BLASTX nr result

ID: Ophiopogon24_contig00015790 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00015790
         (893 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020270647.1| uncharacterized protein LOC109845787 [Aspara...    64   1e-07
ref|XP_020271748.1| uncharacterized protein LOC109846922 [Aspara...    47   2e-07
gb|OAY83559.1| putative ribonuclease H protein, partial [Ananas ...    52   4e-07
ref|XP_020264999.1| uncharacterized protein LOC109840677 [Aspara...    62   6e-07
gb|OVA12342.1| Reverse transcriptase zinc-binding domain [Maclea...    60   1e-06
emb|CAN79190.1| hypothetical protein VITISV_000232 [Vitis vinifera]    44   2e-06
emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]    44   2e-06
gb|OVA04249.1| Reverse transcriptase zinc-binding domain [Maclea...    59   3e-06
ref|XP_016169939.1| uncharacterized protein LOC107612729 [Arachi...    47   4e-06
gb|OAY76175.1| putative ribonuclease H protein [Ananas comosus]        48   5e-06
ref|XP_022863885.1| ubiquitin carboxyl-terminal hydrolase 12-lik...    59   5e-06
ref|XP_020263458.1| uncharacterized protein LOC109839445 [Aspara...    58   5e-06
emb|CAH65761.1| H0215A08.3 [Oryza sativa]                              52   1e-05

>ref|XP_020270647.1| uncharacterized protein LOC109845787 [Asparagus officinalis]
          Length = 345

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   NFLNNSGVICPFYNIIWQNIVPLKVRILVWTIVNNCILTLDNLRR*FLVKD-NCVFCKQD 177
           + LNN G + P +N IW + VPLKV+I  W +    + T DNL +     D +C FC QD
Sbjct: 153 SLLNNGGTVSPLHNFIWYSPVPLKVKIFFWILSKKKLQTKDNLHKKGWGGDPSCPFCNQD 212

Query: 178 EENIDHFFITCT 213
            E  DH FI C+
Sbjct: 213 IEAHDHLFIPCS 224


>ref|XP_020271748.1| uncharacterized protein LOC109846922 [Asparagus officinalis]
          Length = 231

 Score = 46.6 bits (109), Expect(2) = 2e-07
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +1

Query: 4   FLNNSGVICPFYNIIWQNIVPLKVRILVWTIVNNCILTLDNL-RR*FLVKDNCVFCKQDE 180
           FLN+ GV     N+ W   VPLKV++LVW  +   + T D L R+   V+  C  C   +
Sbjct: 34  FLNDGGVRYDCMNL-WGLPVPLKVKVLVWLALRESLNTKDMLNRKGIQVEKTCCLCSAKD 92

Query: 181 ENIDHFFITC 210
           E+  H F+ C
Sbjct: 93  EDHAHLFLNC 102



 Score = 37.7 bits (86), Expect(2) = 2e-07
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = +2

Query: 278 ILICGGIGERGM*RKKKLVS*DRSFMAFIWVIWNERYGRIFKKTNSSKLSLLVSVMFFVN 457
           + +C   G  G    KKLV       + IW +W ER  R+F       L LL  ++ +  
Sbjct: 130 VWLCWNGGTDGESNLKKLVW----ICSLIWSVWQERNDRLFSNKQKGSLLLLNKIVTYST 185

Query: 458 LWIGS 472
            W+GS
Sbjct: 186 FWLGS 190


>gb|OAY83559.1| putative ribonuclease H protein, partial [Ananas comosus]
          Length = 652

 Score = 52.0 bits (123), Expect(2) = 4e-07
 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
 Frame = +1

Query: 46  IWQNIVPLKVRILVWTIVNNCILTLDNL-RR*FLVKDNCVFCKQDEENIDHFFITCTXXX 222
           +W +  P +V+   W +  N ILTL+NL RR +++   C  C    E+I H F+ C    
Sbjct: 507 VWYSFAPPRVQFFTWLLYKNRILTLENLRRRGWILASRCELCLNAGEDIIHLFLLCPYSL 566

Query: 223 XXXXXXXXXXXXRCLPSPNF----DLWRDWRKR 309
                        CLP P+F    D W  W  R
Sbjct: 567 AVWASLNLLP---CLPQPSFLGFGDSWAMWSSR 596



 Score = 31.2 bits (69), Expect(2) = 4e-07
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 350 FMAFIWVIWNERYGRIFKKTNSSKLS 427
           F  F W IW+ER  RIF  T S+ LS
Sbjct: 609 FSCFAWSIWSERNRRIFDNTCSTPLS 634


