BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00015997
         (765 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020264840.1| protein RTF1 homolog [Asparagus officinalis]...   253   2e-76
ref|XP_020584969.1| protein RTF1 homolog [Phalaenopsis equestris...   200   3e-56
ref|XP_020705849.1| protein RTF1 homolog [Dendrobium catenatum] ...   197   2e-55
gb|PKA64655.1| hypothetical protein AXF42_Ash007402 [Apostasia s...   194   6e-54
ref|XP_019704985.1| PREDICTED: protein RTF1 homolog [Elaeis guin...   170   4e-45
ref|XP_009399689.1| PREDICTED: protein RTF1 homolog [Musa acumin...   170   4e-45
ref|XP_008783248.1| PREDICTED: protein RTF1 homolog [Phoenix dac...   167   5e-44
ref|XP_010925891.1| PREDICTED: protein RTF1 homolog [Elaeis guin...   164   8e-43
ref|XP_008801861.1| PREDICTED: protein RTF1 homolog [Phoenix dac...   161   5e-42
ref|XP_020101316.1| protein RTF1 homolog [Ananas comosus]             151   3e-38
gb|PKA58442.1| hypothetical protein AXF42_Ash013948 [Apostasia s...   128   4e-30
ref|XP_020679180.1| protein RTF1 homolog [Dendrobium catenatum]       119   9e-29
ref|XP_010057458.1| PREDICTED: protein RTF1 homolog [Eucalyptus ...   117   4e-26
gb|OUZ99889.1| hypothetical protein BVC80_8597g8 [Macleaya cordata]   112   6e-26
gb|OVA19610.1| Plus-3 [Macleaya cordata]                              112   1e-24
ref|XP_019073959.1| PREDICTED: protein RTF1 homolog [Vitis vinif...   111   4e-24
gb|KMZ66252.1| putative RNA polymerase-associated protein RTF1 [...   110   1e-23
gb|EMS56445.1| RNA polymerase-associated protein RTF1-like prote...   109   2e-23
dbj|BAJ96429.1| predicted protein [Hordeum vulgare subsp. vulgare]    108   3e-23
ref|XP_017235989.1| PREDICTED: protein RTF1 homolog [Daucus caro...   106   2e-22

>ref|XP_020264840.1| protein RTF1 homolog [Asparagus officinalis]
 ref|XP_020264841.1| protein RTF1 homolog [Asparagus officinalis]
 gb|ONK68158.1| uncharacterized protein A4U43_C05F8110 [Asparagus officinalis]
          Length = 656

 Score =  253 bits (646), Expect = 2e-76
 Identities = 147/258 (56%), Positives = 158/258 (61%), Gaps = 3/258 (1%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXXNPKFS-KRKHPGSQVPLKKRFD 177
           GRTG S+S R+NQSR HS+W+R+               NPKFS K+KH  SQVPLKKRFD
Sbjct: 13  GRTGGSSS-RKNQSRPHSKWRRDDVYSDGSDSNDDDSDNPKFSSKKKHSSSQVPLKKRFD 71

Query: 178 PPEXXXXXXXXXXXXXXXXXXXXXXS--APSIGSDLYXXXXXXXXLGKMSELDREMILAE 351
           PPE                      S  APS+GSDLY        L KMSELDREMILAE
Sbjct: 72  PPEKDKRGNWGGVDDDDDGRLSGDDSDSAPSVGSDLYKDEEDKEELEKMSELDREMILAE 131

Query: 352 RSTKIDDYRLKKKARETSSKVDMKARKEXXXXXXXXXXXXXDKPASKSDALNELRAKRMK 531
           RSTKIDDYRLKKKARETSSKV+MK RKE             DKPA+KSDALNELRAKRMK
Sbjct: 132 RSTKIDDYRLKKKARETSSKVEMKTRKESPPPLRGRPSLRSDKPAAKSDALNELRAKRMK 191

Query: 532 QQDPEGYRRMRDTPGGVGFGTKDSSPAKLRSVPLPTLXXXXXXXXXXXXXXXXXXXXNEM 711
           QQD EGYR+ RD  G V F  KDSSPAK RS P+PTL                    NEM
Sbjct: 192 QQDLEGYRKQRDAAGSVSFSNKDSSPAKYRSFPMPTLDSSDSEGESKGDGKDKSPEDNEM 251

Query: 712 DSSEDITVSKSDTLKYED 765
           DS EDIT SKSDTLKYED
Sbjct: 252 DSLEDITGSKSDTLKYED 269


>ref|XP_020584969.1| protein RTF1 homolog [Phalaenopsis equestris]
 ref|XP_020584970.1| protein RTF1 homolog [Phalaenopsis equestris]
 ref|XP_020584972.1| protein RTF1 homolog [Phalaenopsis equestris]
          Length = 657

 Score =  200 bits (508), Expect = 3e-56
 Identities = 123/262 (46%), Positives = 152/262 (58%), Gaps = 7/262 (2%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXXNPKFSKRKHPGSQVPLKKRFDP 180
           GRTG  TS R+NQS  HSRW+RE               N  F+KR+H GSQVPLKKR DP
Sbjct: 13  GRTG--TSSRKNQSHPHSRWRREGSYSDGSDSKEDDSDNSNFNKRRHAGSQVPLKKRLDP 70

