BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00015928
         (1154 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polyme...   506   e-166
ref|XP_020266835.1| probable RNA-dependent RNA polymerase SHL2 [...   501   e-165
ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...   497   e-163
ref|XP_020098906.1| probable RNA-dependent RNA polymerase SHL2 [...   481   e-156
gb|OAY64204.1| putative RNA-dependent RNA polymerase SHL2 [Anana...   481   e-156
ref|XP_018678117.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...   476   e-155
gb|OAY62820.1| putative RNA-dependent RNA polymerase SHL2 [Anana...   472   e-153
ref|XP_020108971.1| probable RNA-dependent RNA polymerase SHL2 [...   471   e-153
dbj|BAF05143.1| Os01g0527600, partial [Oryza sativa Japonica Gro...   442   e-151
ref|XP_002515520.1| PREDICTED: RNA-dependent RNA polymerase 6 [R...   462   e-149
ref|XP_012071453.1| RNA-dependent RNA polymerase 6 isoform X1 [J...   462   e-149
ref|XP_020683945.1| probable RNA-dependent RNA polymerase SHL2 [...   461   e-149
ref|XP_015885879.1| PREDICTED: RNA-dependent RNA polymerase 6 [Z...   461   e-149
ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [P...   460   e-149
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   458   e-148
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   458   e-148
ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   458   e-148
gb|KVH99780.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy...   437   e-147
ref|XP_007225440.1| RNA-dependent RNA polymerase 6 [Prunus persi...   457   e-147
ref|XP_012076580.1| RNA-dependent RNA polymerase 6 [Jatropha cur...   457   e-147

>ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
            guineensis]
 ref|XP_019706451.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
            guineensis]
 ref|XP_019706452.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
            guineensis]
          Length = 1198

 Score =  506 bits (1302), Expect = e-166
 Identities = 237/341 (69%), Positives = 292/341 (85%), Gaps = 1/341 (0%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKGDRPH++EASGSDLDGDLYFVTWDENLIPPS++SW+PM YTPA+PKL+PR +  +
Sbjct: 850  VFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKKSWIPMDYTPAEPKLQPRAVTPR 909

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDFF+KN+ NENLGVICNAHVVHAD S+YGA+D+NCL+LAELAATAVDFPKTGK+V M
Sbjct: 910  DIIDFFLKNMVNENLGVICNAHVVHADRSEYGALDENCLQLAELAATAVDFPKTGKLVTM 969

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDEDNSSELISVYQDLPFDENLE 483
            P+ LKPK+YPDFM K+DH SYKS+K+LGRLYR IK A+D D S+EL    ++LP+D +L+
Sbjct: 970  PSGLKPKVYPDFMGKDDHMSYKSQKVLGRLYRNIKYAADNDVSTELPCTAEELPYDTDLD 1029

Query: 482  VHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERL 303
            + GAS YL +AW+ KCSYD QLNALL Q+RV  EGEVVTGH+ S+ K+NSRKQGE+KERL
Sbjct: 1030 IPGASYYLADAWQNKCSYDGQLNALLAQYRVRSEGEVVTGHIWSLPKYNSRKQGELKERL 1089

Query: 302  KNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREA 123
            KNAY AL+K++RR FED+G D  QLTD+EK+V YE++ASAWY VTYHP+W+++S  ++E 
Sbjct: 1090 KNAYSALHKEFRRIFEDMGPDFQQLTDDEKSVSYEQRASAWYQVTYHPRWIKRSGEIKEP 1149

Query: 122  DGERVPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSL 3
            DG+ VP RLSFAW+ ADYLVRIKI S+D  K    +PID+L
Sbjct: 1150 DGDVVPARLSFAWVAADYLVRIKISSQDRQKFDNSRPIDTL 1190



 Score = 82.4 bits (202), Expect = 4e-13
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -3

Query: 1149 PSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            PSLENCF+KHGS+FS  K+N+QVIVGTVA+AKNPCLHPGD+R L A
Sbjct: 791  PSLENCFMKHGSRFSLLKKNRQVIVGTVAIAKNPCLHPGDIRILEA 836


>ref|XP_020266835.1| probable RNA-dependent RNA polymerase SHL2 [Asparagus officinalis]
 gb|ONK69832.1| uncharacterized protein A4U43_C05F27200 [Asparagus officinalis]
          Length = 1174

 Score =  501 bits (1291), Expect = e-165
 Identities = 238/310 (76%), Positives = 276/310 (89%), Gaps = 2/310 (0%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKG+RPHS+EASGSDLDGDLYFVTWDENLIPPS++SW P+ Y PA+ K EPR+IVHQ
Sbjct: 864  VFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWPPLDYEPAEAKEEPRKIVHQ 923

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
             I+DFFV+N+S+ENLGVICNAHVVHADLSDYGAMDD CLKLA+LAA AVDFPKTG  V++
Sbjct: 924  LIVDFFVRNMSSENLGVICNAHVVHADLSDYGAMDDKCLKLAKLAAIAVDFPKTGVFVNL 983

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDEDNSSELISVYQDLPFDENLE 483
            PAS KPKLYPDFM+K++H +YKSEKILGRLYRKIK ASDEDNSSELIS Y+DLP+D+  +
Sbjct: 984  PASYKPKLYPDFMNKDEHITYKSEKILGRLYRKIKSASDEDNSSELISAYEDLPYDQAFD 1043

Query: 482  VHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERL 303
            +  A +YL EAWETKCSYDRQLNALLGQFRVDKEGEVVTGH+ S+G +NSRKQGE+KERL
Sbjct: 1044 ISEAFDYLTEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHISSLGSYNSRKQGEVKERL 1103

Query: 302  KNAYYALNKKYRRAFEDVGTDL--LQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMR 129
            KNAYYALNKKYRR+FE++G  L  L L+D+E+N  YE KA+AWY VTYHPKWV+KSV M+
Sbjct: 1104 KNAYYALNKKYRRSFEEIGGHLSQLSLSDDERNQIYESKAAAWYQVTYHPKWVKKSVEMK 1163

