 QLLNKYHLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1205

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1002
            QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI
Sbjct: 1206 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1265

Query: 1001 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESFYR 822
            SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGST  LQVEDKKIPYNFNTNT KSESFYR
Sbjct: 1266 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGST--LQVEDKKIPYNFNTNTLKSESFYR 1323

Query: 821  LISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHKNA 642
            LISI ISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTK  IHKNA
Sbjct: 1324 LISISISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTK--IHKNA 1381

Query: 641  KTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPEFV 462
            KTETQNSQKFEKKDPFSFTIHHKINPSNQKK FFDWIGMNQERLYHTISNLEPWFFPEFV
Sbjct: 1382 KTETQNSQKFEKKDPFSFTIHHKINPSNQKKYFFDWIGMNQERLYHTISNLEPWFFPEFV 1441

Query: 461  LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENSXX 282
            LLFDVYKINPWIIPIKLLIF F FYEKNISQNEKI+VNKKKNLSILANQKEYLELENS  
Sbjct: 1442 LLFDVYKINPWIIPIKLLIFDFSFYEKNISQNEKIDVNKKKNLSILANQKEYLELENSNQ 1501

Query: 281  XXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEKIFSF 102
                    GDFVSDL KQNKKKNLEED TGADIKKGRKKK  + ++ +   F  +K F F
Sbjct: 1502 KKNKQQGQGDFVSDLGKQNKKKNLEEDYTGADIKKGRKKKQFKSKKEAELNFFLKKYFLF 1561

Query: 101  SIK 93
             ++
Sbjct: 1562 QLR 1564



 Score = 92.0 bits (227), Expect = 2e-15
 Identities = 45/62 (72%), Positives = 52/62 (83%)
 Frame = -3

Query: 229  KTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 50
            + K+K L++      +KK  +KKQFKSKKEAEL+FFLKKYFLFQLRWDDSLNQRMINNIK
Sbjct: 1519 QNKKKNLEEDYTGADIKKGRKKKQFKSKKEAELNFFLKKYFLFQLRWDDSLNQRMINNIK 1578

Query: 49   VY 44
            VY
Sbjct: 1579 VY 1580


>ref|YP_009431276.1| hypothetical chloroplast RF19 (chloroplast) [Maianthemum bicolor]
 gb|ASW26713.1| hypothetical chloroplast RF19 (chloroplast) [Maianthemum bicolor]
          Length = 1815

 Score = 1083 bits (2800), Expect = 0.0
 Identities = 538/603 (89%), Positives = 555/603 (92%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            TIRIRSANCVN NYSLIETKMKDLANKTITIRTQIEGITKGKKK VRACDDKRSESK+DI
Sbjct: 982  TIRIRSANCVNANYSLIETKMKDLANKTITIRTQIEGITKGKKKRVRACDDKRSESKKDI 1041

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            WQIFKRKNIRVIRKSHYFMK FVEKIYMDILL IIKIPRINAQLFFESTKKIINKSISNA
Sbjct: 1042 WQIFKRKNIRVIRKSHYFMKSFVEKIYMDILLCIIKIPRINAQLFFESTKKIINKSISNA 1101

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETN+EGIEKTNQNTMNFISTIKNPFS+F             NCDLSSLSQAYVFYKLSQN
Sbjct: 1102 ETNKEGIEKTNQNTMNFISTIKNPFSHFSNTNISKKNIRNNNCDLSSLSQAYVFYKLSQN 1161

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QLLNKY+LKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKK+HKSGMNKWKNWLRGHY
Sbjct: 1162 QLLNKYHLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKMHKSGMNKWKNWLRGHY 1221

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1002
            QYNLSQTKW HLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI
Sbjct: 1222 QYNLSQTKWAHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1281

Query: 1001 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESFYR 822
            SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGST  LQVEDKKIPYNFNTNT KSESFYR
Sbjct: 1282 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGST--LQVEDKKIPYNFNTNTLKSESFYR 1339

Query: 821  LISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHKNA 642
            LISI ISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTK  IHKNA
Sbjct: 1340 LISISISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTK--IHKNA 1397

Query: 641  KTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPEFV 462
            KTET+N++KFEKKDPFSFTIHHKINPSNQKK FFDWIGMNQERLYHTISNLEPWFFPEFV
Sbjct: 1398 KTETKNAKKFEKKDPFSFTIHHKINPSNQKKYFFDWIGMNQERLYHTISNLEPWFFPEFV 1457

Query: 461  LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENSXX 282
            LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKI+VNKKKNLSILANQKEYLELENS  
Sbjct: 1458 LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKIDVNKKKNLSILANQKEYLELENSNQ 1517

Query: 281  XXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEKIFSF 102
                    GDFVSDLRKQNK KNLEED TGADIKKGRKKK ++ ++ +   F  +K F F
Sbjct: 1518 KKNKQQGQGDFVSDLRKQNKNKNLEEDYTGADIKKGRKKKQLKSKKEAELDFFLKKYFLF 1577

Query: 101  SIK 93
             ++
Sbjct: 1578 QLR 1580



 Score = 90.9 bits (224), Expect = 5e-15
 Identities = 45/62 (72%), Positives = 50/62 (80%)
 Frame = -3

Query: 229  KTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 50
            + K K L++      +KK  +KKQ KSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK
Sbjct: 1535 QNKNKNLEEDYTGADIKKGRKKKQLKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 1594

Query: 49   VY 44
            VY
Sbjct: 1595 VY 1596


>ref|YP_009335390.1| hypothetical chloroplast RF19 (chloroplast) [Nolina atopocarpa]
 gb|APO12448.1| hypothetical chloroplast RF19 (chloroplast) [Nolina atopocarpa]
          Length = 1813

 Score = 1080 bits (2794), Expect = 0.0
 Identities = 540/600 (90%), Positives = 549/600 (91%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESK+DI
Sbjct: 978  TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKKDI 1037

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            WQIFKRKNIRVIRKSHYFMK FVEKIYMDILL IIKIPRINAQLFFESTKKIINKSISNA
Sbjct: 1038 WQIFKRKNIRVIRKSHYFMKSFVEKIYMDILLCIIKIPRINAQLFFESTKKIINKSISNA 1097

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETNQEGIEKTNQNTMNFISTIKNPFSNF             NCDLSSLSQAYVFYKLSQN
Sbjct: 1098 ETNQEGIEKTNQNTMNFISTIKNPFSNFSNTNISNKNIRNNNCDLSSLSQAYVFYKLSQN 1157

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QLLNKY+L SVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY
Sbjct: 1158 QLLNKYHLNSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1217

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1002
            QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI
Sbjct: 1218 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1277

Query: 1001 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESFYR 822
            SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGST  LQVED+KIPYNFNTNT KSESFYR
Sbjct: 1278 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGST--LQVEDQKIPYNFNTNTLKSESFYR 1335

Query: 821  LISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHKNA 642
            LISI ISDYLEKRSIIDMDKNMDRKFFDCRILHFCLR NIDIETWANTHTGTK  IHKNA
Sbjct: 1336 LISISISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRKNIDIETWANTHTGTK--IHKNA 1393

Query: 641  KTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPEFV 462
            KTETQNSQKFEKKDPFSFTIHHKINPSNQKK FFDWIGMNQERLYHTISNLEPWFFPEFV
Sbjct: 1394 KTETQNSQKFEKKDPFSFTIHHKINPSNQKKYFFDWIGMNQERLYHTISNLEPWFFPEFV 1453

Query: 461  LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENSXX 282
            LLFDVYKINPWIIPIKLLIF F FYEKNISQNEKI+VNKKKNLSILANQKEYLE  NS  
Sbjct: 1454 LLFDVYKINPWIIPIKLLIFDFSFYEKNISQNEKIDVNKKKNLSILANQKEYLEFSNSNQ 1513

Query: 281  XXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEKIFSF 102
                    GDFVSDL KQNKKKNLEED TGADIKKGRKKK  + ++ +   F  +K F F
Sbjct: 1514 KKNKQQGQGDFVSDLGKQNKKKNLEEDYTGADIKKGRKKKQFKSKKEAELDFFLKKYFLF 1573



 Score = 91.7 bits (226), Expect = 3e-15
 Identities = 45/62 (72%), Positives = 51/62 (82%)
 Frame = -3

Query: 229  KTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 50
            + K+K L++      +KK  +KKQFKSKKEAELDFFLKKYFLFQ RWDDSLNQRMINNIK
Sbjct: 1531 QNKKKNLEEDYTGADIKKGRKKKQFKSKKEAELDFFLKKYFLFQSRWDDSLNQRMINNIK 1590

Query: 49   VY 44
            VY
Sbjct: 1591 VY 1592


>ref|YP_009432360.1| hypothetical protein ycf1 (chloroplast) [Polygonatum stenophyllum]
 gb|ATB18616.1| hypothetical protein ycf1 (chloroplast) [Polygonatum stenophyllum]
          Length = 1817

 Score = 1066 bits (2758), Expect = 0.0
 Identities = 533/605 (88%), Positives = 550/605 (90%), Gaps = 2/605 (0%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESK+DI
Sbjct: 979  TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKKDI 1038

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            WQIFKRKNIRVIRKS+YFMK FVEKIY+DILL IIKIPRINAQLFFESTKK+INKSISNA
Sbjct: 1039 WQIFKRKNIRVIRKSYYFMKSFVEKIYIDILLCIIKIPRINAQLFFESTKKMINKSISNA 1098