Query: 181 PEXXXXXXXXXXXXXXXXXXXXXXSAPSIGSDLYXXXXXXXXLGKMSELDREMILAERST 360
           PE                      SAPS+GSDLY        LGK+SELDREMILAERST
Sbjct: 71  PEKDKRSNWVDDHDDRLSGDDSD-SAPSVGSDLYRDEADKEELGKLSELDREMILAERST 129

Query: 361 KIDDYRLKKKARETSSKVDMKARKE--XXXXXXXXXXXXXDKPASKSDALNELRAKRMKQ 534
           KIDDYRLKKKAR +S+K++ K+RKE               ++ A+K+DALNELRAKRM+Q
Sbjct: 130 KIDDYRLKKKARASSTKME-KSRKESPPPLPSRGRSSVRTERTAAKTDALNELRAKRMRQ 188

Query: 535 QDPEGYRRMRDTPG--GVGFGTKDSSPAKLRSVPLPTLXXXXXXXXXXXXXXXXXXXXNE 708
           QDPEGYRR+RD+ G  G  FG +D SP K RS+ +P L                    ++
Sbjct: 189 QDPEGYRRLRDSGGVTGSAFGNRDPSP-KRRSISIPALDSSDSDDEGTSVEGKEDKLADD 247

Query: 709 M---DSSEDITVSKSDTLKYED 765
           +   D+ ED+  SKS+ ++YED
Sbjct: 248 VDMGDNLEDLLTSKSEPIRYED 269


>ref|XP_020705849.1| protein RTF1 homolog [Dendrobium catenatum]
 ref|XP_020705850.1| protein RTF1 homolog [Dendrobium catenatum]
 ref|XP_020705851.1| protein RTF1 homolog [Dendrobium catenatum]
 ref|XP_020705852.1| protein RTF1 homolog [Dendrobium catenatum]
 ref|XP_020705853.1| protein RTF1 homolog [Dendrobium catenatum]
 ref|XP_020705854.1| protein RTF1 homolog [Dendrobium catenatum]
 gb|PKU61922.1| hypothetical protein MA16_Dca017255 [Dendrobium catenatum]
          Length = 658

 Score =  197 bits (502), Expect = 2e-55
 Identities = 120/262 (45%), Positives = 150/262 (57%), Gaps = 7/262 (2%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXXNPKFSKRKHPGSQVPLKKRFDP 180
           GRTG  TS R+NQS  HSRW+R+               + KF+KR+H GSQVPLKKR DP
Sbjct: 13  GRTG--TSSRKNQSHPHSRWRRDESFSDGSDSKEDDSDSSKFNKRRHSGSQVPLKKRLDP 70

Query: 181 PEXXXXXXXXXXXXXXXXXXXXXXSAPSIGSDLYXXXXXXXXLGKMSELDREMILAERST 360
           PE                      SAPS+GSDLY        LGK++ELDREMILAERST
Sbjct: 71  PEKDKRSNWVDDHDDRLSGDDSD-SAPSVGSDLYRDEADKEELGKLTELDREMILAERST 129

Query: 361 KIDDYRLKKKARETSSKVDMKARKE--XXXXXXXXXXXXXDKPASKSDALNELRAKRMKQ 534
           KIDDYRLKKKAR +S+ ++ K+RKE               +K  +K+DALNELRAKRM+Q
Sbjct: 130 KIDDYRLKKKARASSTNLE-KSRKESPPPLSSRGRSSVRTEKTGAKTDALNELRAKRMRQ 188

Query: 535 QDPEGYRRMRDTPGGVG--FGTKDSSPAKLRSVPLPTLXXXXXXXXXXXXXXXXXXXXNE 708
           QDPEGYRR+RD+ G  G  FG +D SP K RS+ +P L                     +
Sbjct: 189 QDPEGYRRLRDSGGMTGSTFGNRDPSPPKHRSLSIPALDSSDSDDEGTSVDGKEDKIPED 248

Query: 709 M---DSSEDITVSKSDTLKYED 765
           +   D+ ED+  SKS+ ++YED
Sbjct: 249 VDIGDNLEDLLTSKSEPIRYED 270


>gb|PKA64655.1| hypothetical protein AXF42_Ash007402 [Apostasia shenzhenica]
          Length = 658

 Score =  194 bits (492), Expect = 6e-54
 Identities = 120/262 (45%), Positives = 148/262 (56%), Gaps = 7/262 (2%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXXNPKFSKRKHPGSQVPLKKRFDP 180
           GRTG  TS RRNQSR HSRW+RE                 KF+KR+H G QVPLKKRF+P
Sbjct: 13  GRTG--TSARRNQSRPHSRWRREGSYSDGSDSKEDDLGKSKFNKRRHSGPQVPLKKRFEP 70

Query: 181 PEXXXXXXXXXXXXXXXXXXXXXXSAPSIGSDLYXXXXXXXXLGKMSELDREMILAERST 360
           PE                      SAPS+GSDLY        LGKMSELDREMILAERST
Sbjct: 71  PEKDKRSNWLDDHDDRLSGDDSD-SAPSVGSDLYKDEADKEALGKMSELDREMILAERST 129

Query: 361 KIDDYRLKKKARETSSKVDMKARKE--XXXXXXXXXXXXXDKPASKSDALNELRAKRMKQ 534
           KIDDYRLKKKAR +S++   K+ KE               DK  +K+DALNELRAKRM+Q
Sbjct: 130 KIDDYRLKKKARASSTRAG-KSTKESPPPFPSRSRSSVRTDKTGAKTDALNELRAKRMRQ 188