Query: 128  EADGERVPPR 99
            EADGER+  R
Sbjct: 1164 EADGERLGVR 1173



 Score = 90.9 bits (224), Expect = 6e-16
 Identities = 41/47 (87%), Positives = 44/47 (93%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            SPSLENCFLKHGSKFSG+K NKQVIVGT+ALAKNPCLHPGD+R L A
Sbjct: 804  SPSLENCFLKHGSKFSGSKVNKQVIVGTIALAKNPCLHPGDIRILEA 850


>ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            SHL2 [Phoenix dactylifera]
          Length = 1198

 Score =  497 bits (1280), Expect = e-163
 Identities = 234/341 (68%), Positives = 289/341 (84%), Gaps = 1/341 (0%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKGDRPH++EASGSDLDGDLYFVTWDENLIPP ++SW+PM YTPA+PKLEPR +  +
Sbjct: 850  VFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPGKKSWIPMDYTPAKPKLEPRGVTPR 909

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDFF+KN+ NENLGVICNAHVVHAD S+YGA+D+ CL+LAELAATAVDFPKTGK+V M
Sbjct: 910  DIIDFFLKNMVNENLGVICNAHVVHADCSEYGALDEKCLQLAELAATAVDFPKTGKLVMM 969

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDEDNSSELISVYQDLPFDENLE 483
            P +LKPK+YPDFM K+DH SY+S+K+LG LYR IKDA+D D SSEL+   ++LP+D +L+
Sbjct: 970  PPALKPKVYPDFMGKDDHMSYQSQKVLGILYRNIKDATDNDVSSELLCTAEELPYDADLD 1029

Query: 482  VHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERL 303
            + GAS+YL +AW  +CSYD QLNALL Q+RV  EGEVVTGH+ S+ K+NSRKQGE+KERL
Sbjct: 1030 IPGASDYLADAWXKQCSYDGQLNALLAQYRVRSEGEVVTGHIWSLPKYNSRKQGELKERL 1089

Query: 302  KNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREA 123
            +NAY AL+K++RR FE++G D  QLTD+EK + YE+KASAWY VTY P+W++K   + EA
Sbjct: 1090 RNAYSALHKEFRRIFENMGPDFQQLTDDEKCLSYEQKASAWYQVTYQPRWIKKLSEIEEA 1149

Query: 122  DGERVPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSL 3
            DG+ VP RLSFAWI ADYLVRIKI+S D G+    +PID+L
Sbjct: 1150 DGDAVPARLSFAWIAADYLVRIKIRSGDRGRFDNKRPIDTL 1190



 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -3

Query: 1149 PSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            PSLENCF+KHGS+FSG K+N+QVIVGTVA+AKNPCLHPGD+R L A
Sbjct: 791  PSLENCFMKHGSRFSGIKKNRQVIVGTVAIAKNPCLHPGDIRILEA 836


>ref|XP_020098906.1| probable RNA-dependent RNA polymerase SHL2 [Ananas comosus]
 ref|XP_020098907.1| probable RNA-dependent RNA polymerase SHL2 [Ananas comosus]
          Length = 1234

 Score =  481 bits (1238), Expect = e-156
 Identities = 233/345 (67%), Positives = 284/345 (82%), Gaps = 5/345 (1%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKGDRPH++EASGSDLDGDLYFVTWD +LIPP ++SW+PM YT A+ K  PR +  Q
Sbjct: 882  VFPQKGDRPHANEASGSDLDGDLYFVTWDGDLIPPGKKSWVPMDYTAAEAKQLPRTVSPQ 941

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDFF+KN+ NENLGVICNAHVVHADLS+YGAMD+ CL+LAELAATAVDFPKTGK+V M
Sbjct: 942  DIIDFFLKNMVNENLGVICNAHVVHADLSEYGAMDEKCLQLAELAATAVDFPKTGKLVTM 1001

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDEDNSSELISV----YQDLPFD 495
            P +L+PKLYPDFM K+DH SYKSEKILG+LYR+I+DAS +D SS   +     ++D+ +D
Sbjct: 1002 PPNLRPKLYPDFMGKDDHMSYKSEKILGQLYREIRDASCDDPSSSSSAAQACSWEDVSYD 1061

Query: 494  ENLEVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEI 315
             +LEV GAS+YL +AW  KC+YD QLNALLGQ++V  EGEVVTGH+ SM K+NSRKQGE+
Sbjct: 1062 TDLEVPGASDYLFDAWNCKCAYDGQLNALLGQYKVCSEGEVVTGHIWSMPKNNSRKQGEL 1121

Query: 314  KERLKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVA 135
            KERLKNAY AL K++R  FE  G D  +L+D+EK+V YE+KASAWY VTYHPKW+ KS  
Sbjct: 1122 KERLKNAYTALRKEFRNVFETAGPDFNELSDDEKSVWYEQKASAWYQVTYHPKWLRKSCE 1181

Query: 134  MREADGERVPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSL 3
            MRE +GE VP RLSFAWI ADYLVRIK++ +D  K+   +P+D+L
Sbjct: 1182 MRELEGEVVPTRLSFAWIAADYLVRIKVRCQDKSKLNQQRPVDAL 1226



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 36/47 (76%), Positives = 42/47 (89%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            SPSL+NCF+KHG++FSGTK N+QVIVG V +AKNPCLHPGDVR L A
Sbjct: 822  SPSLQNCFIKHGTRFSGTKMNRQVIVGAVVIAKNPCLHPGDVRILEA 868


>gb|OAY64204.1| putative RNA-dependent RNA polymerase SHL2 [Ananas comosus]
          Length = 1234

 Score =  481 bits (1238), Expect = e-156
 Identities = 233/345 (67%), Positives = 284/345 (82%), Gaps = 5/345 (1%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKGDRPH++EASGSDLDGDLYFVTWD +LIPP ++SW+PM YT A+ K  PR +  Q
Sbjct: 882  VFPQKGDRPHANEASGSDLDGDLYFVTWDGDLIPPGKKSWVPMDYTAAEAKQLPRTVSPQ 941

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDFF+KN+ NENLGVICNAHVVHADLS+YGAMD+ CL+LAELAATAVDFPKTGK+V M
Sbjct: 942  DIIDFFLKNMVNENLGVICNAHVVHADLSEYGAMDEKCLQLAELAATAVDFPKTGKLVTM 1001