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETNQEGIEKTNQNTMNFISTIKNPFSNF             NCDLSSLSQAYVFYKLSQN
Sbjct: 1099 ETNQEGIEKTNQNTMNFISTIKNPFSNFSNTNISNQNVRNNNCDLSSLSQAYVFYKLSQN 1158

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QLLNKY+LKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKK+HKSGMNKWKNWLRGHY
Sbjct: 1159 QLLNKYHLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKMHKSGMNKWKNWLRGHY 1218

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1002
            QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI
Sbjct: 1219 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1278

Query: 1001 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESFYR 822
            SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGST  LQ+EDKKIPYNFNTNT KSESFYR
Sbjct: 1279 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGST--LQIEDKKIPYNFNTNTLKSESFYR 1336

Query: 821  LISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHKNA 642
            LISI ISDYLEKRS IDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTG K  IHKNA
Sbjct: 1337 LISISISDYLEKRSFIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGAK--IHKNA 1394

Query: 641  KTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPEFV 462
            KTETQNSQKFEKKDPFSFTIHHKIN  NQK  F DWIGMNQERLYHTISNLEPWFFPEFV
Sbjct: 1395 KTETQNSQKFEKKDPFSFTIHHKINLPNQKNIFLDWIGMNQERLYHTISNLEPWFFPEFV 1454

Query: 461  LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENSXX 282
            LLFDVYKINPWIIPIKLLIF+ HFYEKNISQNEKI+VNKKKNLSILANQKEYLELENS  
Sbjct: 1455 LLFDVYKINPWIIPIKLLIFNLHFYEKNISQNEKIDVNKKKNLSILANQKEYLELENSNP 1514

Query: 281  XXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADI--KKGRKKKTIQEQERSRTGFLPEKIF 108
                    GDFVSDLRKQNK +NLEED TGADI  KKGRKKK  + ++ +   F  +K F
Sbjct: 1515 PKNKQQGQGDFVSDLRKQNKNENLEEDYTGADIKMKKGRKKKQFKSKKEAELDFFLKKHF 1574

Query: 107  SFSIK 93
             F ++
Sbjct: 1575 LFQLR 1579



 Score = 89.0 bits (219), Expect = 2e-14
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -3

Query: 184  LKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIKVY 44
            +KK  +KKQFKSKKEAELDFFLKK+FLFQLRWDDSLNQRM+NNIKVY
Sbjct: 1549 MKKGRKKKQFKSKKEAELDFFLKKHFLFQLRWDDSLNQRMLNNIKVY 1595


>gb|AEX94029.1| hypothetical chloroplast RF19 (chloroplast) [Liriope spicata]
          Length = 1807

 Score = 1056 bits (2731), Expect = 0.0
 Identities = 528/603 (87%), Positives = 539/603 (89%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            TIRIRS NCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESK+DI
Sbjct: 990  TIRIRSTNCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKKDI 1049

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA
Sbjct: 1050 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1109

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETNQE IEKTNQNTMNFISTIKN FSNF             NCDLSSLSQAYVFYKLSQN
Sbjct: 1110 ETNQERIEKTNQNTMNFISTIKNKFSNFSNTNISNKNIRNNNCDLSSLSQAYVFYKLSQN 1169

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QLLNKY+LKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY
Sbjct: 1170 QLLNKYHLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1229

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1002
            QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI
Sbjct: 1230 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1289

Query: 1001 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESFYR 822
            SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGST  LQVEDKKIPYNFNTNT KSESFYR
Sbjct: 1290 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGST--LQVEDKKIPYNFNTNTLKSESFYR 1347

Query: 821  LISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHKNA 642
            LISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHKNA
Sbjct: 1348 LISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHKNA 1407

Query: 641  KTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPEFV 462
            KTETQ                    P+  KK FFDWIGMNQERLYHTISNLEPWFFPEFV
Sbjct: 1408 KTETQ--------------------PTQSKKDFFDWIGMNQERLYHTISNLEPWFFPEFV 1447

Query: 461  LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENSXX 282
            LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKI+VNKKKNLSILANQKEYLELENS  
Sbjct: 1448 LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKIDVNKKKNLSILANQKEYLELENSNQ 1507

Query: 281  XXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEKIFSF 102
                    GDFVSDLRKQNKKKNLEEDDTGADIKKGRKKK  + ++ +   F  +K F F
Sbjct: 1508 KKNKQQGQGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKQFKSKKEAELDFFLKKYFLF 1567

Query: 101  SIK 93
             ++
Sbjct: 1568 QLR 1570



 Score = 94.4 bits (233), Expect = 4e-16
 Identities = 46/62 (74%), Positives = 52/62 (83%)
 Frame = -3

Query: 229  KTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 50
            + K+K L++      +KK  +KKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK
Sbjct: 1525 QNKKKNLEEDDTGADIKKGRKKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 1584

Query: 49   VY 44
            VY
Sbjct: 1585 VY 1586


>gb|AEX94026.1| hypothetical chloroplast RF19 (chloroplast) [Beaucarnea hookeri]
          Length = 1798

 Score = 1037 bits (2682), Expect = 0.0
 Identities = 524/603 (86%), Positives = 537/603 (89%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESK+DI
Sbjct: 980  TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKKDI 1039

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            WQIFKRKNIRVIRKSHYFMK FVEKIYMDILL IIKIPRINAQLFFESTKKIINKSISNA
Sbjct: 1040 WQIFKRKNIRVIRKSHYFMKSFVEKIYMDILLCIIKIPRINAQLFFESTKKIINKSISNA 1099

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETNQEGIEKTNQNTMNFISTIKN FS+F             NCDLSSLSQAYVFYKLSQN
Sbjct: 1100 ETNQEGIEKTNQNTMNFISTIKNLFSHFSNTNISNKNIRNNNCDLSSLSQAYVFYKLSQN 1159

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QLLNKY+LKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY
Sbjct: 1160 QLLNKYHLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1219

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1002
            QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI
Sbjct: 1220 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1279

Query: 1001 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESFYR 822
            SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGST  LQVED+KIPYNFNTNT KSESFYR
Sbjct: 1280 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGST--LQVEDQKIPYNFNTNTLKSESFYR 1337

Query: 821  LISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHKNA 642
            LISI ISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTK  IHKNA
Sbjct: 1338 LISISISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTK--IHKNA 1395

Query: 641  KTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPEFV 462
            KTET                 HKINPSNQKK FFDWIGMNQERLYHTISNLEPWFFPEFV
Sbjct: 1396 KTET-----------------HKINPSNQKKYFFDWIGMNQERLYHTISNLEPWFFPEFV 1438

Query: 461  LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENSXX 282
            LLFDVYKINPWIIPIKLLIF F FYEKNISQNEKI++NKKKNLSILANQKEYLELENS  
Sbjct: 1439 LLFDVYKINPWIIPIKLLIFDFSFYEKNISQNEKIDINKKKNLSILANQKEYLELENSNQ 1498

Query: 281  XXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEKIFSF 102
                    GDFVSDL KQNKKKNLEED TGADIKKGRKKK  + ++ +   F  +K F F
Sbjct: 1499 KKNKQQGQGDFVSDLGKQNKKKNLEEDYTGADIKKGRKKKQFKSKKEAELDFFLKKYFLF 1558

Query: 101  SIK 93
             ++
Sbjct: 1559 QLR 1561



 Score = 94.0 bits (232), Expect = 5e-16
 Identities = 46/62 (74%), Positives = 52/62 (83%)
 Frame = -3

Query: 229  KTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 50
            + K+K L++      +KK  +KKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK
Sbjct: 1516 QNKKKNLEEDYTGADIKKGRKKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 1575

Query: 49   VY 44
            VY
Sbjct: 1576 VY 1577


>gb|AEX94033.1| hypothetical chloroplast RF19 (chloroplast) [Maianthemum stellatum]
          Length = 1800

 Score = 1020 bits (2638), Expect = 0.0
 Identities = 516/603 (85%), Positives = 533/603 (88%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            TIRIRSANCVN NYSLIETKMKDLA KTITIRTQIEGITKGKKK +RACDDKRSESK+DI
Sbjct: 982  TIRIRSANCVNANYSLIETKMKDLAKKTITIRTQIEGITKGKKKRIRACDDKRSESKKDI 1041

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            WQIFK KNIRVIRKSHYFMK FVEKIYMDILL IIKIPRINAQLFFESTKKIINKSISNA
Sbjct: 1042 WQIFKIKNIRVIRKSHYFMKSFVEKIYMDILLCIIKIPRINAQLFFESTKKIINKSISNA 1101

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETN+EGIEKTN+NTMNFISTIKN FSNF             NCDLSSLSQAYVFYKLSQN
Sbjct: 1102 ETNKEGIEKTNKNTMNFISTIKNSFSNFSNTNISKKNIRNNNCDLSSLSQAYVFYKLSQN 1161

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QLLNKY+LKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKK+HKSGMNKWKNWLRGHY
Sbjct: 1162 QLLNKYHLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKMHKSGMNKWKNWLRGHY 1221

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1002
            QYNLSQTKW HLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI
Sbjct: 1222 QYNLSQTKWVHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1281

Query: 1001 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESFYR 822
            S+KEKWKKHYGYDLLSYKYINYGNSKDSYISGST  LQVEDKKIPYNFNTNT KSESF R
Sbjct: 1282 SKKEKWKKHYGYDLLSYKYINYGNSKDSYISGST--LQVEDKKIPYNFNTNTLKSESFSR 1339

Query: 821  LISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHKNA 642
            LISI ISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTK  IHKNA
Sbjct: 1340 LISISISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTK--IHKNA 1397