Query: 535 QDPEGYRRMRDTPGGVG--FGTKDSSPAKLRSVPLPTLXXXXXXXXXXXXXXXXXXXXNE 708
           QD EGYRR +D+ G +G  FG ++SS +K RS+ +P L                     +
Sbjct: 189 QDAEGYRRSKDSVGVIGSSFGIRESSSSKPRSLTIPALDSSDSDDEGISADGKHEKSPED 248

Query: 709 M---DSSEDITVSKSDTLKYED 765
           +   D+ ED+  SK++ ++YED
Sbjct: 249 IDIGDNLEDVLTSKTEPIRYED 270


>ref|XP_019704985.1| PREDICTED: protein RTF1 homolog [Elaeis guineensis]
          Length = 657

 Score =  170 bits (430), Expect = 4e-45
 Identities = 123/266 (46%), Positives = 146/266 (54%), Gaps = 11/266 (4%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQ-SRSHSRWQREXXXXXXXXXXXXXXXNPKFSKRKHPGSQVPLKKRFD 177
           GRTG+S  GR+N  SR  SRW+RE               NP+++KRK  GSQVPLKKR D
Sbjct: 13  GRTGAS--GRKNSHSRPQSRWRREGSFSDGSDSKDDDSDNPRYNKRKSAGSQVPLKKRLD 70

Query: 178 PPEXXXXXXXXXXXXXXXXXXXXXXS--APSIGSDLYXXXXXXXXLGKMSELDREMILAE 351
           PPE                      S  APS+GSDLY        LGKMSELDRE+ILAE
Sbjct: 71  PPEKDKRNGWGDDDDDDDDRHSSDDSDSAPSVGSDLYRDEADKEELGKMSELDRELILAE 130

Query: 352 RSTKIDDYRLKKKARETSSKVDMKARKE--XXXXXXXXXXXXXDKPASKSDALNELRAKR 525
           RSTKIDDY+LKK AR  SSK+D K+RKE               D+ A+KS ALNELRAKR
Sbjct: 131 RSTKIDDYKLKKMAR-ASSKID-KSRKESPPPLPYRSRSSARTDRTAAKS-ALNELRAKR 187

Query: 526 MKQQDPEGYR-RMRDT--PGGVGFGTKDSSPAKLRSVPLP--TLXXXXXXXXXXXXXXXX 690
           M+QQDPEGYR R +D    GG G G +DSSP++ RSV  P   L                
Sbjct: 188 MRQQDPEGYRSRFKDAAGEGGGGAGNQDSSPSRHRSVASPPSDLSNDRENGGRTDSEDER 247

Query: 691 XXXXNEM-DSSEDITVSKSDTLKYED 765
               N++ D   D + S+ D LK+ED
Sbjct: 248 FPGNNKIEDDLLDDSPSRLDPLKFED 273


>ref|XP_009399689.1| PREDICTED: protein RTF1 homolog [Musa acuminata subsp. malaccensis]
 ref|XP_009399697.1| PREDICTED: protein RTF1 homolog [Musa acuminata subsp. malaccensis]
 ref|XP_009399705.1| PREDICTED: protein RTF1 homolog [Musa acuminata subsp. malaccensis]
 ref|XP_018685743.1| PREDICTED: protein RTF1 homolog [Musa acuminata subsp. malaccensis]
          Length = 666

 Score =  170 bits (430), Expect = 4e-45
 Identities = 119/271 (43%), Positives = 145/271 (53%), Gaps = 16/271 (5%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXXNPKFSKRKHPGSQVPLKKRFDP 180
           GRTGS    + N SR  SRW+R+               +PK++KRK  GSQVPLKKRFDP
Sbjct: 13  GRTGSGQ--KNNNSRPQSRWKRDNSYSDGSDSRDDDSDDPKYTKRKPSGSQVPLKKRFDP 70

Query: 181 PEXXXXXXXXXXXXXXXXXXXXXX---SAPSIGSDLYXXXXXXXXLGKMSELDREMILAE 351
           PE                         SAPS+GSDLY        LGKMSELDREMILAE
Sbjct: 71  PEKDKRGGWRDGDNDDGGGRHSDDDSDSAPSVGSDLYKDDADKEELGKMSELDREMILAE 130

Query: 352 RSTKIDDYRLKKKARETSSKVDMKARKEXXXXXXXXXXXXX--DKPASKSDALNELRAKR 525
           RSTKIDDY+LKK AR +SSK++ K+RKE               D+ A+KS ALNELRAKR
Sbjct: 131 RSTKIDDYKLKKMARASSSKME-KSRKERSPPLPIRGRSSAQNDRTAAKS-ALNELRAKR 188

Query: 526 MKQQDPEGYR-RMRDTPGG---VGFGTKDSSPAKLRSV-----PLPTLXXXXXXXXXXXX 678
           M+QQDPEGYR R+RD  G     GF  +DSSP+K R++     P   +            
Sbjct: 189 MRQQDPEGYRSRLRDLTGEGAIGGFTLRDSSPSKRRNLGMAASPPSDISNEGESGGRADS 248

Query: 679 XXXXXXXXNEMDSS--EDITVSKSDTLKYED 765
                    +MD    ED++ S+ D  K+ED
Sbjct: 249 DDDRFHEDKKMDDDLLEDLSPSRLDAPKFED 279