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDEDNSSELISV----YQDLPFD 495
            P +L+PKLYPDFM K+DH SYKSEKILG+LYR+I+DAS +D SS   +     ++D+ +D
Sbjct: 1002 PPNLRPKLYPDFMGKDDHMSYKSEKILGQLYREIRDASCDDPSSSSSAAQACSWEDVSYD 1061

Query: 494  ENLEVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEI 315
             +LEV GAS+YL +AW  KC+YD QLNALLGQ++V  EGEVVTGH+ SM K+NSRKQGE+
Sbjct: 1062 TDLEVPGASDYLFDAWNCKCAYDGQLNALLGQYKVCSEGEVVTGHIWSMPKNNSRKQGEL 1121

Query: 314  KERLKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVA 135
            KERLKNAY AL K++R  FE  G D  +L+D+EK+V YE+KASAWY VTYHPKW+ KS  
Sbjct: 1122 KERLKNAYTALRKEFRNVFETAGPDFNELSDDEKSVWYEQKASAWYQVTYHPKWLRKSCE 1181

Query: 134  MREADGERVPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSL 3
            MRE +GE VP RLSFAWI ADYLVRIK++ +D  K+   +P+D+L
Sbjct: 1182 MRELEGEVVPTRLSFAWIAADYLVRIKVRCQDKSKLNQQRPVDAL 1226



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 36/47 (76%), Positives = 42/47 (89%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            SPSL+NCF+KHG++FSGTK N+QVIVG V +AKNPCLHPGDVR L A
Sbjct: 822  SPSLQNCFIKHGTRFSGTKMNRQVIVGAVVIAKNPCLHPGDVRILEA 868


>ref|XP_018678117.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            SHL2 [Musa acuminata subsp. malaccensis]
          Length = 1199

 Score =  476 bits (1225), Expect = e-155
 Identities = 227/340 (66%), Positives = 280/340 (82%), Gaps = 1/340 (0%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            +FPQ+GDRPH++EASGSDLDGDLYFVTWDENL+PP ++SW+PM YTPA+ K  PR+I+ Q
Sbjct: 851  IFPQRGDRPHTNEASGSDLDGDLYFVTWDENLLPPGKKSWVPMDYTPAEVKQFPRQILPQ 910

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDF++KN+ NEN GVICNAHVVHAD S++GA+D+NCLKLAELAATAVDFPKTGK+V M
Sbjct: 911  DIIDFYLKNMVNENHGVICNAHVVHADRSEHGALDENCLKLAELAATAVDFPKTGKIVTM 970

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDEDNSSELISVYQDLPFDENLE 483
            P +LKPK YPDFM K D  SYKSEKILG+LYRKIKDA+D++  SEL   ++DLP+D +LE
Sbjct: 971  PPALKPKTYPDFMGKVDRLSYKSEKILGKLYRKIKDATDDELPSELPCTFEDLPYDTDLE 1030

Query: 482  VHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERL 303
            + G+ +YL +AW+ K  YDR LNALL Q+RV  EGEVVTGH+ S+ K+NSRKQGE+KERL
Sbjct: 1031 IIGSLDYLADAWQNKVVYDRHLNALLAQYRVSSEGEVVTGHIWSLPKYNSRKQGELKERL 1090

Query: 302  KNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREA 123
            KNAY +L K++R  F+ +  DLLQLTD+EK   YE KASAWY VTYHP+WV+K   ++E 
Sbjct: 1091 KNAYSSLRKQFRHIFKTMSPDLLQLTDDEKCFFYEMKASAWYQVTYHPRWVKKYNELKEP 1150

Query: 122  DGERVPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDS 6
            DG+ VP RLSFAWI ADYLVRIK++ ++ G     KPIDS
Sbjct: 1151 DGDGVPARLSFAWIAADYLVRIKVRCQERGTPDNQKPIDS 1190



 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 33/47 (70%), Positives = 40/47 (85%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            +PSLENC  KHGS+FS ++ N+QVIVGTVA+ KNPCLHPGD+R L A
Sbjct: 791  TPSLENCLSKHGSRFSASQNNRQVIVGTVAVGKNPCLHPGDIRILEA 837


>gb|OAY62820.1| putative RNA-dependent RNA polymerase SHL2 [Ananas comosus]
          Length = 1232

 Score =  472 bits (1215), Expect = e-153
 Identities = 230/345 (66%), Positives = 279/345 (80%), Gaps = 5/345 (1%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKGDRPH++EASGSDLDGDLYFVTWD +LIPP +RSW+PM Y  A+ K  PR +  Q
Sbjct: 880  VFPQKGDRPHANEASGSDLDGDLYFVTWDNDLIPPGKRSWVPMDYAAAEAKKLPRTVSPQ 939

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDFF+KN+ NENLGVICNAHVVHADLS+YGAMD+ CL+LAELA+TAVDFPKTG  V M
Sbjct: 940  DIIDFFLKNMVNENLGVICNAHVVHADLSEYGAMDEKCLQLAELASTAVDFPKTGNFVTM 999

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDEDNSSELISV----YQDLPFD 495
            P +L+PKLYPDFM K+DH SYKSEKILG+LYR+I+DAS +D SS   +     ++D+ +D
Sbjct: 1000 PPNLRPKLYPDFMGKDDHMSYKSEKILGKLYREIRDASCDDPSSSSSAAQACSWEDVSYD 1059

Query: 494  ENLEVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEI 315
             +LEV GAS+YL +AW  KC+YD QLNALLGQ++V  EGEVVTGH+ SM K+NSRKQGE+
Sbjct: 1060 MDLEVPGASDYLFDAWNCKCAYDGQLNALLGQYKVFSEGEVVTGHIWSMPKNNSRKQGEL 1119

Query: 314  KERLKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVA 135
            KERLKNAY AL K++R  FE  G    +L+D+EK+V YE+KASAWY VTYHPKW+ KS  
Sbjct: 1120 KERLKNAYAALRKEFRNVFETAGPHFDELSDDEKSVWYEQKASAWYQVTYHPKWLRKSCE 1179

Query: 134  MREADGERVPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSL 3
            M+E +GE VP RLSFAWI ADYLVRIKI+ +D  K+   +P+D L
Sbjct: 1180 MQEPEGEMVPARLSFAWIAADYLVRIKIRCQDKSKLDQQRPVDVL 1224



