BLASTX nr result
ID: Ophiopogon24_contig00016128
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00016128
(438 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020250227.1| pre-mRNA-processing protein 40C [Asparagus o... 76 4e-13
ref|XP_020599395.1| pre-mRNA-processing protein 40C isoform X3 [... 68 3e-10
ref|XP_020599394.1| pre-mRNA-processing protein 40C isoform X2 [... 68 3e-10
ref|XP_020599393.1| pre-mRNA-processing protein 40C isoform X1 [... 68 3e-10
ref|XP_017696004.1| PREDICTED: pre-mRNA-processing protein 40C [... 64 8e-09
ref|XP_010906098.1| PREDICTED: pre-mRNA-processing protein 40C i... 64 8e-09
ref|XP_010906097.1| PREDICTED: pre-mRNA-processing protein 40C i... 64 8e-09
ref|XP_020686534.1| pre-mRNA-processing protein 40C isoform X2 [... 63 1e-08
ref|XP_020686530.1| pre-mRNA-processing protein 40C isoform X1 [... 63 1e-08
gb|OMO93899.1| hypothetical protein COLO4_16625 [Corchorus olito... 61 6e-08
gb|OMO60724.1| hypothetical protein CCACVL1_23916 [Corchorus cap... 61 7e-08
ref|XP_011463460.1| PREDICTED: pre-mRNA-processing protein 40C i... 60 9e-08
ref|XP_004297757.2| PREDICTED: pre-mRNA-processing protein 40C i... 60 9e-08
ref|XP_011463457.1| PREDICTED: pre-mRNA-processing protein 40C i... 60 9e-08
ref|XP_021292779.1| pre-mRNA-processing protein 40C [Herrania um... 60 1e-07
ref|XP_020094468.1| pre-mRNA-processing protein 40C isoform X3 [... 60 1e-07
gb|OAY63514.1| Pre-mRNA-processing protein 40C [Ananas comosus] 60 1e-07
ref|XP_020094467.1| pre-mRNA-processing protein 40C isoform X2 [... 60 1e-07
ref|XP_020094466.1| pre-mRNA-processing protein 40C isoform X1 [... 60 1e-07
gb|EOY01154.1| Pre-mRNA-processing protein 40C [Theobroma cacao] 60 2e-07
>ref|XP_020250227.1| pre-mRNA-processing protein 40C [Asparagus officinalis]
gb|ONK55246.1| uncharacterized protein A4U43_UnF6000 [Asparagus officinalis]
Length = 1105
Score = 75.9 bits (185), Expect = 4e-13
Identities = 37/51 (72%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYTD-MIRKQRAAADPKDRSEKEGRDKSSADI 289
K D RYSKMPRKERES W RY+D MIRK + AADPKD+S++ G+DKSSADI
Sbjct: 1043 KPDARYSKMPRKERESLWIRYSDDMIRKHKPAADPKDKSDRGGKDKSSADI 1093
>ref|XP_020599395.1| pre-mRNA-processing protein 40C isoform X3 [Phalaenopsis equestris]
Length = 949
Score = 67.8 bits (164), Expect = 3e-10
Identities = 30/50 (60%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYTD-MIRKQRAAADPKDRSEKEGRDKSSAD 292
K DPRYSKMPRK+RES W R+ D M+RKQ+A A+PKD+ + +G+++SS D
Sbjct: 886 KPDPRYSKMPRKDRESLWLRFADSMMRKQKAGAEPKDKFDSQGKNRSSTD 935
>ref|XP_020599394.1| pre-mRNA-processing protein 40C isoform X2 [Phalaenopsis equestris]
Length = 1121
Score = 67.8 bits (164), Expect = 3e-10
Identities = 30/50 (60%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYTD-MIRKQRAAADPKDRSEKEGRDKSSAD 292
K DPRYSKMPRK+RES W R+ D M+RKQ+A A+PKD+ + +G+++SS D
Sbjct: 1058 KPDPRYSKMPRKDRESLWLRFADSMMRKQKAGAEPKDKFDSQGKNRSSTD 1107
>ref|XP_020599393.1| pre-mRNA-processing protein 40C isoform X1 [Phalaenopsis equestris]
Length = 1122
