BLASTX nr result
ID: Ophiopogon24_contig00016194
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00016194
(472 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020251824.1| pentatricopeptide repeat-containing protein ... 132 1e-32
ref|XP_010933859.1| PREDICTED: pentatricopeptide repeat-containi... 73 6e-12
ref|XP_008810585.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 69 2e-10
gb|OVA12023.1| Smr protein/MutS2 C-terminal [Macleaya cordata] 63 2e-08
ref|XP_023734251.1| pentatricopeptide repeat-containing protein ... 61 9e-08
ref|XP_015955535.1| pentatricopeptide repeat-containing protein ... 58 8e-07
ref|XP_016189513.1| pentatricopeptide repeat-containing protein ... 58 8e-07
emb|CBI15289.3| unnamed protein product, partial [Vitis vinifera] 58 1e-06
ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_021665946.1| pentatricopeptide repeat-containing protein ... 56 3e-06
ref|XP_009413303.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_021665977.1| pentatricopeptide repeat-containing protein ... 56 4e-06
ref|XP_004299605.1| PREDICTED: pentatricopeptide repeat-containi... 56 5e-06
ref|XP_023905864.1| pentatricopeptide repeat-containing protein ... 55 7e-06
ref|XP_023905863.1| pentatricopeptide repeat-containing protein ... 55 7e-06
ref|XP_020548243.1| LOW QUALITY PROTEIN: pentatricopeptide repea... 55 9e-06
ref|XP_006439668.1| pentatricopeptide repeat-containing protein ... 55 9e-06
ref|XP_023915844.1| pentatricopeptide repeat-containing protein ... 55 9e-06
ref|XP_024170308.1| pentatricopeptide repeat-containing protein ... 55 9e-06
ref|XP_023915843.1| pentatricopeptide repeat-containing protein ... 55 9e-06
>ref|XP_020251824.1| pentatricopeptide repeat-containing protein At1g74750-like
[Asparagus officinalis]
ref|XP_020251825.1| pentatricopeptide repeat-containing protein At1g74750-like
[Asparagus officinalis]
ref|XP_020251826.1| pentatricopeptide repeat-containing protein At1g74750-like
[Asparagus officinalis]
gb|ONK81463.1| uncharacterized protein A4U43_C01F29350 [Asparagus officinalis]
Length = 854
Score = 132 bits (331), Expect = 1e-32
Identities = 82/155 (52%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Frame = +1
Query: 4 PGLKDAFGSVSSLSLQSRAYAVPAPRXXXXXXXXXXXXXXXXXNTDDAQAQQCGSANPSG 183
PGLKDAFG V+ LS Q+RA P+ +T +A Q C A S
Sbjct: 62 PGLKDAFGPVNYLSPQNRAVVGSGPQNRAVVGSGPHVKINSDGDTIEAP-QSC--AINSS 118
Query: 184 MTVQNFVKAGIATVGMLSELINYRIPAADGHGQ-LANPNCVISTGSPSPIPNTRSANGKS 360
M QNFVKAG+ATVGMLSELINYRIP AD H L+ N VI+ + P+ NTRS NGKS
Sbjct: 119 MATQNFVKAGVATVGMLSELINYRIPRADDHDDHLSTSNYVIN--NTPPVSNTRSNNGKS 176
Query: 361 RNHAKYSRVQASPSITTEERSTSNPTSAQNNPDAK 465
RN+AKYS+VQ S SI+TEERS SN + +QNN K
Sbjct: 177 RNNAKYSKVQPSSSISTEERSNSNSSPSQNNNGVK 211
>ref|XP_010933859.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