Query: 641  KTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPEFV 462
            KTETQ                 KINPSNQK  FFDWIGMNQERLYHTISNLEPWFFPEFV
Sbjct: 1398 KTETQ-----------------KINPSNQKHIFFDWIGMNQERLYHTISNLEPWFFPEFV 1440

Query: 461  LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENSXX 282
            LLFDVYKINPWIIPIKLLI +FHFYEKNISQNEKI+VNKKKNLSILANQKEYLELENS  
Sbjct: 1441 LLFDVYKINPWIIPIKLLILNFHFYEKNISQNEKIDVNKKKNLSILANQKEYLELENSNQ 1500

Query: 281  XXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEKIFSF 102
                    GDFVSDLRKQNKKKNLEED TGADIKKGRKKK ++ ++ +   F  +K F F
Sbjct: 1501 KKNKQQGQGDFVSDLRKQNKKKNLEEDYTGADIKKGRKKKQLKSKKEAELDFFLKKYFLF 1560

Query: 101  SIK 93
             ++
Sbjct: 1561 QLR 1563



 Score = 91.7 bits (226), Expect = 3e-15
 Identities = 45/62 (72%), Positives = 51/62 (82%)
 Frame = -3

Query: 229  KTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 50
            + K+K L++      +KK  +KKQ KSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK
Sbjct: 1518 QNKKKNLEEDYTGADIKKGRKKKQLKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 1577

Query: 49   VY 44
            VY
Sbjct: 1578 VY 1579


>gb|AEX94031.1| hypothetical chloroplast RF19 (chloroplast) [Ruscus aculeatus]
          Length = 1543

 Score =  967 bits (2500), Expect = 0.0
 Identities = 490/579 (84%), Positives = 509/579 (87%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            TIRIRSANCVNEN SLIETK KDLANKTI IRTQIEGITK KKK VRACDDKRSESK++I
Sbjct: 957  TIRIRSANCVNENDSLIETKTKDLANKTIAIRTQIEGITKDKKKRVRACDDKRSESKKNI 1016

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
             QIFKRKNIRVIRK+HYFMK FVEKIYMDILL IIKIPRIN QLFFESTKKIINKSISNA
Sbjct: 1017 CQIFKRKNIRVIRKAHYFMKSFVEKIYMDILLCIIKIPRINTQLFFESTKKIINKSISNA 1076

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETNQEGIEKTNQNTMNFISTI+NPFSNF             NCDLSSLSQAYVFYKLSQN
Sbjct: 1077 ETNQEGIEKTNQNTMNFISTIRNPFSNFSNTNISNQNIRNNNCDLSSLSQAYVFYKLSQN 1136

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
             LLNKY+LKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKK+HKSG++KWKNWL+GHY
Sbjct: 1137 PLLNKYHLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKMHKSGIHKWKNWLKGHY 1196

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1002
            QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDS KLDLYKKEKDQLIHYTKQNYYAVD SI
Sbjct: 1197 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSRKLDLYKKEKDQLIHYTKQNYYAVDLSI 1256

Query: 1001 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESFYR 822
            SQKEKWKKHYGYDLLSYKYINY NSKDSYISG  L LQVEDK+IPYNFN NT KSESF R
Sbjct: 1257 SQKEKWKKHYGYDLLSYKYINYVNSKDSYISG--LTLQVEDKRIPYNFNKNTLKSESFSR 1314

Query: 821  LISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHKNA 642
            LISI ISDYLEKRSIID DKNMDRKFFDCRILHFCLRNNIDIETWANTH GTK  IHKNA
Sbjct: 1315 LISISISDYLEKRSIIDRDKNMDRKFFDCRILHFCLRNNIDIETWANTHIGTK--IHKNA 1372

Query: 641  KTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPEFV 462
            KTET NSQKFEKKDPFSFTIHHKINPSNQK  FFDWIGMNQERLYHTISNLEPWFFPEFV
Sbjct: 1373 KTETPNSQKFEKKDPFSFTIHHKINPSNQKNIFFDWIGMNQERLYHTISNLEPWFFPEFV 1432

Query: 461  LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENSXX 282
            LLF+VYKINPWIIPIKLLI  FHFYEK+ISQNEKI+VNKKKNLSILANQKEYLELENS  
Sbjct: 1433 LLFNVYKINPWIIPIKLLI--FHFYEKSISQNEKIHVNKKKNLSILANQKEYLELENSNK 1490

Query: 281  XXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKK 165
                    G        + K+K L++      +KK  +K
Sbjct: 1491 KKTNNKVKGILYQIYENKTKRKILKKITREQTLKKVERK 1529


>gb|AEX94032.1| hypothetical chloroplast RF19 (chloroplast) [Sansevieria trifasciata]
          Length = 1803

 Score =  960 bits (2482), Expect = 0.0
 Identities = 492/604 (81%), Positives = 516/604 (85%), Gaps = 2/604 (0%)
 Frame = -2

Query: 1898 IRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDIW 1719
            IR++SANCVNENYSLIE KMKDLANKTITIRTQIEGITK KKK VRACDDKRSESK++I 
Sbjct: 984  IRMQSANCVNENYSLIEKKMKDLANKTITIRTQIEGITKDKKKTVRACDDKRSESKKNIL 1043

Query: 1718 QIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNAE 1539
            QIFKRKNIRVIRKSHYFMK FVEK  MDILL IIKI R NAQLFFESTKKIINKSISNAE
Sbjct: 1044 QIFKRKNIRVIRKSHYFMKSFVEKKCMDILLCIIKISRGNAQLFFESTKKIINKSISNAE 1103

Query: 1538 TNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQNQ 1359
            TNQEGIEKTN+NTMNFISTIKN FSNF             NCDLSSLSQAYVFYKLSQNQ
Sbjct: 1104 TNQEGIEKTNKNTMNFISTIKNLFSNFSNTNISNKNIRNNNCDLSSLSQAYVFYKLSQNQ 1163

Query: 1358 LLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHYQ 1179
            LLNKY+LKS+LQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWL+GHYQ
Sbjct: 1164 LLNKYHLKSILQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLKGHYQ 1223

Query: 1178 YNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSIS 999
            YNLSQTKWDHLVPKKWRNRVNQCR IQKKDSMKLDLYKKEKDQLIHYTK+NYYAV+SSIS
Sbjct: 1224 YNLSQTKWDHLVPKKWRNRVNQCRMIQKKDSMKLDLYKKEKDQLIHYTKKNYYAVNSSIS 1283

Query: 998  QKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESFYRL 819
            QKEK KKHYGY+LLSYK+INY NSKD YISGST  LQVEDKKIPYNFNTNT KSESFY+ 
Sbjct: 1284 QKEKVKKHYGYNLLSYKHINYVNSKDLYISGST--LQVEDKKIPYNFNTNTLKSESFYKF 1341

Query: 818  ISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHKNAK 639
            ISI ISDYLEK SIIDMDKNMDRKFFDCRILH CLRNNIDIETWANTH GTK  IHKNAK
Sbjct: 1342 ISISISDYLEKGSIIDMDKNMDRKFFDCRILHSCLRNNIDIETWANTHIGTK--IHKNAK 1399

Query: 638  TETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTI--SNLEPWFFPEF 465
            TE Q                    P   KKSFFDWIGMNQERLYHTI  SNLEPWFFPEF
Sbjct: 1400 TENQ--------------------PIQSKKSFFDWIGMNQERLYHTISKSNLEPWFFPEF 1439

Query: 464  VLLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENSX 285
            VLLFD+YKINPWIIPIKLLIFHFHFYEKNISQNEKI+VNKK+N+SI ANQKEYLELENS 
Sbjct: 1440 VLLFDMYKINPWIIPIKLLIFHFHFYEKNISQNEKIHVNKKENISISANQKEYLELENSN 1499

Query: 284  XXXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEKIFS 105
                     GDFVSDLRKQNKKKNLEED TGADIKKGRKKK  + ++ +   F  +K F 
Sbjct: 1500 KKKNKQQDQGDFVSDLRKQNKKKNLEEDYTGADIKKGRKKKQFKSKKEAELDFFLKKYFL 1559

Query: 104  FSIK 93
            F ++
Sbjct: 1560 FQLR 1563



 Score = 94.0 bits (232), Expect = 5e-16
 Identities = 46/62 (74%), Positives = 52/62 (83%)
 Frame = -3

Query: 229  KTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 50
            + K+K L++      +KK  +KKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK
Sbjct: 1518 QNKKKNLEEDYTGADIKKGRKKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 1577

Query: 49   VY 44
            VY
Sbjct: 1578 VY 1579


>gb|AEX94009.1| hypothetical chloroplast RF19 (chloroplast) [Asparagus asparagoides]
          Length = 1808

 Score =  928 bits (2399), Expect = 0.0
 Identities = 479/607 (78%), Positives = 511/607 (84%), Gaps = 4/607 (0%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            T +IRS NCVNENYSLIETK+KDLANK ITIRTQ EGITK KKKIVR CDDKRSES++DI
Sbjct: 990  TTQIRSMNCVNENYSLIETKIKDLANKIITIRTQTEGITKDKKKIVRICDDKRSESQKDI 1049

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            W+IFKRKNIR+IRKSHYF+K  +EKIY+DILL IIKIPRINAQLFFESTKKIINKSI N 
Sbjct: 1050 WKIFKRKNIRLIRKSHYFIKSPIEKIYIDILLCIIKIPRINAQLFFESTKKIINKSIYND 1109

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETNQEGIEKTNQNTMNFISTIK  FSN               CDLSSLSQAYVFYKLSQN
Sbjct: 1110 ETNQEGIEKTNQNTMNFISTIKKSFSN---------------CDLSSLSQAYVFYKLSQN 1154