>ref|XP_020264999.1| uncharacterized protein LOC109840677 [Asparagus officinalis]
          Length = 962

 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   NFLNNSGVICPFYNIIWQNIVPLKVRILVWTIVNNCILTLDNLRR*FLVKDN-CVFCKQD 177
           NF  + G++ P+Y + W NI+P KVR  +W +  N + T DNL       DN C FC   
Sbjct: 784 NFQISRGILTPYYKVTWNNIIPSKVRFFMWLLTLNKLHTKDNLLSKGWQGDNICSFCGLT 843

Query: 178 EENIDHFFITCT 213
           EE+ DH F +C+
Sbjct: 844 EESRDHLFYSCS 855


>gb|OVA12342.1| Reverse transcriptase zinc-binding domain [Macleaya cordata]
          Length = 264

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = +1

Query: 43  IIWQNIVPLKVRILVWTIVNNCILTLDNL-RR*FLVKDNCVFCKQDEENIDHFFITCT 213
           ++W+  VP KV  ++W++  N I T+DNL RR  +V++ C  CKQ EE + H FI C+
Sbjct: 98  MLWRKGVPSKVSFMIWSVFQNAIPTMDNLRRRGMVVRNRCWLCKQQEETVSHLFIHCS 155


>emb|CAN79190.1| hypothetical protein VITISV_000232 [Vitis vinifera]
          Length = 1935

 Score = 44.3 bits (103), Expect(2) = 2e-06
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
 Frame = +1

Query: 43   IIWQNIVPLKVRILVWTIVNNCILTLD--NLRR*F--LVKDNCVFCKQDEENIDHFFITC 210
            ++W + VP K++  VW + +  + T D   LRR +  L  D C+ C +  E +DH F+ C
Sbjct: 1761 LVWNSQVPFKIKSFVWLVAHKKVNTNDMLQLRRPYKALSPDICMLCMEQGETVDHLFLHC 1820

Query: 211  T 213
            +
Sbjct: 1821 S 1821



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 320  KKKLVS*DRSFMAFIWVIWNERYGRIFKKTNSSKLSLLVSVMFFVNLWI 466
            K+ +V    + +A +WV+W ER  RIF+  + +  +L   + F  +LW+
Sbjct: 1859 KRGIVLWQAACIAILWVVWRERNARIFEDKSRNSENLWDMIHFLASLWV 1907


>emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]
          Length = 1765

 Score = 44.3 bits (103), Expect(2) = 2e-06
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
 Frame = +1

Query: 43   IIWQNIVPLKVRILVWTIVNNCILTLD--NLRR*F--LVKDNCVFCKQDEENIDHFFITC 210
            ++W + VP K++  VW + +  + T D   LRR +  L  D C+ C +  E +DH F+ C
Sbjct: 1161 LVWNSQVPFKIKFFVWLVAHKKVNTNDMLQLRRPYKALSPDICMLCMERGETVDHLFLHC 1220

Query: 211  T 213
            +
Sbjct: 1221 S 1221



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 320  KKKLVS*DRSFMAFIWVIWNERYGRIFKKTNSSKLSLLVSVMFFVNLWI 466
            K+ +V    + +A +WV+W ER  RIF+  + +  +L   + F  +LW+
Sbjct: 1259 KRGIVLWQAACIAILWVVWRERNARIFEDKSRNSENLWDMIHFLASLWV 1307


>gb|OVA04249.1| Reverse transcriptase zinc-binding domain [Macleaya cordata]
          Length = 245

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   NFLNNSGVICPFYNIIWQNIVPLKVRILVWTIVNNCILTLDNL-RR*FLVKDNCVFCKQD 177
           +FLN          +IW+  +P KV I+VW  + N I T+D L RR F + + C FCK++
Sbjct: 171 DFLNREEPASFPVKLIWRKEIPSKVSIMVWAAMYNAIPTIDVLRRRGFQIVNRCWFCKKN 230

Query: 178 EENIDHFFITCT 213
           EE+I H F+ C+
Sbjct: 231 EESISHLFLHCS 242


>ref|XP_016169939.1| uncharacterized protein LOC107612729 [Arachis ipaensis]
          Length = 222

 Score = 46.6 bits (109), Expect(2) = 4e-06
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
 Frame = +1

Query: 34  FYNIIWQNIVPLKVRILVWTIVNNCILTLDNLRR*FLVKDN---CVFCKQDEENIDHFFI 204
           F   IW+  VP ++ +L W ++   + T D LRR  ++  +   CV C + EE + H F+
Sbjct: 69  FTRAIWKGFVPPRIELLSWFVLIGRVNTKDRLRRLRVIDQHDTLCVLCSKSEETVFHLFL 128