isoform X1 [Elaeis guineensis]
ref|XP_010933868.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
isoform X2 [Elaeis guineensis]
Length = 874
Score = 72.8 bits (177), Expect = 6e-12
Identities = 44/97 (45%), Positives = 56/97 (57%)
Frame = +1
Query: 178 SGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANPNCVISTGSPSPIPNTRSANGK 357
S +T + +VKAGIA+VGM SEL+NYRIPAA+ H A N V+ S P ++S+N K
Sbjct: 127 SKLTAERYVKAGIASVGMFSELVNYRIPAANQHVLFAPQNGVVD--STQPFTTSKSSNSK 184
Query: 358 SRNHAKYSRVQASPSITTEERSTSNPTSAQNNPDAKA 468
RN A R + + S S SN T AQN KA
Sbjct: 185 PRNRANNPRTEPNASANIVGGSNSNST-AQNGTGNKA 220
>ref|XP_008810585.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g74750-like [Phoenix dactylifera]
Length = 874
Score = 68.6 bits (166), Expect = 2e-10
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1
Query: 178 SGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANPNCVISTGSPSPIPNTRSANGK 357
S +T ++FVKAGIA+VG SEL+NYRI AA+ H A P+ ++ S P ++ +N K
Sbjct: 127 SKLTAEHFVKAGIASVGTFSELVNYRIQAANQHVLFAPPDGMVD--STQPFTASKFSNSK 184
Query: 358 SRNHAKYSRVQASPSITTEERSTSNPTSAQNNPDAKA 468
RN A R + + S T S+SN T AQN KA
Sbjct: 185 PRNRANNPRTEPNSSANTVGGSSSNST-AQNGAGNKA 220
>gb|OVA12023.1| Smr protein/MutS2 C-terminal [Macleaya cordata]
Length = 884
Score = 62.8 bits (151), Expect = 2e-08
Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Frame = +1
Query: 139 DDAQAQQCGSANPSGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQL-ANPNCVISTG 315
DD A + + S + + VKAGIA V +LS+L+NY+IP +DG L ++PN V+ T
Sbjct: 115 DDVYATKKDGVHSSALVSDHLVKAGIAAVNVLSDLVNYKIPFSDGKDILHSSPNSVVDT- 173
Query: 316 SPSPIPNTRSANGKSRNHAKYSRVQASPSITTEERSTSNPTSAQNNPDAKA 468
S I + RS+N K + +S V PS+ E S T + P KA
Sbjct: 174 -TSSISSIRSSNIKPQKRENFSMVNGKPSVQIGE---STSTVHCHGPKGKA 220
>ref|XP_023734251.1| pentatricopeptide repeat-containing protein At1g18900-like [Lactuca
sativa]
gb|PLY73469.1| hypothetical protein LSAT_4X106880 [Lactuca sativa]
Length = 796
Score = 60.8 bits (146), Expect = 9e-08
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Frame = +1
Query: 166 SANPSGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANPNCVISTGSPSP------ 327
S PSG+T +FV+AGIA V L++++NY+IP +G Q N V+ G P P
Sbjct: 95 SIQPSGLTTGHFVRAGIAAVNFLNDVVNYKIPMTEGSSQ----NYVVDHGRPIPNVKPYK 150
Query: 328 --IPNTRSANGKSRNHAKYSRVQASPSITTEERSTSNPTS-AQNNPDAK 465
IP +++ KS N Y +++ S + NPTS A++ P K
Sbjct: 151 KVIPEKTTSSDKSSNVKVYKKIEPQTS------AQKNPTSVAKSKPSGK 193
>ref|XP_015955535.1| pentatricopeptide repeat-containing protein At1g74750 [Arachis
duranensis]
Length = 877
Score = 58.2 bits (139), Expect = 8e-07
Identities = 32/99 (32%), Positives = 51/99 (51%)
Frame = +1
Query: 145 AQAQQCGSANPSGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANPNCVISTGSPS 324
A Q SA+ + + F +AGIA V LS+L+NY++P +DG G L+ ++