 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 34/47 (72%), Positives = 41/47 (87%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            SPSL+NCF+KHG++FS TK N+Q+IVG V +AKNPCLHPGDVR L A
Sbjct: 820  SPSLQNCFIKHGTRFSSTKMNRQIIVGVVVIAKNPCLHPGDVRILEA 866


>ref|XP_020108971.1| probable RNA-dependent RNA polymerase SHL2 [Ananas comosus]
          Length = 1232

 Score =  471 bits (1213), Expect = e-153
 Identities = 229/345 (66%), Positives = 280/345 (81%), Gaps = 5/345 (1%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKGDRPH++EASGSDLDGDLYFVTWD++LIPP +RSW+PM Y  A+ K  PR +  Q
Sbjct: 880  VFPQKGDRPHANEASGSDLDGDLYFVTWDDDLIPPGKRSWVPMDYAAAEAKKLPRTVSPQ 939

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDFF+KN+ NENLGVICNAHVVHADLS+YGAMD+ CL+LAELA+TAVDFPKTG  V M
Sbjct: 940  DIIDFFLKNMVNENLGVICNAHVVHADLSEYGAMDEKCLQLAELASTAVDFPKTGNFVTM 999

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDEDNSSELISV----YQDLPFD 495
            P +L+PKLYPDFM K+DH SYKSEKILG+LYR+I+DAS +D SS   +     ++D+ +D
Sbjct: 1000 PPNLRPKLYPDFMGKDDHMSYKSEKILGKLYREIRDASCDDPSSSSSAAQACSWEDVSYD 1059

Query: 494  ENLEVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEI 315
             +L+V GAS+YL +AW  KC+YD QLNALLGQ++V  EGEVVTGH+ SM K+NSRKQGE+
Sbjct: 1060 MDLKVPGASDYLFDAWNCKCAYDGQLNALLGQYKVFSEGEVVTGHIWSMPKNNSRKQGEL 1119

Query: 314  KERLKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVA 135
            KERLKNAY AL K++R  FE  G    +L+D+EK+V YE+KASAWY VTYHPKW+ KS  
Sbjct: 1120 KERLKNAYAALRKEFRNVFETAGPHFDELSDDEKSVWYEQKASAWYQVTYHPKWLRKSCE 1179

Query: 134  MREADGERVPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSL 3
            M+E +GE VP RLSFAWI ADYLVRIKI+ +D  K+   +P+D L
Sbjct: 1180 MQEPEGEMVPARLSFAWIAADYLVRIKIRCQDKSKLDQQRPVDVL 1224



 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 34/47 (72%), Positives = 41/47 (87%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            SPSL+NCF+KHG++FS TK N+Q+IVG V +AKNPCLHPGDVR L A
Sbjct: 820  SPSLQNCFIKHGTRFSSTKMNRQIIVGVVVIAKNPCLHPGDVRILEA 866


>dbj|BAF05143.1| Os01g0527600, partial [Oryza sativa Japonica Group]
 dbj|BAS72488.1| Os01g0527600, partial [Oryza sativa Japonica Group]
          Length = 385

 Score =  442 bits (1137), Expect = e-151
 Identities = 213/342 (62%), Positives = 265/342 (77%), Gaps = 2/342 (0%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKG+RPH++EASGSDLDGDLYFVTWDE LIPP ++SW PM Y+P + K  PR++   
Sbjct: 37   VFPQKGERPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPRQVSQH 96

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDFF+KN+ +ENLG ICNAHVVHADLS+YGAMD+ C+ LAELAATAVDFPKTGK+  M
Sbjct: 97   DIIDFFLKNMISENLGRICNAHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIM 156

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDEDNSSELISVYQDLPFDENLE 483
            P  LKPK+YPDFM K D  SYKSEKILGRLYR I++AS+ D  S+ +    DLP+D +LE
Sbjct: 157  PPHLKPKVYPDFMGKEDGQSYKSEKILGRLYRSIQEASNGDVVSQEVCTPNDLPYDIDLE 216

Query: 482  VHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKERL 303
            V GAS++L  AW+ KCSYD QL+ALL Q+RV  E E+VTGH+  + K++S+KQG+IK+RL
Sbjct: 217  VPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHITFLVKNSSKKQGDIKDRL 276

Query: 302  KNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMREA 123
            K AY AL K+++  FE + +D  ++ D+EKN+ YE KASAWY VTYHPKWVEKS  +   
Sbjct: 277  KTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPKWVEKSRGILGP 336

Query: 122  DGERVPPRLSFAWIPADYLVRIKIKSRDGKVGT--GKPIDSL 3
            DGE +P  LSFAWIP DYL RIK++   GKV     KP++ L
Sbjct: 337  DGEEIPASLSFAWIPVDYLARIKLRCH-GKVRVEGQKPVERL 377


>ref|XP_002515520.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ricinus communis]
 gb|EEF46969.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
          Length = 1203

 Score =  462 bits (1190), Expect = e-149
 Identities = 226/350 (64%), Positives = 277/350 (79%), Gaps = 10/350 (2%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKGDRPH++EASGSDLDGDLYFVTWDENLIPPS+RSW+PM Y  A+ K   R + HQ
Sbjct: 847  VFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQLNRPVNHQ 906

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDFF KN+ NENLG ICNAHVVHADLS+YGA+D+NC+KLAELAATAVDFPKTGK+V M
Sbjct: 907  DIIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFPKTGKLVTM 966

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDEDN--------SSELISVYQD 507
            P  LKPKLYPDFM K D+ SY S KILGRLYR++KD  ++D+        SSEL  V  D
Sbjct: 967  PPHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSELNLVRGD 1026

Query: 506  LPFDENLEVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRK 327
            +P+D++LEV G+S+Y+++AW+ KCSYD QL  LL Q++V +E EVVTGH+ SM K NSRK
Sbjct: 1027 IPYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRK 1086

Query: 326  QGEIKERLKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVE 147
            QGE+KERLK +Y++L K++R+ FE + +D  QLT++EKN+ YE+KASAWY V YHPKWV 
Sbjct: 1087 QGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVN 1146

Query: 146  KSVAMREADGERVPPRLSFAWIPADYLVRIKIKSR--DGKVGTGKPIDSL 3
            KS+ ++E D       LSFAWI ADYL RIKI+ R  DG V T KP++SL
Sbjct: 1147 KSMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDG-VDTSKPVNSL 1195