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QLLNKY+L+SVLQY  TYPFL DIIKNYCTTRGIFDSKPR KKIHKSGMNKWKNWLR HY
Sbjct: 1155 QLLNKYHLRSVLQYQGTYPFLSDIIKNYCTTRGIFDSKPRYKKIHKSGMNKWKNWLRSHY 1214

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNY--YAVDS 1008
            QYNLSQTKW  LVPKKWRNRVNQCRTIQKKDSMKLDLY+K+KDQLIHY KQN   YAVDS
Sbjct: 1215 QYNLSQTKWSPLVPKKWRNRVNQCRTIQKKDSMKLDLYRKKKDQLIHYMKQNCYPYAVDS 1274

Query: 1007 SISQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESF 828
            SI QKEK KKHYGYDLLS KYINYGNS +SYI GST  LQV DKKIPYNF+T+  K ESF
Sbjct: 1275 SIRQKEKLKKHYGYDLLSSKYINYGNSGNSYIYGST--LQVGDKKIPYNFSTS--KPESF 1330

Query: 827  YRLISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHK 648
            YRLISI ISDYLEKRSIID  KNMDRKFFDCRILHFC+RNNI+I+TWANTH  T   IHK
Sbjct: 1331 YRLISIAISDYLEKRSIIDTTKNMDRKFFDCRILHFCIRNNIEIKTWANTHIDT--IIHK 1388

Query: 647  NAKTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPE 468
            NAKTETQN QKFEKKD FSFTI HKINPSNQKK FFDW+GMNQERLYHTISNLEPWFFPE
Sbjct: 1389 NAKTETQNFQKFEKKDLFSFTIDHKINPSNQKKYFFDWMGMNQERLYHTISNLEPWFFPE 1448

Query: 467  FVLLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNL--SILANQKEYLELE 294
            FVLLFD YKI PWIIPIKLLIFHFHFYE NISQNEKI +N KKNL  SIL NQKEYLELE
Sbjct: 1449 FVLLFDAYKIKPWIIPIKLLIFHFHFYE-NISQNEKIGINHKKNLSISILVNQKEYLELE 1507

Query: 293  NSXXXXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEK 114
                         DFV DL+KQNKKK++EED TGADIKKGRKKK  + ++ +   F+ +K
Sbjct: 1508 KK---KNEQQGQEDFVFDLKKQNKKKDVEEDYTGADIKKGRKKKQFKSKKEAELNFVLKK 1564

Query: 113  IFSFSIK 93
             F F ++
Sbjct: 1565 YFLFQLR 1571



 Score = 86.7 bits (213), Expect = 1e-13
 Identities = 42/64 (65%), Positives = 51/64 (79%)
 Frame = -3

Query: 235  ENKTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINN 56
            + + K+K +++      +KK  +KKQFKSKKEAEL+F LKKYFLFQLRWDD LNQRMINN
Sbjct: 1524 KKQNKKKDVEEDYTGADIKKGRKKKQFKSKKEAELNFVLKKYFLFQLRWDDPLNQRMINN 1583

Query: 55   IKVY 44
            IKVY
Sbjct: 1584 IKVY 1587


>ref|YP_009431190.1| hypothetical protein ycf1 (chloroplast) [Asparagus schoberioides]
 gb|ASW26627.1| hypothetical protein ycf1 (chloroplast) [Asparagus schoberioides]
          Length = 1812

 Score =  922 bits (2384), Expect = 0.0
 Identities = 474/605 (78%), Positives = 509/605 (84%), Gaps = 2/605 (0%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            T +IRS NCVNEN SLIETK+KDLANKTITIRTQ EGITK KKKIVR CDDKRSES++DI
Sbjct: 994  TTQIRSMNCVNENSSLIETKIKDLANKTITIRTQTEGITKDKKKIVRICDDKRSESQKDI 1053

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            W+IFKRKNIR+IRKSHYF+K  +EKIY+DILL IIKIPRINAQLFFESTKKIINKSI N 
Sbjct: 1054 WKIFKRKNIRLIRKSHYFIKSLIEKIYIDILLCIIKIPRINAQLFFESTKKIINKSIYND 1113

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETNQEGIEKTNQNTMNFISTIK  FSN               CDLSSLSQAYVFYKLSQN
Sbjct: 1114 ETNQEGIEKTNQNTMNFISTIKKSFSNIS-------------CDLSSLSQAYVFYKLSQN 1160

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QLLNKY+L+SVLQY  TYPFL DIIKNYCTTRGIFDSKPR KKIHKSGMNKWKNWL  HY
Sbjct: 1161 QLLNKYHLRSVLQYQGTYPFLSDIIKNYCTTRGIFDSKPRYKKIHKSGMNKWKNWLTSHY 1220

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNY--YAVDS 1008
            QYNLSQTKW  LVPKKWRNRVNQCRTIQKK+SMKLDLY+K+KDQLIHY KQN   YAVDS
Sbjct: 1221 QYNLSQTKWSPLVPKKWRNRVNQCRTIQKKNSMKLDLYRKKKDQLIHYMKQNCYPYAVDS 1280

Query: 1007 SISQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESF 828
            SI QKEK KKHYGYDLLSYKYINYGNS +SYI GST  LQV DKKIPYNF  +T K ESF
Sbjct: 1281 SIRQKEKLKKHYGYDLLSYKYINYGNSGNSYIYGST--LQVGDKKIPYNF--STPKPESF 1336

Query: 827  YRLISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHK 648
            Y LISI ISDYLEKRSIID +KNMDRKFFDCRILHFC+RNNI+I+TW NTH  T   IHK
Sbjct: 1337 YGLISIAISDYLEKRSIIDTNKNMDRKFFDCRILHFCIRNNIEIQTWTNTHIDT--TIHK 1394

Query: 647  NAKTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPE 468
            NAKTET+N QKFEKKD FSFTI HKINPSNQK  FFDW+GMNQERLYHTISNLEPWFFPE
Sbjct: 1395 NAKTETKNFQKFEKKDLFSFTIDHKINPSNQKNIFFDWMGMNQERLYHTISNLEPWFFPE 1454

Query: 467  FVLLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENS 288
            FVLLFD YKI PWIIPIKLLIFHF+   +NISQNEKI +N KKNL ILANQKEYLELENS
Sbjct: 1455 FVLLFDAYKIKPWIIPIKLLIFHFY---ENISQNEKIGINHKKNLPILANQKEYLELENS 1511

Query: 287  XXXXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEKIF 108
                      GDFVSDL+KQNKKK++EED TGADIKKGRKKK  + ++ +   F  +K F
Sbjct: 1512 -KKKNEQQGQGDFVSDLKKQNKKKDVEEDYTGADIKKGRKKKQFKSKKEAELNFFLKKYF 1570

Query: 107  SFSIK 93
             F ++
Sbjct: 1571 LFQLR 1575



 Score = 89.4 bits (220), Expect = 1e-14
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = -3

Query: 235  ENKTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINN 56
            + + K+K +++      +KK  +KKQFKSKKEAEL+FFLKKYFLFQLRWDD LNQRMINN
Sbjct: 1528 KKQNKKKDVEEDYTGADIKKGRKKKQFKSKKEAELNFFLKKYFLFQLRWDDPLNQRMINN 1587

Query: 55   IKVY 44
            IKVY
Sbjct: 1588 IKVY 1591


>emb|CUS18688.1| hypothetical protein ycf1 (plastid) [Asparagus officinalis]
          Length = 1815

 Score =  918 bits (2372), Expect = 0.0
 Identities = 472/605 (78%), Positives = 510/605 (84%), Gaps = 2/605 (0%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            T +IRS NCVNEN SLIETK+KDLANKTITIRTQ EGITK KKKIVR CDDKRSES++DI
Sbjct: 994  TTQIRSMNCVNENSSLIETKIKDLANKTITIRTQTEGITKDKKKIVRICDDKRSESQKDI 1053

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            W+IFKRKNIR+IRKSHYF+K  +EKIY+DILL IIKIPRINAQL FESTKKIINKSI N 
Sbjct: 1054 WKIFKRKNIRLIRKSHYFIKSLIEKIYIDILLCIIKIPRINAQLLFESTKKIINKSIYND 1113

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETNQEGIEKTNQNTMNFISTIK  FSN              +CDLSSLSQAYVFYKLSQN
Sbjct: 1114 ETNQEGIEKTNQNTMNFISTIKKSFSN-------------KSCDLSSLSQAYVFYKLSQN 1160

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QLLNKY+L+SVLQY  TYPFL DIIKNYCTTRGIFDSKPR KKIHKSGMNKWKNWLR HY
Sbjct: 1161 QLLNKYHLRSVLQYQGTYPFLSDIIKNYCTTRGIFDSKPRYKKIHKSGMNKWKNWLRSHY 1220

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNY--YAVDS 1008
            QYNLSQTKW  LVPKKWRNRVNQCRTIQKK+SMKLDLY+K+KDQLIHY KQN   YAVDS
Sbjct: 1221 QYNLSQTKWSPLVPKKWRNRVNQCRTIQKKNSMKLDLYRKKKDQLIHYMKQNCYPYAVDS 1280

Query: 1007 SISQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESF 828
            SI QKEK KKHYGYDLLSYKYINYGNS +SYI GST  LQV DKKIPYNF  +T K ESF
Sbjct: 1281 SIRQKEKLKKHYGYDLLSYKYINYGNSGNSYIYGST--LQVGDKKIPYNF--STPKPESF 1336

