BLASTX nr result
ID: Ophiopogon24_contig00015450
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00015450
(520 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020245878.1| pentatricopeptide repeat-containing protein ... 70 3e-20
ref|XP_020245879.1| pentatricopeptide repeat-containing protein ... 70 3e-20
ref|XP_009415073.1| PREDICTED: pentatricopeptide repeat-containi... 49 5e-11
ref|XP_008808162.1| PREDICTED: pentatricopeptide repeat-containi... 51 9e-11
ref|XP_008808163.1| PREDICTED: pentatricopeptide repeat-containi... 51 9e-11
ref|XP_010912918.2| PREDICTED: pentatricopeptide repeat-containi... 51 4e-10
ref|XP_010243522.1| PREDICTED: pentatricopeptide repeat-containi... 47 1e-09
gb|OVA20525.1| Pentatricopeptide repeat [Macleaya cordata] 46 2e-09
ref|XP_002516878.1| PREDICTED: pentatricopeptide repeat-containi... 48 2e-09
ref|XP_020110488.1| pentatricopeptide repeat-containing protein ... 47 5e-09
gb|OAY69844.1| Pentatricopeptide repeat-containing protein, chlo... 47 1e-08
gb|OAY78205.1| Pentatricopeptide repeat-containing protein, chlo... 47 1e-08
ref|XP_022137654.1| pentatricopeptide repeat-containing protein ... 45 1e-08
emb|CBI14894.3| unnamed protein product, partial [Vitis vinifera] 44 2e-08
ref|XP_010663057.1| PREDICTED: pentatricopeptide repeat-containi... 44 2e-08
ref|XP_021807656.1| pentatricopeptide repeat-containing protein ... 45 2e-08
ref|XP_008239377.1| PREDICTED: pentatricopeptide repeat-containi... 45 2e-08
gb|OWM65464.1| hypothetical protein CDL15_Pgr009054 [Punica gran... 44 5e-08
gb|PKI66629.1| hypothetical protein CRG98_012971, partial [Punic... 44 5e-08
ref|XP_023001232.1| pentatricopeptide repeat-containing protein ... 43 6e-08
>ref|XP_020245878.1| pentatricopeptide repeat-containing protein At5g50280,
chloroplastic isoform X1 [Asparagus officinalis]
gb|ONK58111.1| uncharacterized protein A4U43_C09F8240 [Asparagus officinalis]
Length = 699
Score = 70.5 bits (171), Expect(2) = 3e-20
Identities = 37/55 (67%), Positives = 41/55 (74%)
Frame = +1
Query: 214 PIRAFFKFRSLTQQDPKQEGRDSRQRNRRTSWRIAGTEADPVENTLFLDDPDAEL 378
PIR FFK RS T +PKQEGR + QRNRRTSWRIA TEADP+ DDP+AEL
Sbjct: 86 PIRVFFKSRSQTL-NPKQEGRVTLQRNRRTSWRIAQTEADPLGKNPSFDDPEAEL 139
Score = 55.5 bits (132), Expect(2) = 3e-20
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 431 VEEILRVSRNLPENSTLGEHLGSYAGKIGK 520
VEEIL+VSRNLPENSTLG+ LGSY GKIGK
Sbjct: 154 VEEILKVSRNLPENSTLGDFLGSYVGKIGK 183
>ref|XP_020245879.1| pentatricopeptide repeat-containing protein At5g50280,
chloroplastic isoform X2 [Asparagus officinalis]
Length = 695
Score = 70.5 bits (171), Expect(2) = 3e-20
Identities = 37/55 (67%), Positives = 41/55 (74%)
Frame = +1
Query: 214 PIRAFFKFRSLTQQDPKQEGRDSRQRNRRTSWRIAGTEADPVENTLFLDDPDAEL 378