 Score = 72.4 bits (176), Expect = 7e-10
 Identities = 31/47 (65%), Positives = 39/47 (82%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            +PSLE+CF KHGS+FS +K+  QV+ GTV +AKNPCLHPGD+R L A
Sbjct: 787  NPSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRILEA 833


>ref|XP_012071453.1| RNA-dependent RNA polymerase 6 isoform X1 [Jatropha curcas]
 ref|XP_020534693.1| RNA-dependent RNA polymerase 6 isoform X2 [Jatropha curcas]
 gb|KDP38635.1| hypothetical protein JCGZ_03988 [Jatropha curcas]
          Length = 1198

 Score =  462 bits (1188), Expect = e-149
 Identities = 225/344 (65%), Positives = 275/344 (79%), Gaps = 4/344 (1%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKGDRPH++EASGSDLDGDLYFVTWDENLIPPS++SW PM Y  A+PKL  R + HQ
Sbjct: 847  VFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTPMQYDAAEPKLLSRPVSHQ 906

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDFF KN+ NE+LG ICNAHVV ADLS+YGA+D+NC+KLAELAATAVDFPKTGK+V +
Sbjct: 907  DIIDFFAKNMVNESLGAICNAHVVRADLSEYGALDENCIKLAELAATAVDFPKTGKLVTL 966

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDEDN---SSELISVYQDLPFDE 492
            P  LKPK+YPDFM K ++ SYKS KILGRLYR IKDA  +D+   SSEL     D+P+D 
Sbjct: 967  PQYLKPKMYPDFMGKEEYQSYKSTKILGRLYRDIKDAYGDDDAAASSELNCSSGDIPYDT 1026

Query: 491  NLEVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIK 312
            NLEV G+++Y++EAW+ KCSYD QL  LLGQ++V KE E+VTGH+ SM  +NSRK GE+K
Sbjct: 1027 NLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKKEEELVTGHIWSMPMYNSRKLGELK 1086

Query: 311  ERLKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAM 132
            ERLK++Y AL K++R+ FE +  D  QLTD+EKN+ YE+KASAWY VTYHPKW++KS+ +
Sbjct: 1087 ERLKHSYSALKKEFRQVFEKMDLDFEQLTDDEKNLLYERKASAWYQVTYHPKWIKKSLEL 1146

Query: 131  READGERVPPRLSFAWIPADYLVRIKIKSRDGK-VGTGKPIDSL 3
            +E D       LSFAWI ADYL RIKIK R  + V T KP++SL
Sbjct: 1147 QEPDAAGNATILSFAWIAADYLARIKIKHRGTEGVDTAKPVNSL 1190



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 35/47 (74%), Positives = 39/47 (82%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            +PSLE CF KHGS+FS TK+N QVI GTV +AKNPCLHPGDVR L A
Sbjct: 787  NPSLETCFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDVRILEA 833


>ref|XP_020683945.1| probable RNA-dependent RNA polymerase SHL2 [Dendrobium catenatum]
 gb|PKU75711.1| putative RNA-dependent RNA polymerase SHL2 [Dendrobium catenatum]
          Length = 1182

 Score =  461 bits (1187), Expect = e-149
 Identities = 217/329 (65%), Positives = 274/329 (83%), Gaps = 1/329 (0%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKG+RPHS+EASGSDLDGDLYFVTW+ NLIPPS++SW PM YTPAQ KL+PRR+ H 
Sbjct: 854  VFPQKGERPHSNEASGSDLDGDLYFVTWEPNLIPPSKKSWAPMDYTPAQEKLQPRRVTHW 913

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DII+FFVKN+ +ENLGVICNAHVVHADLS++GAMD+ C++LAELAA AVDFPKTG+MV+M
Sbjct: 914  DIIEFFVKNMVSENLGVICNAHVVHADLSEHGAMDEKCIELAELAALAVDFPKTGQMVNM 973

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDED-NSSELISVYQDLPFDENL 486
            P+SLKPKLYPDFM+K++H SYKSEKILGRLYR IK+AS+E     E    Y+++P+D++L
Sbjct: 974  PSSLKPKLYPDFMEKHEHQSYKSEKILGRLYRAIKNASNESLMHPEFTFSYENIPYDKDL 1033

Query: 485  EVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKER 306
            EV GASEYL  AW++KC YD  +NALL Q+R+  E E+V G + S+ K NSRKQG+IKE+
Sbjct: 1034 EVPGASEYLPAAWDSKCLYDTHINALLEQYRITAEAEIVIGQISSLPKFNSRKQGDIKEK 1093

Query: 305  LKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMRE 126
            +KN+Y AL++++R+ FE + T+ LQL+  EK++ +E+KASAWY VTYHP WV+KS A R 
Sbjct: 1094 IKNSYEALHREFRKVFETLETNDLQLSGVEKDLLFERKASAWYQVTYHPDWVQKSAARRG 1153

Query: 125  ADGERVPPRLSFAWIPADYLVRIKIKSRD 39
             DG  VPPRLSFAWI ADYL  +K+K R+
Sbjct: 1154 PDGGEVPPRLSFAWIAADYLSGLKLKGRE 1182



 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 34/47 (72%), Positives = 41/47 (87%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            +PSLENCF KHGS+F  TK+ K+++VGTVA+AKNPCLHPGDVR L A
Sbjct: 794  TPSLENCFSKHGSRFLATKKEKKIVVGTVAVAKNPCLHPGDVRILEA 840


>ref|XP_015885879.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885880.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885881.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885882.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885883.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
          Length = 1197

 Score =  461 bits (1187), Expect = e-149
 Identities = 223/343 (65%), Positives = 281/343 (81%), Gaps = 3/343 (0%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKG+RPH++EASGSDLDGDLYFVTWDENLIPPS++SW+PM Y  A+ K   R +  +
Sbjct: 847  VFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMQYDAAETKQLTRPVTQE 906

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DII+FF KN+ NENLG ICNAHVVHADLS++GA+D+ CLKLA+LAATAVDFPKTGK+V M
Sbjct: 907  DIIEFFSKNMVNENLGTICNAHVVHADLSEHGALDEKCLKLADLAATAVDFPKTGKIVTM 966