Sbjct: 119 ADGVQNHSAHSTPLNADQFYRAGIAAVNFLSDLVNYKLPISDGMGILSYSKNMVDPA--R 176
Query: 325 PIPNTRSANGKSRNHAKYSRVQASPSITTEERSTSNPTS 441
+PN RS+N + ++ V P ++T SN TS
Sbjct: 177 ALPNIRSSNVRQIRRENFTSVHPKPPVSTPIEQPSNHTS 215
>ref|XP_016189513.1| pentatricopeptide repeat-containing protein At1g74750 [Arachis
ipaensis]
Length = 878
Score = 58.2 bits (139), Expect = 8e-07
Identities = 32/99 (32%), Positives = 51/99 (51%)
Frame = +1
Query: 145 AQAQQCGSANPSGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANPNCVISTGSPS 324
A Q SA+ + + F +AGIA V LS+L+NY++P +DG G L+ ++
Sbjct: 119 ADGVQNHSAHSTPLNADQFYRAGIAAVNFLSDLVNYKLPISDGMGILSYSKNMVDPA--R 176
Query: 325 PIPNTRSANGKSRNHAKYSRVQASPSITTEERSTSNPTS 441
+PN RS+N + ++ V P ++T SN TS
Sbjct: 177 ALPNIRSSNVRQIRRENFTSVHPKPPVSTPIEQPSNHTS 215
>emb|CBI15289.3| unnamed protein product, partial [Vitis vinifera]
Length = 793
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +1
Query: 199 FVKAGIATVGMLSELINYRIPAADGHGQLANP-NCVISTGSPSPIPNTRSANGKSRNHAK 375
F++AGI V LS+L+NY+IP +DG G L P NC++ P+ +S N K K
Sbjct: 160 FIRAGIVAVNFLSDLVNYKIPMSDGSGMLKLPQNCMVD--PTKPLSKIKSTNIKPIRKGK 217
Query: 376 YSRVQA--SPSITTEERSTSNPTSAQNNPD 459
+S+V+A S +I STS+ S + D
Sbjct: 218 FSKVRAESSANIAAASNSTSSYHSTRGKGD 247
>ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
ref|XP_010663418.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
ref|XP_010663419.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
ref|XP_010663420.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +1
Query: 199 FVKAGIATVGMLSELINYRIPAADGHGQLANP-NCVISTGSPSPIPNTRSANGKSRNHAK 375
F++AGI V LS+L+NY+IP +DG G L P NC++ P+ +S N K K
Sbjct: 133 FIRAGIVAVNFLSDLVNYKIPMSDGSGMLKLPQNCMVD--PTKPLSKIKSTNIKPIRKGK 190
Query: 376 YSRVQA--SPSITTEERSTSNPTSAQNNPD 459
+S+V+A S +I STS+ S + D
Sbjct: 191 FSKVRAESSANIAAASNSTSSYHSTRGKGD 220
>ref|XP_021665946.1| pentatricopeptide repeat-containing protein At1g74750-like [Hevea
brasiliensis]
Length = 305
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/78 (38%), Positives = 43/78 (55%)
Frame = +1
Query: 169 ANPSGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANPNCVISTGSPSPIPNTRSA 348
A+PS FVKAGIAT+ LS+L+ Y+IP +DG G + NC++ P +S+
Sbjct: 123 AHPSRPISDQFVKAGIATISFLSDLVTYKIPISDGSGINSPKNCMVDPTRPH--STLKSS 180
Query: 349 NGKSRNHAKYSRVQASPS 402
N K +S+V PS
Sbjct: 181 NVKPIRRENFSKVYPKPS 198
>ref|XP_009413303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18900
[Musa acuminata subsp. malaccensis]
ref|XP_009413304.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18900
[Musa acuminata subsp. malaccensis]
Length = 866
Score = 56.6 bits (135), Expect = 3e-06
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Frame = +1
Query: 4 PGLKDAFGSVSSLSLQSRAYAVPAPRXXXXXXXXXXXXXXXXXNTDDAQAQQCGSA---- 171
P L++A GS+ + +SR PA NTD+ A S