PIR FFK RS T +PKQEGR + QRNRRTSWRIA TEADP+ DDP+AEL
Sbjct: 86 PIRVFFKSRSQTL-NPKQEGRVTLQRNRRTSWRIAQTEADPLGKNPSFDDPEAEL 139
Score = 55.5 bits (132), Expect(2) = 3e-20
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 431 VEEILRVSRNLPENSTLGEHLGSYAGKIGK 520
VEEIL+VSRNLPENSTLG+ LGSY GKIGK
Sbjct: 154 VEEILKVSRNLPENSTLGDFLGSYVGKIGK 183
>ref|XP_009415073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 734
Score = 48.9 bits (115), Expect(2) = 5e-11
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +1
Query: 214 PIRAFFKFRSLTQ-QDPKQEGRDSRQRNRRTSWRIAGTEADPVEN 345
PI FF+FRS + DPKQ+GR S QRNRRTSW IA ++ +++
Sbjct: 115 PILEFFRFRSSSSADDPKQDGRLSLQRNRRTSWHIANIDSADLDH 159
Score = 45.8 bits (107), Expect(2) = 5e-11
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +2
Query: 422 DSEVEEILRVSRNLPENSTLGEHLGSYAGKIGK 520
D V EIL V+R+LPEN+TLGE LG YAG++G+
Sbjct: 182 DGVVAEILGVARSLPENATLGELLGPYAGRVGE 214
>ref|XP_008808162.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic isoform X1 [Phoenix dactylifera]
Length = 756
Score = 50.8 bits (120), Expect(2) = 9e-11
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +1
Query: 214 PIRAFFKFRSLTQQDPKQEGRDSRQRNRRTSWRIAGTEADPVE 342
PIR FFK RS T+ DPK+EGR + QRNRR++W IA ++D +E
Sbjct: 121 PIRNFFKSRSETR-DPKREGRLTLQRNRRSTWHIADLQSDDIE 162
Score = 43.1 bits (100), Expect(2) = 9e-11
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +2
Query: 422 DSEVEEILRVSRNLPENSTLGEHLGSYAGKIGK 520
D V +I+ ++R LPENSTLGE L S+AGK+G+
Sbjct: 191 DGVVGKIMGIARRLPENSTLGEFLDSFAGKVGE 223
>ref|XP_008808163.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic isoform X2 [Phoenix dactylifera]
Length = 744
Score = 50.8 bits (120), Expect(2) = 9e-11
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +1
Query: 214 PIRAFFKFRSLTQQDPKQEGRDSRQRNRRTSWRIAGTEADPVE 342
PIR FFK RS T+ DPK+EGR + QRNRR++W IA ++D +E
Sbjct: 121 PIRNFFKSRSETR-DPKREGRLTLQRNRRSTWHIADLQSDDIE 162
Score = 43.1 bits (100), Expect(2) = 9e-11
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +2
Query: 422 DSEVEEILRVSRNLPENSTLGEHLGSYAGKIGK 520
D V +I+ ++R LPENSTLGE L S+AGK+G+
Sbjct: 191 DGVVGKIMGIARRLPENSTLGEFLDSFAGKVGE 223
>ref|XP_010912918.2| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Elaeis guineensis]
Length = 779
Score = 50.8 bits (120), Expect(2) = 4e-10
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = +1
Query: 214 PIRAFFKFRSLTQQDPKQEGRDSRQRNRRTSWRIAGTEADPVE 342
PI FFK RS TQ DPK+EGR + QRNRR+SW IA E+D +E
Sbjct: 159 PILNFFKSRSETQ-DPKREGRLTLQRNRRSSWHIADFESDDLE 200
Score = 40.8 bits (94), Expect(2) = 4e-10
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +2
Query: 422 DSEVEEILRVSRNLPENSTLGEHLGSYAGKI 514
D V +I+ ++R+LPENSTLGE L S+AGK+
Sbjct: 226 DGVVGKIMGIARSLPENSTLGEFLDSFAGKV 256
>ref|XP_010243522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Nelumbo nucifera]
