BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00015449
         (498 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020245879.1| pentatricopeptide repeat-containing protein ...    92   2e-18
ref|XP_020245878.1| pentatricopeptide repeat-containing protein ...    92   2e-18
ref|XP_010912918.2| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
ref|XP_009415073.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07
ref|XP_008808163.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_008808162.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06

>ref|XP_020245879.1| pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic isoform X2 [Asparagus officinalis]
          Length = 695

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 46/76 (60%), Positives = 55/76 (72%)
 Frame = +2

Query: 269 PIRAFFRFRSHTQPDPEQEGRASRQRNRRTSWRIAEIEADPVETTPFLDDPEAELASSEA 448
           PIR FF+ RS T  +P+QEGR + QRNRRTSWRIA+ EADP+   P  DDPEAEL  S  
Sbjct: 86  PIRVFFKSRSQTL-NPKQEGRVTLQRNRRTSWRIAQTEADPLGKNPSFDDPEAELVDSSE 144

Query: 449 SVDTGSDSVVEEILRV 496
            V+ GS  +VEEIL+V
Sbjct: 145 EVEVGSFGIVEEILKV 160


>ref|XP_020245878.1| pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic isoform X1 [Asparagus officinalis]
 gb|ONK58111.1| uncharacterized protein A4U43_C09F8240 [Asparagus officinalis]
          Length = 699

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 46/76 (60%), Positives = 55/76 (72%)
 Frame = +2

Query: 269 PIRAFFRFRSHTQPDPEQEGRASRQRNRRTSWRIAEIEADPVETTPFLDDPEAELASSEA 448
           PIR FF+ RS T  +P+QEGR + QRNRRTSWRIA+ EADP+   P  DDPEAEL  S  
Sbjct: 86  PIRVFFKSRSQTL-NPKQEGRVTLQRNRRTSWRIAQTEADPLGKNPSFDDPEAELVDSSE 144

Query: 449 SVDTGSDSVVEEILRV 496
            V+ GS  +VEEIL+V
Sbjct: 145 EVEVGSFGIVEEILKV 160


>ref|XP_010912918.2| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic [Elaeis guineensis]
          Length = 779

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
 Frame = +2

Query: 269 PIRAFFRFRSHTQPDPEQEGRASRQRNRRTSWRIAEIEADPVETTPFLDDPEAELASSEA 448
           PI  FF+ RS TQ DP++EGR + QRNRR+SW IA+ E+D +E     +D +A    S++
Sbjct: 159 PILNFFKSRSETQ-DPKREGRLTLQRNRRSSWHIADFESDDLEEEEEEEDVQAVELDSDS 217

Query: 449 SV--DTGSDSVVEEILRV 496
            V   T  D VV +I+ +
Sbjct: 218 GVPEPTSEDGVVGKIMGI 235


>ref|XP_009415073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 734

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
 Frame = +2

Query: 269 PIRAFFRFRSHTQPD-PEQEGRASRQRNRRTSWRIAEIEADPVETTPFLDDPEAELASSE 445
           PI  FFRFRS +  D P+Q+GR S QRNRRTSW IA I++  ++     D+ +     S 
Sbjct: 115 PILEFFRFRSSSSADDPKQDGRLSLQRNRRTSWHIANIDSADLDHDGLEDEGQVLEPPSP 174

Query: 446 ASVDTGSDSVVEEILRV 496
           +      D VV EIL V
Sbjct: 175 SPPQPAEDGVVAEILGV 191


>ref|XP_008808163.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic isoform X2 [Phoenix dactylifera]
          Length = 744

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/72 (43%), Positives = 47/72 (65%)
 Frame = +2

Query: 269 PIRAFFRFRSHTQPDPEQEGRASRQRNRRTSWRIAEIEADPVETTPFLDDPEAELASSEA 448
           PIR FF+ RS T+ DP++EGR + QRNRR++W IA++++D +E     ++ E E      
Sbjct: 121 PIRNFFKSRSETR-DPKREGRLTLQRNRRSTWHIADLQSDDIE-----EEEEEEEEEEVQ 174

Query: 449 SVDTGSDSVVEE 484
           +V+  SDS V E
Sbjct: 175 AVEPDSDSGVPE 186


>ref|XP_008808162.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic isoform X1 [Phoenix dactylifera]
          Length = 756

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/72 (43%), Positives = 47/72 (65%)
 Frame = +2

Query: 269 PIRAFFRFRSHTQPDPEQEGRASRQRNRRTSWRIAEIEADPVETTPFLDDPEAELASSEA 448
           PIR FF+ RS T+ DP++EGR + QRNRR++W IA++++D +E     ++ E E      
Sbjct: 121 PIRNFFKSRSETR-DPKREGRLTLQRNRRSTWHIADLQSDDIE-----EEEEEEEEEEVQ 174

Query: 449 SVDTGSDSVVEE 484
           +V+  SDS V E
Sbjct: 175 AVEPDSDSGVPE 186