>ref|XP_008783248.1| PREDICTED: protein RTF1 homolog [Phoenix dactylifera]
 ref|XP_008783249.1| PREDICTED: protein RTF1 homolog [Phoenix dactylifera]
 ref|XP_017697139.1| PREDICTED: protein RTF1 homolog [Phoenix dactylifera]
          Length = 656

 Score =  167 bits (422), Expect = 5e-44
 Identities = 119/265 (44%), Positives = 143/265 (53%), Gaps = 10/265 (3%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQ-SRSHSRWQREXXXXXXXXXXXXXXXNPKFSKRKHPGSQVPLKKRFD 177
           GR G+S  GR+N  SR  SRW+RE               +P+++KRK  GSQVPLKKR D
Sbjct: 13  GRMGAS--GRKNSHSRPQSRWRREGSFSDGSDSKDDDSDSPRYNKRKSAGSQVPLKKRLD 70

Query: 178 PPEXXXXXXXXXXXXXXXXXXXXXXSAPSIGSDLYXXXXXXXXLGKMSELDREMILAERS 357
           PPE                      SAPS+GSDLY        LGKMSELDRE+ILAERS
Sbjct: 71  PPEKDKRSGWGDDDDDDRHSSDESDSAPSVGSDLYRDEADKEELGKMSELDRELILAERS 130

Query: 358 TKIDDYRLKKKARETSSKVDMKARK--EXXXXXXXXXXXXXDKPASKSDALNELRAKRMK 531
           TKIDDY+LKK AR  SSK+D K+RK                D+ A+KS ALNELRAKRM+
Sbjct: 131 TKIDDYKLKKMAR-ASSKID-KSRKVSPPPLPYRSRSSVRTDRTAAKS-ALNELRAKRMR 187

Query: 532 QQDPEGYR-RMRDTP---GGVGFGTKDSSPAK--LRSVPLPTLXXXXXXXXXXXXXXXXX 693
           QQDPEGYR R +D     GG G G +DSSP+K  L + P   L                 
Sbjct: 188 QQDPEGYRSRFKDAAGEGGGAGAGNQDSSPSKHRLAASPPSDLSNERENGGRTDSEDERF 247

Query: 694 XXXNEM-DSSEDITVSKSDTLKYED 765
              N++ D   D + S+ D LK+ED
Sbjct: 248 PGNNKIEDDLLDDSPSRLDPLKFED 272


>ref|XP_010925891.1| PREDICTED: protein RTF1 homolog [Elaeis guineensis]
 ref|XP_010925893.1| PREDICTED: protein RTF1 homolog [Elaeis guineensis]
 ref|XP_010925895.1| PREDICTED: protein RTF1 homolog [Elaeis guineensis]
          Length = 663

 Score =  164 bits (414), Expect = 8e-43
 Identities = 121/271 (44%), Positives = 142/271 (52%), Gaps = 16/271 (5%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQ-SRSHSRWQREXXXXXXXXXXXXXXXNPKFSKRKHPGSQVPLKKRFD 177
           GRTG  TSGR+N  SR  SRW+RE               NP+++KRK  GSQVPLKKR D
Sbjct: 13  GRTG--TSGRKNNHSRPQSRWRREGSYSDGSDSKDDDSDNPRYNKRKPAGSQVPLKKRLD 70

Query: 178 PPE------XXXXXXXXXXXXXXXXXXXXXXSAPSIGSDLYXXXXXXXXLGKMSELDREM 339
           PPE                            SAPS+GSDLY        LGKMSELDRE+
Sbjct: 71  PPEKDKSSGWGDDDEDDDDDDDDRQSDDESDSAPSVGSDLYRDEADKEELGKMSELDREL 130

Query: 340 ILAERSTKIDDYRLKKKARETSSKVDMKARKE--XXXXXXXXXXXXXDKPASKSDALNEL 513
           ILAERSTKIDDY+LKK AR +S+K++ K+RKE               D+ A+KS AL+EL
Sbjct: 131 ILAERSTKIDDYKLKKMARASSAKME-KSRKESPPPLPNRSRSSARIDRTAAKS-ALDEL 188

Query: 514 RAKRMKQQDPEGYR-RMRDT---PGGVGFGTKDSSPAKLRSVPLP--TLXXXXXXXXXXX 675
           RAKRMKQQ PEGYR R +D     G VG G +D SP K RS   P   L           
Sbjct: 189 RAKRMKQQAPEGYRGRFKDAVGDGGSVGAGHQDMSPPKHRSAASPPSDLSNEHESGGRMD 248

Query: 676 XXXXXXXXXNEM-DSSEDITVSKSDTLKYED 765
                    N M D   D + S+ D LK+ED
Sbjct: 249 SEDERFPGNNRMEDDLLDDSPSRLDPLKFED 279


>ref|XP_008801861.1| PREDICTED: protein RTF1 homolog [Phoenix dactylifera]
 ref|XP_008801934.1| PREDICTED: protein RTF1 homolog [Phoenix dactylifera]
 ref|XP_008802085.1| PREDICTED: protein RTF1 homolog [Phoenix dactylifera]
 ref|XP_017696786.1| PREDICTED: protein RTF1 homolog [Phoenix dactylifera]
 ref|XP_017696788.1| PREDICTED: protein RTF1 homolog [Phoenix dactylifera]
 ref|XP_017696789.1| PREDICTED: protein RTF1 homolog [Phoenix dactylifera]
          Length = 659