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDED--NSSELISVYQDLPFDEN 489
            P +LKPKLYPDFM K+++ SYKS KILG+LYRKIKDA DED   SSE+  +  D+P+D +
Sbjct: 967  PFNLKPKLYPDFMGKDEYQSYKSNKILGKLYRKIKDAYDEDVTASSEINFLPSDIPYDID 1026

Query: 488  LEVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKE 309
            LEV GAS+++V+AWE KCSYD QLN LLGQ++V++E EVVTGH+ SM K++SRKQGE+KE
Sbjct: 1027 LEVSGASDFIVDAWEQKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSSRKQGELKE 1086

Query: 308  RLKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMR 129
            RLK++Y AL K++R+ FE +     +L+D+EKN+ YE+KASAWY VTYHP+WV+KS+ ++
Sbjct: 1087 RLKHSYSALKKEFRQIFEKMEEKFEELSDDEKNIIYEQKASAWYQVTYHPEWVKKSLDLQ 1146

Query: 128  EADGERVPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSL 3
            E DG R    LSFAWI ADYL RIKI+ R  G V   KPI++L
Sbjct: 1147 EPDGSRYAVMLSFAWIAADYLTRIKIRCRGVGNVDCDKPINAL 1189



 Score = 70.5 bits (171), Expect = 3e-09
 Identities = 31/47 (65%), Positives = 37/47 (78%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            +PSLENCF KHGS+F+   +N +VI G V +AKNPCLHPGDVR L A
Sbjct: 787  NPSLENCFSKHGSRFNERNDNLEVIKGFVVIAKNPCLHPGDVRILEA 833


>ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [Prunus mume]
          Length = 1196

 Score =  460 bits (1184), Expect = e-149
 Identities = 225/344 (65%), Positives = 279/344 (81%), Gaps = 4/344 (1%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKGDRPH+DEASGSDLDGDLYFVTWDENLIPPS++SWMPM Y PA+ K + R +  Q
Sbjct: 845  VFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKRQGRPVTQQ 904

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDFFVKN++NENLG ICNAHVVHAD SDYGA+D+NCLKLAELAA AVDFPKTGK+V +
Sbjct: 905  DIIDFFVKNMTNENLGPICNAHVVHADRSDYGALDENCLKLAELAALAVDFPKTGKIVTL 964

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDED--NSSELISVYQDLPFDEN 489
            P  LKP+LYPDF+ K D+ SYKS KILGRLYRK++DA DED   +SEL  V  D+P+D +
Sbjct: 965  PQHLKPRLYPDFLGKEDNQSYKSTKILGRLYRKVRDAYDEDAATTSELHYVPSDIPYDMD 1024

Query: 488  LEVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKE 309
            LEV GA++++ +AWE KCSYD QL  L+GQ++V +E E+VTGH+ S+ K NS+KQGE+KE
Sbjct: 1025 LEVPGAADFIFDAWEKKCSYDGQLKGLMGQYKVKREEEIVTGHVWSIPKSNSKKQGELKE 1084

Query: 308  RLKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMR 129
            RL ++Y AL K++R+ FE++ ++L  LTD+EKN+  EKKASAWY VTYHPKWV++S  ++
Sbjct: 1085 RLSHSYNALKKEFRQMFENLDSNLEALTDDEKNILCEKKASAWYQVTYHPKWVKQSPPLQ 1144

Query: 128  EADGE-RVPPRLSFAWIPADYLVRIKIKSRDGK-VGTGKPIDSL 3
            E DG   V   LSFAWI ADYL RIKIK R  + + + KPI+SL
Sbjct: 1145 EPDGPGDVVVMLSFAWIAADYLARIKIKCRGVEHIDSTKPINSL 1188



 Score = 68.6 bits (166), Expect = 1e-08
 Identities = 30/47 (63%), Positives = 36/47 (76%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            +PSLE+CF KHGS F+  + N QVI G V +AKNPCLHPGD+R L A
Sbjct: 785  TPSLESCFAKHGSSFAQIERNLQVIKGYVVIAKNPCLHPGDIRILEA 831


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
 gb|PNT33711.1| hypothetical protein POPTR_006G253500v3 [Populus trichocarpa]
          Length = 1198

 Score =  458 bits (1179), Expect = e-148
 Identities = 219/344 (63%), Positives = 279/344 (81%), Gaps = 4/344 (1%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKG+RPH++EASGSDLDGDLYFVTWDENLIPPS+RSW+PM Y  A+ K   R + HQ
Sbjct: 847  VFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLTRPVNHQ 906

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DI++FF KN++NENLG ICNAHVV ADLS+YGA+D+ CL LAELAATAVDFPKTGK+V M
Sbjct: 907  DIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKTGKIVSM 966

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDEDN---SSELISVYQDLPFDE 492
            P+ LKPK+YPDFM K +H SYKS+KILGRLYR+IKDA D+D+   SSEL  V  D+P+D 
Sbjct: 967  PSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSELNFVRGDIPYDL 1026

Query: 491  NLEVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIK 312
            +LEV GA++++ +AW+ KCSYD QLN LL Q++V +E EVVTGH+ SM K +SRKQG++K
Sbjct: 1027 DLEVLGATDFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSRKQGDLK 1086

Query: 311  ERLKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAM 132
            ERLK++Y  L +++R+ FE +  D  QL D+EKN+ YE+KASAWY VTYHP W++KS+ +
Sbjct: 1087 ERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHWIQKSLEL 1146

Query: 131  READGERVPPRLSFAWIPADYLVRIKIK-SRDGKVGTGKPIDSL 3
            +++DG  +   LSFAWI ADYL RIKI+ SR G V + KP++SL
Sbjct: 1147 QDSDGAGISVMLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSL 1190



 Score = 76.3 bits (186), Expect = 4e-11
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = -3

Query: 1143 LENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            LENCF+KHGSKFS TK+N QV+ GTV +AKNPCLHPGD+R L A
Sbjct: 790  LENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEA 833


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
 gb|PNS92354.1| hypothetical protein POPTR_018G028100v3 [Populus trichocarpa]
          Length = 1200