Query: 205 TCTXXXXXXXXXXXXXXXRCLP---SPNFDLWRDWRKRYVEKKK 327
            C                 C P     +F+ W +     VE+K+
Sbjct: 129 GCDITWQVWCAWYAFGRSWCSPGNLKEHFESWINMAIWKVERKR 172



 Score = 33.5 bits (75), Expect(2) = 4e-06
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 350 FMAFIWVIWNERYGRIFKKTNSSKLSLLVSVMFFVNLWIG 469
           F A +W IW ER  R+F+  +SS   ++         WIG
Sbjct: 177 FFAVVWTIWLERNSRLFRNHSSSMREIINKSFASAEEWIG 216


>gb|OAY76175.1| putative ribonuclease H protein [Ananas comosus]
          Length = 484

 Score = 47.8 bits (112), Expect(2) = 5e-06
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
 Frame = +1

Query: 46  IWQNIVPLKVRILVWTIVNNCILTLDNL-RR*FLVKDNCVFCKQDEENIDHFFITCTXXX 222
           +W +  P +V+  +W +  N ILT DNL RR +++   C  C    E+I H F+ C    
Sbjct: 339 VWYSFAPPRVQFFMWLLYKNRILTHDNLRRRGWILASRCELCFNVGEDIIHLFLHCPYSL 398

Query: 223 XXXXXXXXXXXXRCLPSPNF----DLWRDWRKR 309
                        CLP P+     D W  W  R
Sbjct: 399 AVWASLNLLL---CLPQPSLLGLGDSWAMWSSR 428



 Score = 32.0 bits (71), Expect(2) = 5e-06
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 350 FMAFIWVIWNERYGRIFKKTNSSKLSLLVSV-MFFVNLWIGS 472
           F  F W IW+ER  RIF  T S+ LS    + M   N+ I S
Sbjct: 441 FSCFAWSIWSERNHRIFDNTCSTPLSTASRIRMLIANVDISS 482


>ref|XP_022863885.1| ubiquitin carboxyl-terminal hydrolase 12-like [Olea europaea var.
           sylvestris]
          Length = 1497

 Score = 59.3 bits (142), Expect = 5e-06
 Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +1

Query: 37  YNIIWQNIVPLKVRILVWTIVNNCILTLDNLRR-*FLVKDNCVFCKQDEENIDHFFITC 210
           + ++WQ  +P +V IL+WT+V   + T+DNLRR  F   + C  CK+D E IDH FI C
Sbjct: 788 WKLVWQCKLPPRVAILLWTVVRGQVSTVDNLRRKGFYATEWCYMCKKDGETIDHLFIHC 846


>ref|XP_020263458.1| uncharacterized protein LOC109839445 [Asparagus officinalis]
          Length = 309

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = +1

Query: 7   LNNSGVICPFYNIIWQNIVPLKVRILVWTIVNNCILTLDNL-RR*FLVKDNCVFCKQDEE 183
           L   G++ PF+N IW++ +PLKV+  +W +    + T DNL ++ ++    C  C Q  E
Sbjct: 96  LIKGGLLSPFHNFIWRSPIPLKVKTFLWILNKKKLQTKDNLIKKGWMGDSTCPLCSQTME 155

Query: 184 NIDHFFITC 210
             DH FITC
Sbjct: 156 THDHLFITC 164


>emb|CAH65761.1| H0215A08.3 [Oryza sativa]
          Length = 1186

 Score = 51.6 bits (122), Expect(2) = 1e-05
 Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = +1

Query: 46   IWQNIVPLKVRILVWTIVNNCILTLDNLR-R*FLVKDNCVFCKQDEENIDHFFITC-TXX 219
            IW+++ P + R  +W +  N   T D LR R     D CV C Q EE+IDH  + C    
Sbjct: 1024 IWKSLAPPRCRFFLWLVAMNKCWTADRLRSRGLPHPDRCVLCDQQEESIDHILVGCPESR 1083

Query: 220  XXXXXXXXXXXXXRCLPS--PNFDLW 291
                          CLPS  P+F LW
Sbjct: 1084 QLWWWTLRALVIPDCLPSNEPSFHLW 1109



 Score = 26.9 bits (58), Expect(2) = 1e-05
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 365  WVIWNERYGRIFKKTNSSKLSLLVSVMFFVNLW 463
            W IW ER  RIF + + S + +  +++    LW
Sbjct: 1134 WSIWKERNNRIFNQQSKSWIEVAKAMVEEAVLW 1166


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