 Score =  161 bits (408), Expect = 5e-42
 Identities = 118/267 (44%), Positives = 142/267 (53%), Gaps = 12/267 (4%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQ-SRSHSRWQREXXXXXXXXXXXXXXXNPKFSKRKHPGSQVPLKKRFD 177
           GRTG  TSGR+N  SR  SRW+RE               NP+++KRK  GSQVPLKKR D
Sbjct: 13  GRTG--TSGRKNNHSRPQSRWRREGSYSDGSDSKDDDSDNPRYNKRKPAGSQVPLKKRLD 70

Query: 178 PPEXXXXXXXXXXXXXXXXXXXXXXS--APSIGSDLYXXXXXXXXLGKMSELDREMILAE 351
           PPE                      S  APS+GSDLY        LGKMSELDRE+ILAE
Sbjct: 71  PPEKDKRSGWADDDDDDDDRHSDDESDSAPSVGSDLYRDEADKEELGKMSELDRELILAE 130

Query: 352 RSTKIDDYRLKKKARETSSKVDMKARKE--XXXXXXXXXXXXXDKPASKSDALNELRAKR 525
           RSTKIDDY+LKK AR +S+K++ K++KE               D+ A+KS AL+ELRAKR
Sbjct: 131 RSTKIDDYKLKKMARASSAKME-KSQKESPPPLPYRSRSSARTDRTAAKS-ALDELRAKR 188

Query: 526 MKQQDPEGYR-RMRDT---PGGVGFGTKDSSPAKLRSVPLP--TLXXXXXXXXXXXXXXX 687
           M+QQ PEGYR R +D     G  G G +D SP K RS   P   L               
Sbjct: 189 MRQQAPEGYRSRFKDAIGDGGSSGAGNQDMSPPKHRSAASPPSDLSNDRESGGRMDSEDE 248

Query: 688 XXXXXNEM-DSSEDITVSKSDTLKYED 765
                N+M D   D + S+ D LK+ED
Sbjct: 249 RFPGNNKMEDDLLDDSPSRLDPLKFED 275


>ref|XP_020101316.1| protein RTF1 homolog [Ananas comosus]
          Length = 646

 Score =  151 bits (381), Expect = 3e-38
 Identities = 111/270 (41%), Positives = 136/270 (50%), Gaps = 15/270 (5%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXX-NPKFSKRKHPGSQVPLKKRFD 177
           GRTGSS  G R  S S S+W R+                N ++SK+K  GSQVPLKKR D
Sbjct: 13  GRTGSS--GGRKLSHSQSKWHRQGSYSDGSDSKDDSDGPNSRYSKKKPSGSQVPLKKRLD 70

Query: 178 PPEXXXXXXXXXXXXXXXXXXXXXXSAPSIGSDLYXXXXXXXXLGKMSELDREMILAERS 357
                                    SAPSIGSDLY        L +M+ELDREMILAERS
Sbjct: 71  QD---------YDDNNDRHSGDESDSAPSIGSDLYKDEDDKEQLERMTELDREMILAERS 121

Query: 358 TKIDDYRLKKKARETSSKVDMKARKE--------XXXXXXXXXXXXXDKPASKSDALNEL 513
           T+IDDY+LKK AR +SSK++ K RKE                     DK A+KS ALNEL
Sbjct: 122 TRIDDYKLKKMARASSSKMEKKGRKESPPPLPSRGRSSTRTDSSTRTDKSAAKS-ALNEL 180

Query: 514 RAKRMKQQDPEGY-RRMRDTPGGVGFGT---KDSSPAKLRSVPLPTLXXXXXXXXXXXXX 681
           RAKRM+QQDP+GY RR++D  G    G+   +D+SP +    P   L             
Sbjct: 181 RAKRMRQQDPDGYRRRLKDLAGEGVIGSVSNRDTSPKRKAGSPPSDLSNEAESGGRSDSE 240

Query: 682 XXXXXXXNEMDSS--EDITVSKSDTLKYED 765
                  N+MD    EDI+ S+ D LK+ED
Sbjct: 241 DEGFNNDNKMDDDLLEDISPSRIDPLKFED 270


>gb|PKA58442.1| hypothetical protein AXF42_Ash013948 [Apostasia shenzhenica]
          Length = 635

 Score =  128 bits (322), Expect = 4e-30
 Identities = 83/197 (42%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXXNPKFSKRKHPGSQVPLKKRFDP 180
           GRT  S S R+++S  H+RW +E               N +  K  H  S  P+KKR+  
Sbjct: 13  GRT--SKSSRKSKSHRHARWNQEGPCSDASDSDEDDG-NKRLLKGNHSSSSFPVKKRY-- 67

Query: 181 PEXXXXXXXXXXXXXXXXXXXXXXSAPSIGSDLYXXXXXXXXLGKMSELDREMILAERST 360
            E                      SAPS+GSDLY        L KMSEL REMILAERST
Sbjct: 68  -ETSRKDQDVYSDYNDKSSGDDSDSAPSVGSDLYKDDRDKEELAKMSELAREMILAERST 126

Query: 361 KIDDYRLKKKARETSSKVDMKARKE--XXXXXXXXXXXXXDKPASKSDALNELRAKRMKQ 534
           KIDDYRLKK+ARE+SS  +  + KE               DK ++KSDALNELR KRMKQ
Sbjct: 127 KIDDYRLKKRARESSSNAEKVSMKESPPPLPSRTRPSLRSDKASAKSDALNELRLKRMKQ 186