Score = 67.8 bits (164), Expect = 3e-10
Identities = 30/50 (60%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYTD-MIRKQRAAADPKDRSEKEGRDKSSAD 292
K DPRYSKMPRK+RES W R+ D M+RKQ+A A+PKD+ + +G+++SS D
Sbjct: 1059 KPDPRYSKMPRKDRESLWLRFADSMMRKQKAGAEPKDKFDSQGKNRSSTD 1108
>ref|XP_017696004.1| PREDICTED: pre-mRNA-processing protein 40C [Phoenix dactylifera]
Length = 963
Score = 63.5 bits (153), Expect = 8e-09
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSAD 292
K DPRY KMP K+RE W RY DM+RKQ+AA+DPK++ + +GR+++S+D
Sbjct: 901 KPDPRYLKMPTKDREYLWHRYVEDMMRKQKAASDPKEKPDADGRNRTSSD 950
>ref|XP_010906098.1| PREDICTED: pre-mRNA-processing protein 40C isoform X1 [Elaeis
guineensis]
Length = 1066
Score = 63.5 bits (153), Expect = 8e-09
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSAD 292
K DPRYSKMP K+RE W RY DM+RKQ+ A+DPK++ + +GR+++S+D
Sbjct: 1004 KPDPRYSKMPGKDREYLWRRYAEDMMRKQKPASDPKEKPDTDGRNRTSSD 1053
>ref|XP_010906097.1| PREDICTED: pre-mRNA-processing protein 40C isoform X2 [Elaeis
guineensis]
Length = 1097
Score = 63.5 bits (153), Expect = 8e-09
Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSAD 292
K DPRYSKMP K+RE W RY DM+RKQ+ A+DPK++ + +GR+++S+D
Sbjct: 1035 KPDPRYSKMPGKDREYLWRRYAEDMMRKQKPASDPKEKPDTDGRNRTSSD 1084
>ref|XP_020686534.1| pre-mRNA-processing protein 40C isoform X2 [Dendrobium catenatum]
Length = 949
Score = 62.8 bits (151), Expect = 1e-08
Identities = 28/50 (56%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSAD 292
K DPRYSKMPRK+RE+ W RY D++RKQ++ AD K++ EG+++S AD
Sbjct: 887 KPDPRYSKMPRKDREALWLRYVEDLMRKQKSGADTKEKFNSEGKNRSPAD 936
>ref|XP_020686530.1| pre-mRNA-processing protein 40C isoform X1 [Dendrobium catenatum]
ref|XP_020686532.1| pre-mRNA-processing protein 40C isoform X1 [Dendrobium catenatum]
ref|XP_020686533.1| pre-mRNA-processing protein 40C isoform X1 [Dendrobium catenatum]
gb|PKU73342.1| Pre-mRNA-processing protein 40C [Dendrobium catenatum]
Length = 1130
Score = 62.8 bits (151), Expect = 1e-08
Identities = 28/50 (56%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSAD 292
K DPRYSKMPRK+RE+ W RY D++RKQ++ AD K++ EG+++S AD
Sbjct: 1068 KPDPRYSKMPRKDREALWLRYVEDLMRKQKSGADTKEKFNSEGKNRSPAD 1117
>gb|OMO93899.1| hypothetical protein COLO4_16625 [Corchorus olitorius]
Length = 631
Score = 60.8 bits (146), Expect = 6e-08
Identities = 27/51 (52%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSADI 289
KSDPRY+KMPRKERE+ W RY DM+RKQ++A+D + + + +SS D+
Sbjct: 521 KSDPRYNKMPRKEREAVWRRYAEDMLRKQKSASDQGEEKHTDSKGRSSGDL 571
>gb|OMO60724.1| hypothetical protein CCACVL1_23916 [Corchorus capsularis]
Length = 896
Score = 60.8 bits (146), Expect = 7e-08
Identities = 27/51 (52%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSADI 289
KSDPRY+KMPRKERE+ W RY DM+RKQ++A+D + + + +SS D+
Sbjct: 832 KSDPRYNKMPRKEREAVWRRYAEDMLRKQKSASDQGEEKHTDSKGRSSGDL 882
>ref|XP_011463460.1| PREDICTED: pre-mRNA-processing protein 40C isoform X3 [Fragaria
vesca subsp. vesca]
Length = 887
Score = 60.5 bits (145), Expect = 9e-08