Query: 827  YRLISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHK 648
            Y LISI ISDYLEKRSIID +KNMDRKFFDCRILHFC+RNNI+I+TW N H  T   IHK
Sbjct: 1337 YGLISIAISDYLEKRSIIDTNKNMDRKFFDCRILHFCIRNNIEIKTWTNRHIDT--TIHK 1394

Query: 647  NAKTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPE 468
            NAKTETQN QKFEKKD FSFTI HKINPSN+KK FFDW+GMNQERLYHTISNL+PWFFPE
Sbjct: 1395 NAKTETQNFQKFEKKDLFSFTIDHKINPSNKKKYFFDWMGMNQERLYHTISNLKPWFFPE 1454

Query: 467  FVLLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENS 288
            FVLLFD YK+ PWIIPIKLLIFHF+   +NISQNEKI +N KKNL ILANQKEYLELENS
Sbjct: 1455 FVLLFDTYKMKPWIIPIKLLIFHFY---ENISQNEKIGLNHKKNLPILANQKEYLELENS 1511

Query: 287  XXXXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEKIF 108
                      GDFVSDL+KQNKKK++EED TGADIKKGRKKK  + ++ +   F  +K F
Sbjct: 1512 -KKKNEQQGQGDFVSDLKKQNKKKDVEEDYTGADIKKGRKKKQFKSKKEAELNFFLKKYF 1570

Query: 107  SFSIK 93
             F ++
Sbjct: 1571 LFQLR 1575



 Score = 89.4 bits (220), Expect = 1e-14
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = -3

Query: 235  ENKTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINN 56
            + + K+K +++      +KK  +KKQFKSKKEAEL+FFLKKYFLFQLRWDD LNQRMINN
Sbjct: 1528 KKQNKKKDVEEDYTGADIKKGRKKKQFKSKKEAELNFFLKKYFLFQLRWDDPLNQRMINN 1587

Query: 55   IKVY 44
            IKVY
Sbjct: 1588 IKVY 1591


>gb|AEX94008.1| hypothetical chloroplast RF19 (chloroplast) [Asparagus officinalis]
 emb|CUS18769.1| hypothetical protein ycf1 (plastid) [Asparagus officinalis]
          Length = 1815

 Score =  918 bits (2372), Expect = 0.0
 Identities = 472/605 (78%), Positives = 510/605 (84%), Gaps = 2/605 (0%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            T +IRS NCVNEN SLIETK+KDLANKTITIRTQ EGITK KKKIVR CDDKRSES++DI
Sbjct: 994  TTQIRSMNCVNENSSLIETKIKDLANKTITIRTQTEGITKDKKKIVRICDDKRSESQKDI 1053

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            W+IFKRKNIR+IRKSHYF+K  +EKIY+DILL IIKIPRINAQL FESTKKIINKSI N 
Sbjct: 1054 WKIFKRKNIRLIRKSHYFIKSLIEKIYIDILLCIIKIPRINAQLLFESTKKIINKSIYND 1113

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETNQEGIEKTNQNTMNFISTIK  FSN              +CDLSSLSQAYVFYKLSQN
Sbjct: 1114 ETNQEGIEKTNQNTMNFISTIKKSFSN-------------KSCDLSSLSQAYVFYKLSQN 1160

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QLLNKY+L+SVLQY  TYPFL DIIKNYCTTRGIFDSKPR KKIHKSGMNKWKNWLR HY
Sbjct: 1161 QLLNKYHLRSVLQYQGTYPFLSDIIKNYCTTRGIFDSKPRYKKIHKSGMNKWKNWLRSHY 1220

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNY--YAVDS 1008
            QYNLSQTKW  LVPKKWRNRVNQCRTIQKK+SMKLDLY+K+KDQLIHY KQN   YAVDS
Sbjct: 1221 QYNLSQTKWSPLVPKKWRNRVNQCRTIQKKNSMKLDLYRKKKDQLIHYMKQNCYPYAVDS 1280

Query: 1007 SISQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESF 828
            SI QKEK KKHYGYDLLSYKYINYGNS +SYI GST  LQV DKKIPYNF  +T K ESF
Sbjct: 1281 SIRQKEKLKKHYGYDLLSYKYINYGNSGNSYIYGST--LQVGDKKIPYNF--STPKPESF 1336

Query: 827  YRLISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHK 648
            Y LISI ISDYLEKRSIID +KNMDRKFFDCRILHFC+RNNI+I+TW N H  T   IHK
Sbjct: 1337 YGLISIAISDYLEKRSIIDTNKNMDRKFFDCRILHFCIRNNIEIKTWTNRHIDT--TIHK 1394

Query: 647  NAKTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPE 468
            NAKTETQN QKFEKKD FSFTI HKINPSN+KK FFDW+GMNQERLYHTISNL+PWFFPE
Sbjct: 1395 NAKTETQNFQKFEKKDLFSFTIDHKINPSNKKKYFFDWMGMNQERLYHTISNLKPWFFPE 1454

Query: 467  FVLLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENS 288
            FVLLFD YK+ PWIIPIKLLIFHF+   +NISQNEKI +N KKNL ILANQKEYLELENS
Sbjct: 1455 FVLLFDTYKMKPWIIPIKLLIFHFY---ENISQNEKIGLNHKKNLPILANQKEYLELENS 1511

Query: 287  XXXXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEKIF 108
                      GDFVSDL+KQNKKK++EED TGADIKKGRKKK  + ++ +   F  +K F
Sbjct: 1512 -KKKNEQQGQGDFVSDLKKQNKKKDVEEDYTGADIKKGRKKKQFKSKKEAELNFFLKKYF 1570

Query: 107  SFSIK 93
             F ++
Sbjct: 1571 LFQLR 1575



 Score = 89.4 bits (220), Expect = 1e-14
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = -3

Query: 235  ENKTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINN 56
            + + K+K +++      +KK  +KKQFKSKKEAEL+FFLKKYFLFQLRWDD LNQRMINN
Sbjct: 1528 KKQNKKKDVEEDYTGADIKKGRKKKQFKSKKEAELNFFLKKYFLFQLRWDDPLNQRMINN 1587

Query: 55   IKVY 44
            IKVY
Sbjct: 1588 IKVY 1591


>ref|YP_009432446.1| hypothetical protein ycf1 (chloroplast) [Xanthorrhoea preissii]
 gb|ATB18702.1| hypothetical protein ycf1 (chloroplast) [Xanthorrhoea preissii]
          Length = 1828

 Score =  896 bits (2315), Expect = 0.0
 Identities = 463/614 (75%), Positives = 498/614 (81%), Gaps = 11/614 (1%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            T+RIR  N VNENYSLIETKMKDLANKTITIRTQIEGITK KKKIVR CDDKRSES++DI
Sbjct: 994  TVRIRPTNWVNENYSLIETKMKDLANKTITIRTQIEGITKDKKKIVRTCDDKRSESQKDI 1053

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            WQIFKRKNIR+IRKSHYFMK F+EKIY+DILL  IKIPRINAQLFFESTKKIINKSI + 
Sbjct: 1054 WQIFKRKNIRLIRKSHYFMKSFIEKIYIDILLCTIKIPRINAQLFFESTKKIINKSIYDD 1113

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETNQ+GIEKTNQNTMNFI  IK  FSN               CDLSSLSQAYVFYKL+QN
Sbjct: 1114 ETNQDGIEKTNQNTMNFILAIKKSFSN-----------TNIYCDLSSLSQAYVFYKLAQN 1162

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QLLNKY+L+SVLQYH TYPFLRDIIK+YCTTRGIFDSK R KKIHKS MNKWK+WLRGHY
Sbjct: 1163 QLLNKYHLRSVLQYHSTYPFLRDIIKDYCTTRGIFDSKSRHKKIHKSEMNKWKSWLRGHY 1222

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1002
            QYNLSQTKW HLV KKWRNRVNQ R IQ+KDS KLDLYKKEKD LIHY KQN YA+DS +
Sbjct: 1223 QYNLSQTKWSHLVSKKWRNRVNQRRRIQRKDSTKLDLYKKEKDPLIHYMKQNDYAMDSLM 1282

Query: 1001 SQKEKWKKHYGYDLLSYKYI-----------NYGNSKDSYISGSTLQLQVEDKKIPYNFN 855
            SQKEK KKHY YDLLSYKYI           NYG  KDSYI GST  LQVED+KI YNFN
Sbjct: 1283 SQKEKLKKHYVYDLLSYKYINYGYRKDSYIYNYGYRKDSYIYGST--LQVEDQKISYNFN 1340

Query: 854  TNTQKSESFYRLISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTH 675
             NT K ESFY LISI I+DYLEKRSI+D DKN+DRKFFDCRILHFC R NIDIETW NTH
Sbjct: 1341 FNTLKPESFYGLISIAINDYLEKRSIVDTDKNLDRKFFDCRILHFCFRKNIDIETWTNTH 1400

Query: 674  TGTKIQIHKNAKTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTIS 495
               K  IHKNAKTE +NSQK EKKD FSFT HHKIN SNQKK FFDW+GMNQERLY TIS
Sbjct: 1401 IDNK--IHKNAKTEIKNSQKIEKKDLFSFTTHHKINLSNQKKYFFDWMGMNQERLYRTIS 1458

Query: 494  NLEPWFFPEFVLLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQ 315
            NLEPWFFPEFVLLF  YKI PWIIPIKLLIF FH  E NISQ+EKI+VN+KKNL ILANQ
Sbjct: 1459 NLEPWFFPEFVLLFGAYKIKPWIIPIKLLIFDFHRNE-NISQSEKIDVNQKKNLPILANQ 1517