Query: 535 QDPEGYRRMRDTPGGVG 585
           Q  + YR+  +  GG G
Sbjct: 187 QGSDSYRKFNEFTGGTG 203


>ref|XP_020679180.1| protein RTF1 homolog [Dendrobium catenatum]
          Length = 251

 Score =  119 bits (297), Expect = 9e-29
 Identities = 77/187 (41%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXXNPKFSKRKHPGSQVPLKKRFDP 180
           GRT S T  ++NQS +HSR + E               N KF+K KH GS+  LKK    
Sbjct: 13  GRTSSPT--KKNQSNAHSRRRGEASGSGSNENDSD---NSKFNKWKHSGSRFSLKKSVGD 67

Query: 181 PEXXXXXXXXXXXXXXXXXXXXXXSAPSIGSDLYXXXXXXXXLGKMSELDREMILAERST 360
           P                       SA SIGSDLY        + K+SEL+RE+ILA RS 
Sbjct: 68  PPEKGNMRNWENDKDRRFNGDESDSALSIGSDLYKDEADKEEMSKLSELNRELILATRSE 127

Query: 361 KIDDYRLKKKARETSSKVDMKARK-EXXXXXXXXXXXXXDKPASKSDALNELRAKRMKQQ 537
           KIDDYRLKK+ R++S+KV+   ++               +KPA+K DALNELRAKRM+QQ
Sbjct: 128 KIDDYRLKKRRRDSSTKVENYEKEFPPTFPSHCQSSVRTEKPAAKIDALNELRAKRMRQQ 187

Query: 538 DPEGYRR 558
           +P  YR+
Sbjct: 188 EPNSYRK 194


>ref|XP_010057458.1| PREDICTED: protein RTF1 homolog [Eucalyptus grandis]
 ref|XP_018730173.1| PREDICTED: protein RTF1 homolog [Eucalyptus grandis]
 gb|KCW74627.1| hypothetical protein EUGRSUZ_E03353 [Eucalyptus grandis]
          Length = 653

 Score =  117 bits (292), Expect = 4e-26
 Identities = 85/259 (32%), Positives = 115/259 (44%), Gaps = 4/259 (1%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXX--NPKFSKRKHPGSQVPLKKRF 174
           GRT     GR  QS   SR +RE                 N  +S RK  GSQVPLKKR+
Sbjct: 13  GRTNGR--GRNKQSLPPSRRRREGSYSDHGSDSRDDESDDNRGYSSRKPSGSQVPLKKRY 70

Query: 175 DPPEXXXXXXXXXXXXXXXXXXXXXXSAPSIGSDLYXXXXXXXXLGKMSELDREMILAER 354
           +  +                          +GSDLY        L K+SEL+REMILAER
Sbjct: 71  ERDDDQGSLEEGDDDYGGSDRRGDSSDESDVGSDLYKNEDDRQRLAKLSELEREMILAER 130

Query: 355 STKIDDYRLKKKARETSSKVDMKARKEXXXXXXXXXXXXXDKPASKSDALNELRAKRMKQ 534
           + K+ D  + K  R+       +                 D+ A+K +ALNELRAKR+KQ
Sbjct: 131 AEKMTDKSMAKNLRKDRKTSQSRKETPPLASRGRSSSRSADRAAAKDEALNELRAKRLKQ 190

Query: 535 QDPEGYRRMRDTPGGVGFGTKDSSPAKLRSVPLPTLXXXXXXXXXXXXXXXXXXXXNE-- 708
           QDPE +R++RD   G G G +D S AK ++ P  +L                     +  
Sbjct: 191 QDPEAHRKLRDGSRG-GSGNRDLSSAKRKAFPASSLSSSSRSESESRSDSDDDASTGDGL 249

Query: 709 MDSSEDITVSKSDTLKYED 765
           +DS +D  +  S+TLK+ED
Sbjct: 250 VDSDDDRALLGSETLKFED 268


>gb|OUZ99889.1| hypothetical protein BVC80_8597g8 [Macleaya cordata]
          Length = 302

 Score =  112 bits (281), Expect = 6e-26
 Identities = 82/218 (37%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXXNPK--FSKRKHPGSQVPLKKRF 174
           GRTG+   GR   SR  SR +RE               +    +  RK  GSQVPLKKR 
Sbjct: 13  GRTGAP--GRNRHSRPPSRRKREGSYSDDGSDSKDDDSDDDRGYVSRKPAGSQVPLKKRL 70

Query: 175 DPPEXXXXXXXXXXXXXXXXXXXXXXSAPS-IGSDLYXXXXXXXXLGKMSELDREMILAE 351
           DP E                      S  S +GSDLY        L KM+EL REMIL++
Sbjct: 71  DPSEKDDDRGSRGDDDDYEDDDRRGSSEDSDVGSDLYKDDDDREELAKMTELQREMILSD 130

Query: 352 RSTKIDDYRLKKKARETSSKVDMKARK-----EXXXXXXXXXXXXXDKPASKSDALNELR 516
           R+ + DD RL ++ R   S    K +                    ++ A+K DALNELR
Sbjct: 131 RAQRRDDQRLTERVRAKQSSSGKKPQPGKETPRPPSSRVRSSARSAERAAAKDDALNELR 190