Length = 710
Score = 47.4 bits (111), Expect(2) = 1e-09
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +2
Query: 401 ILDSRGGDSEVEEILRVSRNLPENSTLGEHLGSYAGKIGK 520
+ DS + + EIL+++RN PEN TLGE LGSYAGKIG+
Sbjct: 154 VSDSCPAEGILAEILQIARNPPENLTLGELLGSYAGKIGE 193
Score = 42.7 bits (99), Expect(2) = 1e-09
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +1
Query: 214 PIRAFFKFRSLTQQDPKQEGRDSRQRNRRTSWRIA 318
PI FFK RS TQ DP +EGR Q+NRRTSW +A
Sbjct: 95 PIVQFFKSRSATQ-DPGKEGRVHLQKNRRTSWHLA 128
>gb|OVA20525.1| Pentatricopeptide repeat [Macleaya cordata]
Length = 723
Score = 45.8 bits (107), Expect(2) = 2e-09
Identities = 23/31 (74%), Positives = 28/31 (90%), Gaps = 1/31 (3%)
Frame = +2
Query: 431 VEEILRVSRNLPENSTLGEHLG-SYAGKIGK 520
VEEIL+++RN+PENSTLGE LG SY GKIG+
Sbjct: 183 VEEILQLARNVPENSTLGELLGSSYVGKIGE 213
Score = 43.5 bits (101), Expect(2) = 2e-09
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 12/61 (19%)
Frame = +1
Query: 214 PIRAFFKFRSLTQ-QDPKQEGRDSRQRNRRTSWRIAGTEA-----------DPVENTLFL 357
PI FFK RS+T +DP+ EGR Q+NRR+SWR+A ++ + EN L L
Sbjct: 110 PIIKFFKTRSVTPTEDPEYEGRTLLQKNRRSSWRLADIKSIETDAEEEEYEEAEENELLL 169
Query: 358 D 360
D
Sbjct: 170 D 170
>ref|XP_002516878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Ricinus communis]
gb|EEF45492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 714
Score = 48.1 bits (113), Expect(2) = 2e-09
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +1
Query: 214 PIRAFFKFRSLTQQDPKQEGRDSRQRNRRTSWRIA 318
PI FFK R+ T QDP EG+ S QRNRRT WR+A
Sbjct: 94 PILKFFKSRTSTTQDPPHEGKFSLQRNRRTQWRLA 128
Score = 41.2 bits (95), Expect(2) = 2e-09
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +2
Query: 401 ILDSRGGDSE---VEEILRVSRNLPENSTLGEHLGSYAGKI 514
+L S DS V EIL ++R LPEN+ LGE LG Y GKI
Sbjct: 149 LLGSSNSDSSKGIVREILNLARELPENTILGEQLGHYKGKI 189
>ref|XP_020110488.1| pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Ananas comosus]
Length = 715
Score = 47.4 bits (111), Expect(2) = 5e-09
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +2
Query: 422 DSEVEEILRVSRNLPENSTLGEHLGSYAGKIGK 520
D V EI+R++R+LPENSTLGE LGSY G++G+
Sbjct: 161 DGVVGEIMRLARSLPENSTLGECLGSYEGRVGE 193
Score = 40.8 bits (94), Expect(2) = 5e-09
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 214 PIRAFF-KFRSLTQQDPKQEGRDSRQRNRRTSWRIA 318
P +FF + RS DPK+EGR S QRNRR+SW +A
Sbjct: 89 PFLSFFNRRRSAPVDDPKREGRPSLQRNRRSSWHLA 124
>gb|OAY69844.1| Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
comosus]
Length = 729
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +2
Query: 422 DSEVEEILRVSRNLPENSTLGEHLGSYAGKIGK 520
D V EI+R++R+LPENSTLGE LGSY G++G+
Sbjct: 175 DGVVGEIMRLARSLPENSTLGECLGSYEGRVGE 207
Score = 39.7 bits (91), Expect(2) = 1e-08