 Score =  458 bits (1179), Expect = e-148
 Identities = 224/343 (65%), Positives = 274/343 (79%), Gaps = 3/343 (0%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKG+RPH++EASGSDLDGDLYFVTWDENLIPPS+RSW+PM Y  A+ KL  R + HQ
Sbjct: 850  VFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPVNHQ 909

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DII+FF KN+ N+NLG ICNAHVVHADLS+YGA D NCL LAELAATAVDFPKTGK+V M
Sbjct: 910  DIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKTGKVVSM 969

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDED--NSSELISVYQDLPFDEN 489
            P  LKPK+YPDFM K ++ SYKSEKILGRLYR+IKDA DED   SSEL  V  D+P+D +
Sbjct: 970  PPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLVPGDIPYDSD 1029

Query: 488  LEVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKE 309
            LEV GAS+Y+ +AW+ KCSYD QLN LL Q++V +E EVVTGH+ SM K++SRKQGE+K+
Sbjct: 1030 LEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGELKD 1089

Query: 308  RLKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMR 129
            RLK++Y +L K++R+ FE +  +  QL D EKN  YE+KASAWY V YHP WV+KS+ ++
Sbjct: 1090 RLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSLELQ 1149

Query: 128  EADGERVPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSL 3
            + DG      LSFAWI ADYL RIKI+ R+ G V + KP++SL
Sbjct: 1150 DPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSL 1192



 Score = 72.0 bits (175), Expect = 9e-10
 Identities = 32/45 (71%), Positives = 37/45 (82%)
 Frame = -3

Query: 1146 SLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            SLE CF+KHG+KFS  ++N QVI GTV +AKNPCLHPGDVR L A
Sbjct: 792  SLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEA 836


>ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
 ref|XP_010254391.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
 ref|XP_010254392.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
 ref|XP_010254393.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
          Length = 1193

 Score =  458 bits (1178), Expect = e-148
 Identities = 223/342 (65%), Positives = 278/342 (81%), Gaps = 2/342 (0%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKGDRPH++EASGSDLDGDLYFVTWDE+LIPPS++S +PM Y+PA+ K  PR + H+
Sbjct: 845  VFPQKGDRPHTNEASGSDLDGDLYFVTWDEHLIPPSKQSLVPMDYSPAEVKKLPRDVNHR 904

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            D+IDFF+K++ NE LGVICNAHVVHADLS+YGA+D+ C++LAELAATAVDFPKTGK+V +
Sbjct: 905  DLIDFFMKSMVNEKLGVICNAHVVHADLSEYGALDEKCIQLAELAATAVDFPKTGKVVTV 964

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDED-NSSELISVYQDLPFDENL 486
            P  LKPK YPDFM K +  SYKS KILG+LYRKIKD SDED   SE+    +D+P+D +L
Sbjct: 965  PQELKPKRYPDFMGKEEFQSYKSNKILGKLYRKIKDFSDEDVEESEITFAAEDIPYDVHL 1024

Query: 485  EVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKER 306
            EV G+S++L +AW  KC +D QL  LLGQ++V++E EVVTGH+ SM K+NS KQGE+KER
Sbjct: 1025 EVLGSSDHLADAWNLKCLHDAQLTTLLGQYKVNREEEVVTGHIWSMPKYNSNKQGELKER 1084

Query: 305  LKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMRE 126
            LKNAY AL K++R+AFE +  + LQLTD+EKN  YE+KASAWY VTYHP+W+ K++ +RE
Sbjct: 1085 LKNAYNALKKEFRQAFEKI-DETLQLTDDEKNTIYEQKASAWYQVTYHPRWIMKTLKLRE 1143

Query: 125  ADGERVPPRLSFAWIPADYLVRIKIKSRD-GKVGTGKPIDSL 3
             + E  P  LSFAWIPADYLVRIKIK RD   V   KPI++L
Sbjct: 1144 HEDESNPAMLSFAWIPADYLVRIKIKHRDMENVDARKPINAL 1185



 Score = 75.9 bits (185), Expect = 5e-11
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = -3

Query: 1149 PSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            PSLENCF KHGS+FS  K+N QV+ G VA+AKNPCLHPGD+R L A
Sbjct: 786  PSLENCFSKHGSRFSEVKKNTQVVKGIVAIAKNPCLHPGDIRILEA 831


>gb|KVH99780.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
            var. scolymus]
          Length = 506

 Score =  437 bits (1123), Expect = e-147
 Identities = 216/343 (62%), Positives = 268/343 (78%), Gaps = 3/343 (0%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            +FPQKGDRPH+DEASGSDLDGDLYFVTWD NLIPPS++SW PM YT A+ KL PR     
Sbjct: 160  IFPQKGDRPHTDEASGSDLDGDLYFVTWDXNLIPPSKQSWPPMEYTAAEAKLLPR----D 215

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDFF KN+ N++LG ICNAHVVHAD+SD GA++  C+KLAELAATAVDFPKTGK+V+M
Sbjct: 216  DIIDFFTKNMVNDSLGTICNAHVVHADMSDDGALEKKCIKLAELAATAVDFPKTGKIVNM 275

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKD--ASDEDNSSELISVYQDLPFDEN 489
            P +L+PKLYPDFM K    SYKS+KILG+LYR +KD  A+D   SSEL+ +   +P+DE+
Sbjct: 276  PPALRPKLYPDFMGKESFQSYKSKKILGKLYRHVKDCRATDVTPSSELLILPSXIPYDED 335

Query: 488  LEVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKE 309
            LEV  A+ ++ +AW  K SYDR+LN LLGQ++V +E E+VTGH+ SM KH S+KQGE+KE
Sbjct: 336  LEVREAASFVNDAWGCKLSYDRRLNGLLGQYKVAREEEIVTGHIWSMPKHASKKQGELKE 395

Query: 308  RLKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMR 129
            R+K+AY AL K++R+ F+ +G D  Q+ +EE+N RYE+KASAWY VTYHP WV KS+A++
Sbjct: 396  RIKHAYSALRKEFRKVFDYLGPDFDQIPEEERNERYERKASAWYQVTYHPIWVRKSLALQ 455

Query: 128  EADGERVPPRLSFAWIPADYLVRIKIKSRDGKVG-TGKPIDSL 3
            E   E     LSFAWI ADYL RIKIK R    G + KPIDSL
Sbjct: 456  EPGREGETVNLSFAWIAADYLARIKIKRRGAGDGRSQKPIDSL 498