Query: 517 AKRMKQQDPEGYRRMRD-TPGGVGFGTKDSSPAKLRSV 627
           AKRMKQQDPEG+R++RD + GG   G +DSSP + +S+
Sbjct: 191 AKRMKQQDPEGHRKLRDASRGGTSVG-RDSSPTRRKSL 227


>gb|OVA19610.1| Plus-3 [Macleaya cordata]
          Length = 656

 Score =  112 bits (281), Expect = 1e-24
 Identities = 82/218 (37%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXXNPK--FSKRKHPGSQVPLKKRF 174
           GRTG+   GR   SR  SR +RE               +    +  RK  GSQVPLKKR 
Sbjct: 13  GRTGAP--GRNRHSRPPSRRKREGSYSDDGSDSKDDDSDDDRGYVSRKPAGSQVPLKKRL 70

Query: 175 DPPEXXXXXXXXXXXXXXXXXXXXXXSAPS-IGSDLYXXXXXXXXLGKMSELDREMILAE 351
           DP E                      S  S +GSDLY        L KM+EL REMIL++
Sbjct: 71  DPSEKDDDRGSRGDDDDYEDDDRRGSSEDSDVGSDLYKDDDDREELAKMTELQREMILSD 130

Query: 352 RSTKIDDYRLKKKARETSSKVDMKARK-----EXXXXXXXXXXXXXDKPASKSDALNELR 516
           R+ + DD RL ++ R   S    K +                    ++ A+K DALNELR
Sbjct: 131 RAQRRDDQRLTERVRAKQSSSGKKPQPGKETPRPPSSRVRSSARSAERAAAKDDALNELR 190

Query: 517 AKRMKQQDPEGYRRMRD-TPGGVGFGTKDSSPAKLRSV 627
           AKRMKQQDPEG+R++RD + GG   G +DSSP + +S+
Sbjct: 191 AKRMKQQDPEGHRKLRDASRGGTSVG-RDSSPTRRKSL 227


>ref|XP_019073959.1| PREDICTED: protein RTF1 homolog [Vitis vinifera]
          Length = 658

 Score =  111 bits (277), Expect = 4e-24
 Identities = 81/221 (36%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXXNPK--FSKRKHPGSQVPLKKRF 174
           GRTG  T+GR   S   SR +RE               +    +S RK  GSQVPLKKR 
Sbjct: 13  GRTG--TAGRNRHSLPPSRRRREGSYSDDGSDSKDDDSDEDRGYSSRKPSGSQVPLKKRL 70

Query: 175 DPPEXXXXXXXXXXXXXXXXXXXXXXSAPS-IGSDLYXXXXXXXXLGKMSELDREMILAE 351
           DP E                      S  S +GSDLY        L +++EL+REMIL +
Sbjct: 71  DPTERDDDHGSPEEGDDDGSDHEGDSSDDSDVGSDLYKNEDDRQQLAQLTELEREMILTD 130

Query: 352 RSTKIDDYRLKKKARETSSKVDMKARKEXXXXXXXXXXXXX----DKPASKSDALNELRA 519
           R+TK  D +L +K R    K   ++RKE                 D+ A+K DALNELRA
Sbjct: 131 RATKKTDKKLHEKLRSKRGKEKTQSRKESPPLQLSRGVRSSARSADRAAAKDDALNELRA 190

Query: 520 KRMKQQDPEGYRRMRDTPGGVGFGTKDSSPAKLRSVPLPTL 642
           KR+K QDPE +R++RD   G G   +  SP K R+    +L
Sbjct: 191 KRLKHQDPEAHRKLRDASRG-GSSNRGFSPVKRRAFTAASL 230


>gb|KMZ66252.1| putative RNA polymerase-associated protein RTF1 [Zostera marina]
          Length = 647

 Score =  110 bits (274), Expect = 1e-23
 Identities = 87/217 (40%), Positives = 102/217 (47%), Gaps = 9/217 (4%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXXNPKFSKRKHPGSQVPLKKRFDP 180
           GRTG S + R+N SRS +R +                 +     RKH  S  P KKRFD 
Sbjct: 13  GRTGRSNN-RKNTSRSQNRRRHNGSYSDNGSDSGDDDSDNHGPSRKHSASATPRKKRFDS 71

Query: 181 PEXXXXXXXXXXXXXXXXXXXXXXSAPSIGSDLYXXXXXXXXLGKMSELDREMILAERST 360
            E                      S  S+GSDLY        L KMSEL REMIL ERS 
Sbjct: 72  KEKDTRASREDHQEYMSDSDSD--SGVSVGSDLYKDDADREKLSKMSELQREMILTERSM 129

Query: 361 KIDDYRLKKKAR-ETSSKVDMKARKE--XXXXXXXXXXXXXDKPASKSDALNELRAKRMK 531
           K DD  LKKKAR  +SSK D + RKE               D+ A+K  ALNELRAKRMK
Sbjct: 130 KRDDKWLKKKARASSSSKNDKRPRKETPPPLSRSGRLSAKSDRNAAKDYALNELRAKRMK 189

Query: 532 QQDPEGYRRMRDTPGGVGFGTK------DSSPAKLRS 624
             DP   RR ++T GG   G+K      DSSP + R+
Sbjct: 190 YHDPIVDRRSKETNGGGVGGSKETNNPQDSSPMRRRT 226