Query: 314  KEYLELENSXXXXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSR 135
            KE LELENS          GD VS+LRKQNKKK++EED TG DIKKGRKKK  + ++ + 
Sbjct: 1518 KENLELENSKQKKNEQQDQGDLVSNLRKQNKKKDIEEDYTGTDIKKGRKKKQSKSKKEAE 1577

Query: 134  TGFLPEKIFSFSIK 93
              F  +K F F ++
Sbjct: 1578 LDFFLKKYFLFQLR 1591



 Score = 88.2 bits (217), Expect = 3e-14
 Identities = 43/62 (69%), Positives = 50/62 (80%)
 Frame = -3

Query: 229  KTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 50
            + K+K +++      +KK  +KKQ KSKKEAELDFFLKKYFLFQLRWDD LNQRMINNIK
Sbjct: 1546 QNKKKDIEEDYTGTDIKKGRKKKQSKSKKEAELDFFLKKYFLFQLRWDDPLNQRMINNIK 1605

Query: 49   VY 44
            VY
Sbjct: 1606 VY 1607


>gb|AEX94028.1| hypothetical chloroplast RF19 (chloroplast) [Eriospermum cervicorne]
          Length = 1795

 Score =  881 bits (2276), Expect = 0.0
 Identities = 453/603 (75%), Positives = 492/603 (81%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            TI+IRS NC+NENYSLIETKMKDL NKTIT+RTQIE ITK KKKIV A DDKRSES+++I
Sbjct: 979  TIQIRSMNCINENYSLIETKMKDLDNKTITMRTQIERITKDKKKIVLAYDDKRSESQKNI 1038

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            WQIFKRKNIR+IRKSHYFMK F+EKIYMDILL II+IPRINAQLFFESTKKII KSI N 
Sbjct: 1039 WQIFKRKNIRLIRKSHYFMKSFIEKIYMDILLCIIRIPRINAQLFFESTKKIIKKSIYND 1098

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETNQEGIEKTNQNTMNFISTIK P SN               CDLSSLSQAYVFYKLSQN
Sbjct: 1099 ETNQEGIEKTNQNTMNFISTIKKPVSN----TNISNKNSNIYCDLSSLSQAYVFYKLSQN 1154

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QLLNKY+L+SVLQYHHTYPFLRDIIKNYC TRGIFDSK   KKIHKSGMNKWKNWLRG+Y
Sbjct: 1155 QLLNKYHLRSVLQYHHTYPFLRDIIKNYCMTRGIFDSKSGHKKIHKSGMNKWKNWLRGYY 1214

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1002
            QYNLSQTKW  L+PKK RNRVNQCR IQKKDSMKLDLYKKEK QLIHY KQN+YAVDSS+
Sbjct: 1215 QYNLSQTKWSRLIPKKCRNRVNQCRMIQKKDSMKLDLYKKEKGQLIHYMKQNFYAVDSSM 1274

Query: 1001 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESFYR 822
            +QKEK KKHYGYDLLSYKYI YGNSKDSYI GST   QVED+KIP     N  K ESFY 
Sbjct: 1275 NQKEKLKKHYGYDLLSYKYIYYGNSKDSYIYGST--FQVEDEKIP----LNALKPESFYE 1328

Query: 821  LISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHKNA 642
            LI+I ISDYLEKR I+D DKNMDRKFFDCRILHFCLRNNIDIETW + H  TK  IHKNA
Sbjct: 1329 LINIAISDYLEKRFIVDTDKNMDRKFFDCRILHFCLRNNIDIETWTDMHIDTK--IHKNA 1386

Query: 641  KTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPEFV 462
            KTET+NSQKFEK++           P   K  FFDW+GMNQERLYHTISNLEPWFFPEF+
Sbjct: 1387 KTETKNSQKFEKQN----------RPVQPKNIFFDWMGMNQERLYHTISNLEPWFFPEFL 1436

Query: 461  LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENSXX 282
             LFD YK+ PWIIPIKLLIF FHFY KNISQ+EK++VN+KKNL ILANQKEYLELE S  
Sbjct: 1437 PLFDTYKMKPWIIPIKLLIFPFHFY-KNISQSEKVDVNQKKNLPILANQKEYLELEISNK 1495

Query: 281  XXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEKIFSF 102
                     D VSD+RKQNKKK LE+D T ADIKKGRKKK  + ++ +   FL +K F F
Sbjct: 1496 KKNKQQDQEDLVSDIRKQNKKKGLEKDYTEADIKKGRKKKQPKSKKEAELDFLLKKYFLF 1555

Query: 101  SIK 93
             ++
Sbjct: 1556 QLR 1558



 Score = 87.8 bits (216), Expect = 5e-14
 Identities = 44/62 (70%), Positives = 50/62 (80%)
 Frame = -3

Query: 229  KTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 50
            + K+K L+K   E  +KK  +KKQ KSKKEAELDF LKKYFLFQLRWD+ LNQRMINNIK
Sbjct: 1513 QNKKKGLEKDYTEADIKKGRKKKQPKSKKEAELDFLLKKYFLFQLRWDNPLNQRMINNIK 1572

Query: 49   VY 44
            VY
Sbjct: 1573 VY 1574


>ref|YP_009334548.1| hypothetical chloroplast RF19 (chloroplast) [Anemarrhena
            asphodeloides]
 gb|APO11358.1| hypothetical chloroplast RF19 (chloroplast) [Anemarrhena
            asphodeloides]
          Length = 1789

 Score =  880 bits (2275), Expect = 0.0
 Identities = 459/605 (75%), Positives = 488/605 (80%), Gaps = 2/605 (0%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDK--RSESKE 1728
            TIRI+S NCVNENYS+IETKMKDLANKTITIR QIEGITK KKKI+  CDDK  RSES++
Sbjct: 990  TIRIQSMNCVNENYSIIETKMKDLANKTITIRAQIEGITKDKKKIIVTCDDKNKRSESQK 1049

Query: 1727 DIWQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSIS 1548
            DIWQIFKRKNIR+IRKS+YFMK F+EKIYMDILL IIKIPR NAQLFFESTKKIINKSI 
Sbjct: 1050 DIWQIFKRKNIRLIRKSYYFMKSFIEKIYMDILLCIIKIPRTNAQLFFESTKKIINKSIY 1109

Query: 1547 NAETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLS 1368
            N ET+QEGIEKTNQNTMNFISTIK  FSN               CDLSSLSQAYVFYKLS
Sbjct: 1110 NDETSQEGIEKTNQNTMNFISTIKKSFSN----TNISNKNSNIYCDLSSLSQAYVFYKLS 1165

Query: 1367 QNQLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRG 1188
            QNQLLNKY+L+SVLQYH TYPFLRDIIKNYC TRGIFDSKPR KKIHKSGMNKWK WLRG
Sbjct: 1166 QNQLLNKYHLRSVLQYHGTYPFLRDIIKNYCMTRGIFDSKPRHKKIHKSGMNKWKIWLRG 1225

Query: 1187 HYQYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDS 1008
            HYQYNLSQTKW HLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIH  KQNYYAVDS
Sbjct: 1226 HYQYNLSQTKWAHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHCMKQNYYAVDS 1285

Query: 1007 SISQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESF 828
             +SQKEKWKKHYGYDLLSYKYINYG SKDSYI GST  LQV+DKKIPYN   NT + ESF
Sbjct: 1286 LMSQKEKWKKHYGYDLLSYKYINYGGSKDSYIYGST--LQVKDKKIPYNL--NTPELESF 1341

Query: 827  YRLISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHK 648
            Y LISI ISDYLEKRSIID DKN+DRKFFDCRILHFCLRNNIDIETW NTH  TK  IHK
Sbjct: 1342 YGLISIAISDYLEKRSIIDTDKNLDRKFFDCRILHFCLRNNIDIETWINTHIDTK--IHK 1399

Query: 647  NAKTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPE 468
            NAKTET NS                     QKK FFDW+GMNQERLY TISNLEPWFFPE
Sbjct: 1400 NAKTETTNS---------------------QKKYFFDWMGMNQERLYRTISNLEPWFFPE 1438

Query: 467  FVLLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENS 288
            FVLLFD YK  PWIIPIKLLIFHFHFYE NISQ+EKI++          NQK+YLEL NS
Sbjct: 1439 FVLLFDAYKKKPWIIPIKLLIFHFHFYE-NISQSEKIDI----------NQKKYLELANS 1487

Query: 287  XXXXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEKIF 108
                      GD VSDLRKQNKKK++EED TGADIKKGRKKK  + ++ +   F  +K F
Sbjct: 1488 NQKKNEQQGQGDLVSDLRKQNKKKDVEEDYTGADIKKGRKKKQSKSKKEAELEFFLKKYF 1547

Query: 107  SFSIK 93
             F ++
Sbjct: 1548 LFQLR 1552



 Score = 83.2 bits (204), Expect = 1e-12
 Identities = 40/62 (64%), Positives = 50/62 (80%)
 Frame = -3

Query: 229  KTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 50
            + K+K +++      +KK  +KKQ KSKKEAEL+FFLKKYFLFQLRWDD LNQR+INNI+
Sbjct: 1507 QNKKKDVEEDYTGADIKKGRKKKQSKSKKEAELEFFLKKYFLFQLRWDDPLNQRIINNIQ 1566

Query: 49   VY 44
            VY
Sbjct: 1567 VY 1568


>gb|AEX94034.1| hypothetical chloroplast RF19 (chloroplast) [Androstephium coeruleum]
          Length = 1805