Sbjct: 65 PCLQNAVGSI--IHQKSRCTG-PAQHVVSSSSSLRSDSSPPNRNTDNMNAGVRASGTDML 121
Query: 172 NPSGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANPNCVISTGSPSPIPNTRSAN 351
N S +T FVKAG+ATV M SEL++++ P + Q C+ + PS NT S+N
Sbjct: 122 NSSKLTAGRFVKAGMATVSMFSELVSHKTPGTEPGPQ----RCMADSTQPS--FNTISSN 175
Query: 352 GKSRNHAKYSRVQASPSIT-TEERSTSNPTSAQNNPDAK 465
KS N YS+ Q S ++ + S++ P+S+ P +
Sbjct: 176 DKSHNKPNYSKRQPSLNLVGVSDSSSTCPSSSVEKPSMR 214
>ref|XP_021665977.1| pentatricopeptide repeat-containing protein At1g18900-like [Hevea
brasiliensis]
Length = 873
Score = 56.2 bits (134), Expect = 4e-06
Identities = 30/78 (38%), Positives = 43/78 (55%)
Frame = +1
Query: 169 ANPSGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANPNCVISTGSPSPIPNTRSA 348
A+PS FVKAGIAT+ LS+L+ Y+IP +DG G + NC++ P +S+
Sbjct: 123 AHPSPPISDQFVKAGIATISFLSDLVTYKIPISDGSGINSPKNCMVDPTRPH--STLKSS 180
Query: 349 NGKSRNHAKYSRVQASPS 402
N K +S+V PS
Sbjct: 181 NVKPIRRENFSKVYPKPS 198
>ref|XP_004299605.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Fragaria vesca subsp. vesca]
Length = 879
Score = 55.8 bits (133), Expect = 5e-06
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Frame = +1
Query: 142 DAQAQQCGSANPSGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANPNCVISTGSP 321
DA + S+ P T + FVKAG+A V LS++++Y+IP +DG G L P + +
Sbjct: 121 DAIQKDISSSPP---TTEQFVKAGVAAVNFLSDIVSYKIPLSDGMGMLTLPKNTMVRPTV 177
Query: 322 SPIPNTRSANGKSRNHAKYSRVQASPSITTEERS--TSNPTSAQNNPD 459
+ + +S+N K N + V PS T S TSN ++ N D
Sbjct: 178 G-VSSVKSSNVKQINRENFISVHPKPSTETAAASERTSNHQGSKGNYD 224
>ref|XP_023905864.1| pentatricopeptide repeat-containing protein At1g74750-like isoform
X2 [Quercus suber]
gb|POF19236.1| pentatricopeptide repeat-containing protein [Quercus suber]
Length = 872
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 178 SGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANP-NCVISTGSPSPIPNTRSANG 354
S + FVKAGIA V LS+++NY+IP +DG+G L +P NC++ P+ +S+N
Sbjct: 126 SPLIADQFVKAGIAAVTFLSDMVNYKIPLSDGNGILNSPMNCMVD--PTRPLSGIKSSNV 183
Query: 355 KSRNHAKYSRVQASPS 402
+ +S V + PS
Sbjct: 184 RHIKRENFSSVHSKPS 199
>ref|XP_023905863.1| pentatricopeptide repeat-containing protein At1g74750-like isoform
X1 [Quercus suber]
Length = 879
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 178 SGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANP-NCVISTGSPSPIPNTRSANG 354
S + FVKAGIA V LS+++NY+IP +DG+G L +P NC++ P+ +S+N
Sbjct: 133 SPLIADQFVKAGIAAVTFLSDMVNYKIPLSDGNGILNSPMNCMVD--PTRPLSGIKSSNV 190
Query: 355 KSRNHAKYSRVQASPS 402
+ +S V + PS
Sbjct: 191 RHIKRENFSSVHSKPS 206
>ref|XP_020548243.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
At1g74750-like [Sesamum indicum]
Length = 856
Score = 55.1 bits (131), Expect = 9e-06
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Frame = +1
Query: 139 DDAQAQQCGSANPSGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLAN-PNCVISTG 315
DD A+ ++P FVKAG+A VG+LS+L+NYRIP DG + + N ++
Sbjct: 108 DDFDAKDIVHSSPP--IADQFVKAGMAAVGLLSDLVNYRIPMTDGSAMVTSLQNSMVD-- 163
Query: 316 SPSPIPNTRSAN----GKSRNHAKYSRVQASPSITTEERSTSN 432
PI N RSAN K +N+ K +S SI+ E+ ++
Sbjct: 164 PTKPISNVRSANMKTSRKDKNYDKXXXRSSSMSISYGEKGRAD 206
>ref|XP_006439668.1| pentatricopeptide repeat-containing protein At1g74750 [Citrus
clementina]
gb|ESR52908.1| hypothetical protein CICLE_v10018829mg [Citrus clementina]
Length = 856
Score = 55.1 bits (131), Expect = 9e-06
Identities = 33/89 (37%), Positives = 47/89 (52%)
Frame = +1
Query: 199 FVKAGIATVGMLSELINYRIPAADGHGQLANPNCVISTGSPSPIPNTRSANGKSRNHAKY 378
FVKAG+A V LS+L+NY++PA DG G AN P+ N + AN K+
Sbjct: 114 FVKAGVAAVSFLSDLVNYKLPALDGSG-TANSPTNFMVDPTRPLSNIKPANVKTIRRENV 172
Query: 379 SRVQASPSITTEERSTSNPTSAQNNPDAK 465
S+V P+ + E SNP++ +N K
Sbjct: 173 SKVY--PNSSAESTVGSNPSTGCHNAKDK 199
>ref|XP_023915844.1| pentatricopeptide repeat-containing protein At1g74750-like isoform
X2 [Quercus suber]
gb|POF06278.1| pentatricopeptide repeat-containing protein [Quercus suber]
Length = 872
Score = 55.1 bits (131), Expect = 9e-06
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 178 SGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANP-NCVISTGSPSPIPNTRSANG 354
S + FVKAGIA V LS+++NY+IP +DG+G L +P NC++ P+ +S+N
Sbjct: 126 SPLIADQFVKAGIAAVTFLSDMVNYKIPLSDGNGILNSPMNCMVD--PTRPLSGIKSSNV 183
Query: 355 KSRNHAKYSRVQASPS 402
+ +S V PS
Sbjct: 184 RHIKRENFSSVHTKPS 199
>ref|XP_024170308.1| pentatricopeptide repeat-containing protein At1g74750-like [Rosa
chinensis]
ref|XP_024170309.1| pentatricopeptide repeat-containing protein At1g74750-like [Rosa
chinensis]
gb|PRQ16085.1| putative Smr domain, tetratricopeptide-like helical
domain-containing protein [Rosa chinensis]
Length = 879
Score = 55.1 bits (131), Expect = 9e-06
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Frame = +1
Query: 178 SGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANPNCVISTGSPSPIPNTRSANGK 357
S + + FVKAG+A V LS++++Y+IP +DG G L+ P + S + + +S+N K
Sbjct: 130 SPLATEQFVKAGVAAVNFLSDIVSYKIPLSDGMGMLSLPKNTV-VRSTVGVSSVKSSNVK 188
Query: 358 SRNHAKYSRVQASPSITTEERS--TSNPTSAQNNPD 459
++ V PS S TSN +Q N D
Sbjct: 189 QIKKEHFTNVHPKPSTERAAASERTSNHQGSQGNVD 224
>ref|XP_023915843.1| pentatricopeptide repeat-containing protein At1g74750-like isoform
X1 [Quercus suber]
Length = 879
Score = 55.1 bits (131), Expect = 9e-06
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 178 SGMTVQNFVKAGIATVGMLSELINYRIPAADGHGQLANP-NCVISTGSPSPIPNTRSANG 354
S + FVKAGIA V LS+++NY+IP +DG+G L +P NC++ P+ +S+N
Sbjct: 133 SPLIADQFVKAGIAAVTFLSDMVNYKIPLSDGNGILNSPMNCMVD--PTRPLSGIKSSNV 190
Query: 355 KSRNHAKYSRVQASPS 402
+ +S V PS
Sbjct: 191 RHIKRENFSSVHTKPS 206