>gb|EMS56445.1| RNA polymerase-associated protein RTF1-like protein [Triticum
           urartu]
          Length = 681

 Score =  109 bits (272), Expect = 2e-23
 Identities = 88/220 (40%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
 Frame = +1

Query: 130 KRKHPGSQVPLKKRFDPPEXXXXXXXXXXXXXXXXXXXXXX-----SAPSIGSDLYXXXX 294
           KR  PGSQVPLKKR    +                           SAPS+GSDLY    
Sbjct: 88  KRLPPGSQVPLKKRHQTGKGGGRGGGGYDDEDPDDEGRRSGGEDSDSAPSVGSDLYKDED 147

Query: 295 XXXXLGKMSELDREMILAERSTKIDDYRLKKKARETSSKVDMKARKE--XXXXXXXXXXX 468
               L  M+EL REMILAERST+IDDY+LKK AR +SSK D KARK+             
Sbjct: 148 DKEQLENMTELQREMILAERSTRIDDYKLKKLARASSSKTD-KARKDSPPPPPSRLRASA 206

Query: 469 XXDKPASKSDALNELRAKRMKQQDPEGYR-RMRDTPGGVGFGTKDSSPAKLRSVPLPTLX 645
             D+ A+KS AL+ELRAKRM+QQDPEGYR R +D     G      SP + R+   P+  
Sbjct: 207 RTDRSATKS-ALDELRAKRMRQQDPEGYRNRFKDLVPKSG-----GSPNRRRAGTPPSDG 260

Query: 646 XXXXXXXXXXXXXXXXXXXNEMDSSEDITVSKSDTLKYED 765
                              N  D   D + S+ D LK++D
Sbjct: 261 SNDGGNRGRMNDHVGIAEDNR-DDEFDESPSRLDPLKFDD 299


>dbj|BAJ96429.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 661

 Score =  108 bits (271), Expect = 3e-23
 Identities = 87/220 (39%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
 Frame = +1

Query: 130 KRKHPGSQVPLKKRFDPPE-----XXXXXXXXXXXXXXXXXXXXXXSAPSIGSDLYXXXX 294
           KR  PGSQVPLKKR    +                           SAPS+GSDLY    
Sbjct: 67  KRLPPGSQVPLKKRHQTEKGGGRGGGGYDDEDPDDDGRRSGGEDSDSAPSVGSDLYKDED 126

Query: 295 XXXXLGKMSELDREMILAERSTKIDDYRLKKKARETSSKVDMKARKE--XXXXXXXXXXX 468
               L  M+EL REMILAERST+IDDY+LKK AR +SSK D KARK+             
Sbjct: 127 DKEQLENMTELQREMILAERSTRIDDYKLKKLARASSSKTD-KARKDSPPPPPSRLRASA 185

Query: 469 XXDKPASKSDALNELRAKRMKQQDPEGYR-RMRDTPGGVGFGTKDSSPAKLRSVPLPTLX 645
             D+ A+KS AL+ELRAKRM+QQDP+GYR R +D     G      SP + R+   P+  
Sbjct: 186 RTDRSATKS-ALDELRAKRMRQQDPDGYRNRFKDLIAKSG-----GSPNRRRAGSPPSDG 239

Query: 646 XXXXXXXXXXXXXXXXXXXNEMDSSEDITVSKSDTLKYED 765
                              N  D   D + S+ D LK++D
Sbjct: 240 SNDGGNRGRMNDHAGIAEDNR-DDEFDESPSRLDPLKFDD 278


>ref|XP_017235989.1| PREDICTED: protein RTF1 homolog [Daucus carota subsp. sativus]
 gb|KZN07212.1| hypothetical protein DCAR_008049 [Daucus carota subsp. sativus]
          Length = 654

 Score =  106 bits (264), Expect = 2e-22
 Identities = 75/213 (35%), Positives = 102/213 (47%), Gaps = 5/213 (2%)
 Frame = +1

Query: 1   GRTGSSTSGRRNQSRSHSRWQREXXXXXXXXXXXXXXXNPKFSKRKHPGSQVPLKKRFDP 180
           GRTG S   R +      R                   +  +  RK   SQVPLKKR DP
Sbjct: 13  GRTGGSGRKRHSPPSPRRRRGGSYSDNGSDSREDDSDDDRGYGSRKRTSSQVPLKKRLDP 72

Query: 181 PEXXXXXXXXXXXXXXXXXXXXXXSAPSIGSDLYXXXXXXXXLGKMSELDREMILAERST 360
            E                         SIGSDLY        L +M+EL+REMIL+ERST
Sbjct: 73  LEREEHSSQEEGNDGYGREGDSDDD--SIGSDLYKDDDDRQKLAQMTELEREMILSERST 130

Query: 361 KIDDYRLKKKARETSSKVDMKARKE-----XXXXXXXXXXXXXDKPASKSDALNELRAKR 525
           KI D ++++K R+   K++ ++RK+                  D+  +K DALNELRAKR
Sbjct: 131 KITDKKMQEKLRKQKEKMN-QSRKDSRPHLSSRTSVRSSARSADRATAKDDALNELRAKR 189

Query: 526 MKQQDPEGYRRMRDTPGGVGFGTKDSSPAKLRS 624
           ++QQDP+ +RR+ D+  G G G++  SP K RS
Sbjct: 190 LRQQDPDAHRRLGDSSRG-GSGSRRYSPVKRRS 221