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            +PS+ENCF+KHGS+FS TK N  VI GTV +AKNPCLHPGDVR L A
Sbjct: 100  NPSVENCFVKHGSRFSETKRNLTVIKGTVVIAKNPCLHPGDVRVLEA 146


>ref|XP_007225440.1| RNA-dependent RNA polymerase 6 [Prunus persica]
 ref|XP_020409777.1| RNA-dependent RNA polymerase 6 [Prunus persica]
 gb|ONI34398.1| hypothetical protein PRUPE_1G480300 [Prunus persica]
 gb|ONI34399.1| hypothetical protein PRUPE_1G480300 [Prunus persica]
          Length = 1196

 Score =  457 bits (1176), Expect = e-147
 Identities = 225/344 (65%), Positives = 277/344 (80%), Gaps = 4/344 (1%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKGDRPH+DEASGSDLDGDLYFVTWDENLIPPS++SWMPM Y PA+ KL+ R +  Q
Sbjct: 845  VFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKLQGRPVTQQ 904

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDFFVKN++NENLG ICNAHVVHAD SDYGA+D NCLKLAELAA AVDFPKTGK+V +
Sbjct: 905  DIIDFFVKNMTNENLGPICNAHVVHADRSDYGALDVNCLKLAELAALAVDFPKTGKIVSL 964

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDED--NSSELISVYQDLPFDEN 489
            P  LKP+LYPDF+ K D+ SYKS KILGRLYRK++DA DED   SSEL     D+P+D +
Sbjct: 965  PQHLKPRLYPDFLGKEDNQSYKSTKILGRLYRKVRDAYDEDAATSSELHYFPSDIPYDMD 1024

Query: 488  LEVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIKE 309
            LEV GA++++ +AWE KCSYD QL  L+GQ++V +E E+VTGH+ S+ K NS+KQGE+KE
Sbjct: 1025 LEVPGAADFVFDAWEKKCSYDGQLKGLMGQYKVKREEEIVTGHVWSIPKSNSKKQGELKE 1084

Query: 308  RLKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAMR 129
            RL ++Y AL K++R+ FE++ ++L  LTD+EKN+  EKKASAWY VTYHPKWV++S  ++
Sbjct: 1085 RLSHSYNALKKEFRQMFENLDSNLEALTDDEKNLLCEKKASAWYQVTYHPKWVKQSPPLQ 1144

Query: 128  EADGE-RVPPRLSFAWIPADYLVRIKIKSRDGK-VGTGKPIDSL 3
            E DG   V   LSFAWI ADYL RIKIK    + + + KPI+SL
Sbjct: 1145 EPDGPGDVVVMLSFAWIAADYLARIKIKCHGVEHIDSTKPINSL 1188



 Score = 66.2 bits (160), Expect = 6e-08
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            +P LE+CF KHGS F+  + N QVI G V +AKNPCLHPGD+R L A
Sbjct: 785  TPLLESCFAKHGSSFAQIERNLQVIKGHVVIAKNPCLHPGDIRILEA 831


>ref|XP_012076580.1| RNA-dependent RNA polymerase 6 [Jatropha curcas]
 gb|KDP33599.1| hypothetical protein JCGZ_07170 [Jatropha curcas]
          Length = 1199

 Score =  457 bits (1175), Expect = e-147
 Identities = 218/344 (63%), Positives = 278/344 (80%), Gaps = 4/344 (1%)
 Frame = -1

Query: 1022 VFPQKGDRPHSDEASGSDLDGDLYFVTWDENLIPPSRRSWMPMAYTPAQPKLEPRRIVHQ 843
            VFPQKGDRPH++EASGSDLDGDLYFVTWD+NLIPPS++SW PM Y  A+ KL  R + HQ
Sbjct: 847  VFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQ 906

Query: 842  DIIDFFVKNISNENLGVICNAHVVHADLSDYGAMDDNCLKLAELAATAVDFPKTGKMVHM 663
            DIIDFF KN+ NENLG ICNAHVVHADLS++GA+D+NC+KLAELAATAVDFPKTGK+V M
Sbjct: 907  DIIDFFAKNMVNENLGAICNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTM 966

Query: 662  PASLKPKLYPDFMDKNDHHSYKSEKILGRLYRKIKDASDEDNS---SELISVYQDLPFDE 492
            P  LKPK+YPDFM K ++ SYKS KILGRLYR+I DA  +D++   SEL  +  D+P+D 
Sbjct: 967  PPYLKPKMYPDFMGKEEYQSYKSTKILGRLYRQIIDAYGDDDAAAFSELNCLSGDIPYDA 1026

Query: 491  NLEVHGASEYLVEAWETKCSYDRQLNALLGQFRVDKEGEVVTGHLCSMGKHNSRKQGEIK 312
            +LEV G+++Y++EAW+ KCSYD QL  LLGQ++V +E E+VTGH+ SM   NSRKQG++K
Sbjct: 1027 DLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKREEELVTGHIWSMPMSNSRKQGDLK 1086

Query: 311  ERLKNAYYALNKKYRRAFEDVGTDLLQLTDEEKNVRYEKKASAWYCVTYHPKWVEKSVAM 132
            ERLK++Y AL K++R+ FE +  D+ QLTD+EKN++YE+KASAWY V YHPKW++KS+ +
Sbjct: 1087 ERLKHSYSALKKEFRQVFEGMNLDVEQLTDDEKNLQYERKASAWYQVAYHPKWIKKSLEL 1146

Query: 131  READGERVPPRLSFAWIPADYLVRIKIKSRDGK-VGTGKPIDSL 3
            +E+D       LSF+WI ADYL RIKIK R  + + T KP++SL
Sbjct: 1147 QESDAPGNATMLSFSWIAADYLARIKIKRRGTEGIDTAKPVNSL 1190



 Score = 76.3 bits (186), Expect = 4e-11
 Identities = 35/47 (74%), Positives = 38/47 (80%)
 Frame = -3

Query: 1152 SPSLENCFLKHGSKFSGTKENKQVIVGTVALAKNPCLHPGDVRXLSA 1012
            +P LE CF KHGSKFS TK+N QVI GTV +AKNPCLHPGDVR L A
Sbjct: 787  NPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVRILEA 833