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 214 PIRAFF-KFRSLTQQDPKQEGRDSRQRNRRTSWRIA 318
P +FF + R DPK+EGR S QRNRR+SW +A
Sbjct: 102 PFLSFFNRRRGAPVDDPKREGRSSLQRNRRSSWHLA 137
>gb|OAY78205.1| Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
comosus]
Length = 834
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +2
Query: 422 DSEVEEILRVSRNLPENSTLGEHLGSYAGKIGK 520
D V EI+R++R+LPENSTLGE LGSY G++G+
Sbjct: 161 DGVVGEIMRLARSLPENSTLGECLGSYEGRVGE 193
Score = 39.3 bits (90), Expect(2) = 1e-08
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 214 PIRAFF-KFRSLTQQDPKQEGRDSRQRNRRTSWRIA 318
P +FF + R DPK+EGR S QRNRR+SW +A
Sbjct: 89 PFLSFFNRRRGAPVDDPKREGRPSLQRNRRSSWHLA 124
>ref|XP_022137654.1| pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Momordica charantia]
ref|XP_022137656.1| pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Momordica charantia]
Length = 714
Score = 45.1 bits (105), Expect(2) = 1e-08
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Frame = +1
Query: 214 PIRAFFKFRSLTQQDPKQEGRDSRQRNRRTSWRIA-GTE-ADPVENTL 351
P+ FFK R+ T QDP++E + S Q+NRR+SW +A G+E AD E T+
Sbjct: 91 PLFRFFKSRTSTTQDPQRESKVSLQKNRRSSWHLASGSEFADEAEITI 138
Score = 41.6 bits (96), Expect(2) = 1e-08
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2
Query: 422 DSEVEEILRVSRNLPENSTLGEHLGSYAGKIGK 520
D V +I+R +RNLPEN+TLGE L + G+IG+
Sbjct: 157 DGVVGDIMRTARNLPENTTLGEALADFDGRIGE 189
>emb|CBI14894.3| unnamed protein product, partial [Vitis vinifera]
Length = 746
Score = 43.5 bits (101), Expect(2) = 2e-08
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2
Query: 437 EILRVSRNLPENSTLGEHLGSYAGKIGK 520
EIL +RNLPENSTLGE LG Y G++G+
Sbjct: 144 EILHFARNLPENSTLGEVLGPYVGRVGE 171
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +1
Query: 214 PIRAFFKFRSLTQQDPKQEGRDSRQRNRRTSWRIAGTEADPVENTLF 354
PI FFK R+ TQ DP+ E + S Q+NRR SWR+A T DP + F
Sbjct: 77 PILRFFKSRTSTQ-DPRFESKFSLQKNRRPSWRLAST-TDPESDAEF 121
>ref|XP_010663057.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
ref|XP_019082196.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 43.5 bits (101), Expect(2) = 2e-08
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2
Query: 437 EILRVSRNLPENSTLGEHLGSYAGKIGK 520
EIL +RNLPENSTLGE LG Y G++G+
Sbjct: 144 EILHFARNLPENSTLGEVLGPYVGRVGE 171
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +1
Query: 214 PIRAFFKFRSLTQQDPKQEGRDSRQRNRRTSWRIAGTEADPVENTLF 354
PI FFK R+ TQ DP+ E + S Q+NRR SWR+A T DP + F
Sbjct: 77 PILRFFKSRTSTQ-DPRFESKFSLQKNRRPSWRLAST-TDPESDAEF 121
>ref|XP_021807656.1| pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Prunus avium]
Length = 722
Score = 44.7 bits (104), Expect(2) = 2e-08
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +1
Query: 214 PIRAFFKFRSLTQQDPKQEGRDSRQRNRRTSWRIA 318