 Score =  880 bits (2274), Expect = 0.0
 Identities = 456/610 (74%), Positives = 493/610 (80%), Gaps = 7/610 (1%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKR--SESKE 1728
            TI+IRS N VNENYSLIETKMKDLANKTITIR QIEGITK KKK+V  CDDK+  SES++
Sbjct: 989  TIQIRSMNYVNENYSLIETKMKDLANKTITIRAQIEGITKDKKKMVLICDDKKKKSESQK 1048

Query: 1727 DIWQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSIS 1548
             IWQ FKRKNIR+IRKSHYFMK F+EKIYM IL+YIIKIPR NAQ FFESTKKIINKSI 
Sbjct: 1049 GIWQSFKRKNIRLIRKSHYFMKSFIEKIYMKILIYIIKIPRTNAQFFFESTKKIINKSIY 1108

Query: 1547 NAETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLS 1368
              ET+QE +EKTN+NTMNFISTIK  FSN               CDLSSLSQAYVFYKLS
Sbjct: 1109 KDETSQERVEKTNKNTMNFISTIKKSFSN----TNISNKNSNIYCDLSSLSQAYVFYKLS 1164

Query: 1367 QNQLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRG 1188
            QNQL NKY+L SVLQYH TYPFLRDIIKNYCTTRGIFDSKPR KKIHKSGMNKWKNWL+G
Sbjct: 1165 QNQLFNKYHLISVLQYHGTYPFLRDIIKNYCTTRGIFDSKPRHKKIHKSGMNKWKNWLKG 1224

Query: 1187 HYQYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDS 1008
            HYQYNLSQT+W HL  KKWRN+VNQCRTIQKK+S KLDLYKKEKDQ IHY KQN YAVDS
Sbjct: 1225 HYQYNLSQTEWSHLTSKKWRNKVNQCRTIQKKNSTKLDLYKKEKDQSIHYMKQNDYAVDS 1284

Query: 1007 SISQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESF 828
             +SQKEK KK YGYDLLSYKYINYG+SK SYI  ST  LQVEDKKIPYNF  NT + ESF
Sbjct: 1285 LMSQKEKLKKRYGYDLLSYKYINYGDSK-SYIYEST--LQVEDKKIPYNF--NTLEPESF 1339

Query: 827  YRLISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHK 648
            Y LISI IS+YLEKRSIID DKN+DRKFF+CRILHFCLRNNIDIETW N H  TK  IHK
Sbjct: 1340 YGLISIAISNYLEKRSIIDTDKNLDRKFFNCRILHFCLRNNIDIETWTNRHIDTK--IHK 1397

Query: 647  NAKTETQNSQKFEKKDPFSFTIHHKIN-----PSNQKKSFFDWIGMNQERLYHTISNLEP 483
            N KTET+N Q  EKKD FSFTIH KIN     PSNQK  FFDW+GMNQE+LY TISNLEP
Sbjct: 1398 NVKTETKNFQNSEKKDIFSFTIHDKINLSNQKPSNQKSIFFDWMGMNQEKLYRTISNLEP 1457

Query: 482  WFFPEFVLLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYL 303
            WFFPEF+LLFD YKI PWIIPIK L FHFHFYE NISQ EKI VNKKKNL IL NQKEYL
Sbjct: 1458 WFFPEFLLLFDAYKIKPWIIPIKFLFFHFHFYE-NISQGEKIEVNKKKNLPILTNQKEYL 1516

Query: 302  ELENSXXXXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFL 123
            EL NS          GD VSDL++QNKKK++EED T  DIKKGRKKK  + ++ +   F 
Sbjct: 1517 ELANSNKKKNEEQGQGDLVSDLQEQNKKKDVEEDYTETDIKKGRKKKQTKSKKEAELNFF 1576

Query: 122  PEKIFSFSIK 93
             +K F F ++
Sbjct: 1577 LKKYFLFQLR 1586



 Score = 87.8 bits (216), Expect = 5e-14
 Identities = 42/64 (65%), Positives = 52/64 (81%)
 Frame = -3

Query: 235  ENKTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINN 56
            + + K+K +++   E  +KK  +KKQ KSKKEAEL+FFLKKYFLFQLRWD+ LNQRMINN
Sbjct: 1539 QEQNKKKDVEEDYTETDIKKGRKKKQTKSKKEAELNFFLKKYFLFQLRWDEPLNQRMINN 1598

Query: 55   IKVY 44
            IKVY
Sbjct: 1599 IKVY 1602


>gb|AEX94015.1| hypothetical chloroplast RF19 (chloroplast) [Doryanthes palmeri]
          Length = 1858

 Score =  880 bits (2275), Expect = 0.0
 Identities = 450/603 (74%), Positives = 494/603 (81%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDKRSESKEDI 1722
            TIRIRS N  NENYSLIETKMKD+ANKTITIRTQIE ITK KK+IV  C DKRSES++ I
Sbjct: 1030 TIRIRSMNWENENYSLIETKMKDIANKTITIRTQIERITKDKKRIVITCADKRSESQKYI 1089

Query: 1721 WQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSISNA 1542
            WQI KR NIR+IRK HYFMK F+EKIY+DILL  IKIPRI+AQLFFESTKKI+NKSI NA
Sbjct: 1090 WQILKRNNIRLIRKLHYFMKSFIEKIYIDILLCTIKIPRIHAQLFFESTKKILNKSIYNA 1149

Query: 1541 ETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLSQN 1362
            ETNQEGI+KTNQNTMNFISTIK  FSN               CDLS LSQAYVFYKLSQ 
Sbjct: 1150 ETNQEGIDKTNQNTMNFISTIKKCFSN----TNISNNNSNIYCDLSYLSQAYVFYKLSQT 1205

Query: 1361 QLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRGHY 1182
            QL+NKY+L+SVLQYH TYPFLR IIK+YCTTRGIFDSK R  KIHKSGMNKWKNWL+GHY
Sbjct: 1206 QLINKYHLRSVLQYHGTYPFLRGIIKDYCTTRGIFDSKSRHNKIHKSGMNKWKNWLKGHY 1265

Query: 1181 QYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDSSI 1002
            QYNLSQTKW  LVP+KWRNRVNQ RTIQ K S+KLDLYKKEK++LIHY KQN Y VDS +
Sbjct: 1266 QYNLSQTKWSQLVPQKWRNRVNQRRTIQNKGSIKLDLYKKEKEKLIHYVKQNDYVVDSLM 1325

Query: 1001 SQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESFYR 822
            +QKEK KKHYGYDLLSYKYI  G+ KDSYI GSTLQ+  EDKKIPYNF  NT K ESFY 
Sbjct: 1326 NQKEKLKKHYGYDLLSYKYIKNGDRKDSYIYGSTLQVN-EDKKIPYNF--NTLKPESFYG 1382

Query: 821  LISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHKNA 642
            L+SI I+DYLEK  IID DKN+DRK+FDCRILHFCLRNNIDIETW NTH  TK  I+KNA
Sbjct: 1383 LVSIAINDYLEKGYIIDTDKNLDRKYFDCRILHFCLRNNIDIETWTNTHIDTK--INKNA 1440

Query: 641  KTETQNSQKFEKKDPFSFTIHHKINPSNQKKSFFDWIGMNQERLYHTISNLEPWFFPEFV 462
            KTET N QK EKKD FSFTIHH+INPSNQKK FFDW+GMNQERLY TISNLEPWFFPEFV
Sbjct: 1441 KTETNNYQKIEKKDLFSFTIHHEINPSNQKKHFFDWMGMNQERLYRTISNLEPWFFPEFV 1500

Query: 461  LLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYLELENSXX 282
            LLFD YKI PWIIPIKLLIFHFH  E NISQ++KINVNKK+NL I +NQKEYLELENS  
Sbjct: 1501 LLFDAYKIKPWIIPIKLLIFHFHRNE-NISQSQKINVNKKRNLPISSNQKEYLELENSNK 1559

Query: 281  XXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFLPEKIFSF 102
                    GD VSDLRK+ KKK++EED  G+DIKKGRKKK  + ++ +   F  +K F F
Sbjct: 1560 KKNEQQDQGDLVSDLRKKKKKKDVEEDYAGSDIKKGRKKKQSKSKKEAELDFFLKKYFLF 1619

Query: 101  SIK 93
             +K
Sbjct: 1620 QLK 1622



 Score = 88.2 bits (217), Expect = 3e-14
 Identities = 43/62 (69%), Positives = 50/62 (80%)
 Frame = -3

Query: 229  KTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 50
            K K+K +++      +KK  +KKQ KSKKEAELDFFLKKYFLFQL+WDD LNQRMINNIK
Sbjct: 1577 KKKKKDVEEDYAGSDIKKGRKKKQSKSKKEAELDFFLKKYFLFQLKWDDPLNQRMINNIK 1636

Query: 49   VY 44
            VY
Sbjct: 1637 VY 1638


>ref|YP_009432531.1| hypothetical protein ycf1 (chloroplast) [Barnardia japonica]
 gb|ATB18787.1| hypothetical protein ycf1 (chloroplast) [Barnardia japonica]
          Length = 1825

 Score =  874 bits (2259), Expect = 0.0
 Identities = 458/610 (75%), Positives = 496/610 (81%), Gaps = 7/610 (1%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDK--RSESKE 1728
            TIRIRS N VNENYSLIETKMKDL NKTITIR QIEGI K KKKIV  CDDK  RSES++
Sbjct: 994  TIRIRSMNSVNENYSLIETKMKDLTNKTITIRAQIEGIKKDKKKIVITCDDKNKRSESQK 1053

Query: 1727 DIWQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSIS 1548
            DIW+IFKRKNIR+IRKSHYFMK F+EKIYMDILLYIIKIPR N QLFFESTKKIINKSI 
Sbjct: 1054 DIWKIFKRKNIRLIRKSHYFMKSFIEKIYMDILLYIIKIPRTNGQLFFESTKKIINKSIY 1113