Identities = 26/50 (52%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSAD 292
KSDPRY+KMPRK+RE W RY +M+RKQ+++ DP++ + + + +SSAD
Sbjct: 823 KSDPRYNKMPRKDREVVWHRYAEEMLRKQKSSLDPREDRKSDAKSRSSAD 872
>ref|XP_004297757.2| PREDICTED: pre-mRNA-processing protein 40C isoform X2 [Fragaria
vesca subsp. vesca]
Length = 902
Score = 60.5 bits (145), Expect = 9e-08
Identities = 26/50 (52%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSAD 292
KSDPRY+KMPRK+RE W RY +M+RKQ+++ DP++ + + + +SSAD
Sbjct: 838 KSDPRYNKMPRKDREVVWHRYAEEMLRKQKSSLDPREDRKSDAKSRSSAD 887
>ref|XP_011463457.1| PREDICTED: pre-mRNA-processing protein 40C isoform X1 [Fragaria
vesca subsp. vesca]
ref|XP_011463458.1| PREDICTED: pre-mRNA-processing protein 40C isoform X1 [Fragaria
vesca subsp. vesca]
ref|XP_011463459.1| PREDICTED: pre-mRNA-processing protein 40C isoform X1 [Fragaria
vesca subsp. vesca]
Length = 903
Score = 60.5 bits (145), Expect = 9e-08
Identities = 26/50 (52%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSAD 292
KSDPRY+KMPRK+RE W RY +M+RKQ+++ DP++ + + + +SSAD
Sbjct: 839 KSDPRYNKMPRKDREVVWHRYAEEMLRKQKSSLDPREDRKSDAKSRSSAD 888
>ref|XP_021292779.1| pre-mRNA-processing protein 40C [Herrania umbratica]
Length = 815
Score = 60.1 bits (144), Expect = 1e-07
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSADI 289
K DPRYSKMPRKERE+ W RY DM+RKQ+ A D ++ + + +SS D+
Sbjct: 751 KPDPRYSKMPRKEREALWRRYAEDMLRKQKVALDQEEEKRTDAKGRSSGDL 801
>ref|XP_020094468.1| pre-mRNA-processing protein 40C isoform X3 [Ananas comosus]
Length = 901
Score = 60.1 bits (144), Expect = 1e-07
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSAD 292
K DPRYSK+P K+RES W RY DMIRKQ+ +D K++ + GR+++S D
Sbjct: 843 KPDPRYSKLPSKDRESIWRRYADDMIRKQKQKSDSKEKPDTNGRNRTSTD 892
>gb|OAY63514.1| Pre-mRNA-processing protein 40C [Ananas comosus]
Length = 1054
Score = 60.1 bits (144), Expect = 1e-07
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSAD 292
K DPRYSK+P K+RES W RY DMIRKQ+ +D K++ + GR+++S D
Sbjct: 968 KPDPRYSKLPSKDRESIWRRYADDMIRKQKQKSDSKEKPDTNGRNRTSTD 1017
>ref|XP_020094467.1| pre-mRNA-processing protein 40C isoform X2 [Ananas comosus]
Length = 1082
Score = 60.1 bits (144), Expect = 1e-07
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSAD 292
K DPRYSK+P K+RES W RY DMIRKQ+ +D K++ + GR+++S D
Sbjct: 1024 KPDPRYSKLPSKDRESIWRRYADDMIRKQKQKSDSKEKPDTNGRNRTSTD 1073
>ref|XP_020094466.1| pre-mRNA-processing protein 40C isoform X1 [Ananas comosus]
Length = 1085
Score = 60.1 bits (144), Expect = 1e-07
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSAD 292
K DPRYSK+P K+RES W RY DMIRKQ+ +D K++ + GR+++S D
Sbjct: 1027 KPDPRYSKLPSKDRESIWRRYADDMIRKQKQKSDSKEKPDTNGRNRTSTD 1076
>gb|EOY01154.1| Pre-mRNA-processing protein 40C [Theobroma cacao]
Length = 816
Score = 59.7 bits (143), Expect = 2e-07
Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = -1
Query: 438 KSDPRYSKMPRKERESHWSRYT-DMIRKQRAAADPKDRSEKEGRDKSSADI 289
K DPRYSKMPRKERE+ W RY DM+RKQ++A D ++ + + +SS D+
Sbjct: 752 KPDPRYSKMPRKEREALWRRYAEDMLRKQKSALDQEEEKRTDAKVRSSGDL 802