PI FFK RS TQ DP++EG+ S Q+NRR+SWR+A
Sbjct: 99 PILRFFKSRSSTQ-DPQREGKLSLQKNRRSSWRLA 132
Score = 41.2 bits (95), Expect(2) = 2e-08
Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +2
Query: 407 DSRGGDSE-VEEILRVSRNLPENSTLGEHLGSYAGKIGK 520
DSR E VEEIL+ +R LP+N TLGE LG + G++G+
Sbjct: 164 DSRALSEEIVEEILQKARTLPQNLTLGEVLGGFEGRVGE 202
>ref|XP_008239377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Prunus mume]
Length = 722
Score = 44.7 bits (104), Expect(2) = 2e-08
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +1
Query: 214 PIRAFFKFRSLTQQDPKQEGRDSRQRNRRTSWRIA 318
PI FFK RS TQ DP++EG+ S Q+NRR+SWR+A
Sbjct: 99 PILRFFKSRSSTQ-DPQREGKLSLQKNRRSSWRLA 132
Score = 41.2 bits (95), Expect(2) = 2e-08
Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +2
Query: 407 DSRGGDSE-VEEILRVSRNLPENSTLGEHLGSYAGKIGK 520
DSR E VEEIL+ +R LP+N TLGE LG + G++G+
Sbjct: 164 DSRALSEEIVEEILQKARTLPQNLTLGEVLGGFEGRVGE 202
>gb|OWM65464.1| hypothetical protein CDL15_Pgr009054 [Punica granatum]
Length = 718
Score = 43.9 bits (102), Expect(2) = 5e-08
Identities = 27/65 (41%), Positives = 32/65 (49%)
Frame = +1
Query: 124 EQDQSYRQEELLXXXXXXXXXXXXXXXXXXPIRAFFKFRSLTQQDPKQEGRDSRQRNRRT 303
EQDQ Q E PIR FFK R+ TQ DP E R S Q+NRR+
Sbjct: 64 EQDQDGEQAEPEEDGVEGGDGEVDEEDDDDPIRRFFKSRATTQ-DPPLEARFSLQKNRRS 122
Query: 304 SWRIA 318
SWR++
Sbjct: 123 SWRLS 127
Score = 40.8 bits (94), Expect(2) = 5e-08
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 437 EILRVSRNLPENSTLGEHLGSYAGKI 514
EILR++R+LPENSTLGE LG + G I
Sbjct: 166 EILRIARDLPENSTLGEFLGDFNGSI 191
>gb|PKI66629.1| hypothetical protein CRG98_012971, partial [Punica granatum]
Length = 415
Score = 43.9 bits (102), Expect(2) = 5e-08
Identities = 27/65 (41%), Positives = 32/65 (49%)
Frame = +1
Query: 124 EQDQSYRQEELLXXXXXXXXXXXXXXXXXXPIRAFFKFRSLTQQDPKQEGRDSRQRNRRT 303
EQDQ Q E PIR FFK R+ TQ DP E R S Q+NRR+
Sbjct: 64 EQDQDGEQAEPEEDGVEGGDGEVDEEDDDDPIRRFFKSRATTQ-DPPLEARFSLQKNRRS 122
Query: 304 SWRIA 318
SWR++
Sbjct: 123 SWRLS 127
Score = 40.8 bits (94), Expect(2) = 5e-08
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 437 EILRVSRNLPENSTLGEHLGSYAGKI 514
EILR++R+LPENSTLGE LG + G I
Sbjct: 166 EILRIARDLPENSTLGEFLGDFNGSI 191
>ref|XP_023001232.1| pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Cucurbita maxima]
Length = 723
Score = 43.1 bits (100), Expect(2) = 6e-08
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +1
Query: 214 PIRAFFKFRSLTQQDPKQEGRDSRQRNRRTSWRIAGTEADPVENTLFLDD 363
P+ FFK R+ T QDP E + S Q+NRR+SW +A VE + DD
Sbjct: 101 PLVRFFKSRNSTTQDPLPESKLSLQKNRRSSWHLASEVECSVEAEIAPDD 150
Score = 41.2 bits (95), Expect(2) = 6e-08
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 422 DSEVEEILRVSRNLPENSTLGEHLGSYAGKI 514
D V +I+R +RNLP+N+TLGE LG + GKI
Sbjct: 167 DGVVGDIVRTARNLPQNTTLGEALGDFEGKI 197