Query: 1547 NAETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLS 1368
            N ET+QE +EKTNQNTMNFIS IK  FSN               CDLSSLSQAYVFYKLS
Sbjct: 1114 NDETSQEIVEKTNQNTMNFISNIKKSFSN----TNISNKNSNIYCDLSSLSQAYVFYKLS 1169

Query: 1367 QNQLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRG 1188
            QNQL  +Y+L+SVLQYH TYPFLRDIIKNYC TRGIFDS PR KKIHKS MNKW+NWL+G
Sbjct: 1170 QNQL--QYHLRSVLQYHGTYPFLRDIIKNYCMTRGIFDSNPRHKKIHKSRMNKWQNWLKG 1227

Query: 1187 HYQYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDSMKLDLYKKEKDQLIHYTKQNYYAVDS 1008
            HYQYNLSQTKW +LVPKKWRNRVNQCRTIQKKDSMKLD YKKEKD+LI+YTK+NYYA DS
Sbjct: 1228 HYQYNLSQTKWSYLVPKKWRNRVNQCRTIQKKDSMKLDFYKKEKDRLIYYTKKNYYAADS 1287

Query: 1007 SISQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSESF 828
             +SQKEK KKHY YDLLSYKYINYG+SKDSYI GST  LQV +KKIPYNF  NT + ESF
Sbjct: 1288 LMSQKEKLKKHYRYDLLSYKYINYGDSKDSYIYGST--LQVGNKKIPYNF--NTLEPESF 1343

Query: 827  YRLISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQIHK 648
            Y LISI IS+YLEK SIID DKN+DRKFFDCRI HFCLRNNIDI TWAN H  T+IQ  K
Sbjct: 1344 YGLISIAISNYLEKGSIIDTDKNLDRKFFDCRIPHFCLRNNIDIGTWANMHIDTRIQ--K 1401

Query: 647  NAKTETQNSQKFEKKDPFSFTIHHKINPSNQ-----KKSFFDWIGMNQERLYHTISNLEP 483
            N KTE +N QK EKKD FSFTIH KINPSNQ     KK FFDW+GMNQERLY TISNLEP
Sbjct: 1402 NGKTEIKNYQKCEKKDLFSFTIHQKINPSNQKPSNHKKYFFDWMGMNQERLYRTISNLEP 1461

Query: 482  WFFPEFVLLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKEYL 303
            WFFPEFVLLFD YKI PWIIPIKLLIFHFH  E NISQ++KI+  KKKNL ILANQKEYL
Sbjct: 1462 WFFPEFVLLFDAYKIKPWIIPIKLLIFHFHRNE-NISQSQKIDEKKKKNLPILANQKEYL 1520

Query: 302  ELENSXXXXXXXXXXGDFVSDLRKQNKKKNLEEDDTGADIKKGRKKKTIQEQERSRTGFL 123
            EL NS          GD VSDLRKQNKKK++EED T  DIKKG+KKK  + ++ +   F 
Sbjct: 1521 ELANS--NKNEQQRQGDLVSDLRKQNKKKDVEEDYTETDIKKGKKKKQSKSKKEAELDFF 1578

Query: 122  PEKIFSFSIK 93
             +K F F ++
Sbjct: 1579 LKKYFLFQLR 1588



 Score = 90.9 bits (224), Expect = 5e-15
 Identities = 44/62 (70%), Positives = 52/62 (83%)
 Frame = -3

Query: 229  KTKRKILKKMTREQTLKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIK 50
            + K+K +++   E  +KK ++KKQ KSKKEAELDFFLKKYFLFQLRWDD LNQRMINNIK
Sbjct: 1543 QNKKKDVEEDYTETDIKKGKKKKQSKSKKEAELDFFLKKYFLFQLRWDDPLNQRMINNIK 1602

Query: 49   VY 44
            VY
Sbjct: 1603 VY 1604


>ref|YP_009432783.1| hypothetical protein ycf1 (chloroplast) [Milla biflora]
 gb|ATB19039.1| hypothetical protein ycf1 (chloroplast) [Milla biflora]
          Length = 1828

 Score =  874 bits (2257), Expect = 0.0
 Identities = 455/614 (74%), Positives = 503/614 (81%), Gaps = 11/614 (1%)
 Frame = -2

Query: 1901 TIRIRSANCVNENYSLIETKMKDLANKTITIRTQIEGITKGKKKIVRACDDK--RSESKE 1728
            TIRIRS N VNENYSLIETKMKDLANKTITIR QIEGITK K K+V  CDDK  +SES++
Sbjct: 990  TIRIRSMNYVNENYSLIETKMKDLANKTITIRAQIEGITKDKNKMVLTCDDKNKKSESQK 1049

Query: 1727 DIWQIFKRKNIRVIRKSHYFMKYFVEKIYMDILLYIIKIPRINAQLFFESTKKIINKSIS 1548
             IWQ FKRKNIR+IRKSHYFMK F+ KIYMDIL+YIIKIPR NAQ FFESTKKIINKSI 
Sbjct: 1050 GIWQSFKRKNIRLIRKSHYFMKSFIGKIYMDILIYIIKIPRTNAQFFFESTKKIINKSIY 1109

Query: 1547 NAETNQEGIEKTNQNTMNFISTIKNPFSNFXXXXXXXXXXXXXNCDLSSLSQAYVFYKLS 1368
              +T+QEG++KTNQNTMNFISTIK  FSN               CDLSSLSQAYVFYKLS
Sbjct: 1110 KDKTSQEGVQKTNQNTMNFISTIKKSFSN----TNISNKNSNIYCDLSSLSQAYVFYKLS 1165

Query: 1367 QNQLLNKYNLKSVLQYHHTYPFLRDIIKNYCTTRGIFDSKPRQKKIHKSGMNKWKNWLRG 1188
            QN+LLNKY+L+SVLQYH TYPFLRDIIKNYCTTRGIF+SKPR KKIHKSGMNKWKNWL+G
Sbjct: 1166 QNKLLNKYHLRSVLQYHGTYPFLRDIIKNYCTTRGIFESKPRHKKIHKSGMNKWKNWLKG 1225

Query: 1187 HYQYNLSQTKWDHLVPKKWRNRVNQCRTIQKKDS--MKLDLYKKEKDQLIHYTKQNYYAV 1014
            HYQYNLSQT+W +L+PKKWRN VNQCRTIQKK+S  MKLDLYKKEKDQ IHY KQN YAV
Sbjct: 1226 HYQYNLSQTEWSYLIPKKWRNGVNQCRTIQKKNSMKMKLDLYKKEKDQSIHYMKQNDYAV 1285

Query: 1013 DSSISQKEKWKKHYGYDLLSYKYINYGNSKDSYISGSTLQLQVEDKKIPYNFNTNTQKSE 834
            DS ISQKEK KK YGYDLLSYKYINYG+SK SYI GST  LQV DKKIPYNF  NT + E
Sbjct: 1286 DSLISQKEKLKKRYGYDLLSYKYINYGDSK-SYIYGST--LQVGDKKIPYNF--NTLEPE 1340

Query: 833  SFYRLISIFISDYLEKRSIIDMDKNMDRKFFDCRILHFCLRNNIDIETWANTHTGTKIQI 654
            SFY LISI IS+YLEKRSI+D DKN+DRKFFD RILHFCLRNNIDIETW NTH  TK  I
Sbjct: 1341 SFYGLISIAISNYLEKRSIMDTDKNLDRKFFDYRILHFCLRNNIDIETWTNTHIDTK--I 1398

Query: 653  HKNAKTETQNSQKFEKKDPFSFTIHHKIN-----PSNQKKSFFDWIGMNQERLYHTISNL 489
            HKNAKTET+N Q  EKKD FSFTIH KIN     PS+QKK FFDW+GMNQE+LY TISNL
Sbjct: 1399 HKNAKTETKNFQNCEKKDLFSFTIHDKINLSNQKPSDQKKYFFDWMGMNQEKLYRTISNL 1458

Query: 488  EPWFFPEFVLLFDVYKINPWIIPIKLLIFHFHFYEKNISQNEKINVNKKKNLSILANQKE 309
            EPWFFPEF+LLFD YKI PWIIPIKLLIFHF+FYE NISQ+ KI VN+K+NL ILANQKE
Sbjct: 1459 EPWFFPEFLLLFDAYKIKPWIIPIKLLIFHFYFYE-NISQSAKIEVNQKRNLPILANQKE 1517

Query: 308  YLELENSXXXXXXXXXXGDFVSDLRKQNKKKNLEED--DTGADIKKGRKKKTIQEQERSR 135
            YLEL NS          GD VSDL+KQNKK+++EED  +T  +IK+GRKKK  + ++ + 
Sbjct: 1518 YLELANSNQKKNEEQGQGDLVSDLQKQNKKEDVEEDYTETDINIKRGRKKKETKSKKEAE 1577

Query: 134  TGFLPEKIFSFSIK 93
              F  +K F F ++
Sbjct: 1578 LNFFLKKYFLFQLR 1591



 Score = 79.7 bits (195), Expect = 1e-11
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = -3

Query: 184  LKKVERKKQFKSKKEAELDFFLKKYFLFQLRWDDSLNQRMINNIKVY 44
            +K+  +KK+ KSKKEAEL+FFLKKYFLFQLRWD  LNQRMINNIKVY
Sbjct: 1561 IKRGRKKKETKSKKEAELNFFLKKYFLFQLRWDGPLNQRMINNIKVY 1607