BLASTX nr result

ID: Ophiopogon24_contig00014858 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00014858
         (823 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020257602.1| remorin 4.1-like isoform X2 [Asparagus offic...    68   1e-09
ref|XP_020257601.1| remorin 4.1-like isoform X1 [Asparagus offic...    66   1e-08
ref|XP_020276791.1| caldesmon-like isoform X1 [Asparagus officin...    57   8e-06

>ref|XP_020257602.1| remorin 4.1-like isoform X2 [Asparagus officinalis]
          Length = 249

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/49 (65%), Positives = 36/49 (73%)
 Frame = -1

Query: 823 GSVKFSGVSLPKTRSRNEDTNAKPTSFSGSFKRWFSDQEPKEDGKPEGT 677
           GSVKFS  +LPK +SRNED   K  SF GSFK+WFSDQ  KED KP G+
Sbjct: 38  GSVKFSEETLPKAKSRNEDAKVKLNSFRGSFKKWFSDQGAKEDEKPGGS 86


>ref|XP_020257601.1| remorin 4.1-like isoform X1 [Asparagus officinalis]
 gb|ONK75773.1| uncharacterized protein A4U43_C03F20400 [Asparagus officinalis]
          Length = 301

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 31/46 (67%), Positives = 34/46 (73%)
 Frame = -1

Query: 823 GSVKFSGVSLPKTRSRNEDTNAKPTSFSGSFKRWFSDQEPKEDGKP 686
           GSVKFS  +LPK +SRNED   K  SF GSFK+WFSDQ  KED KP
Sbjct: 38  GSVKFSEETLPKAKSRNEDAKVKLNSFRGSFKKWFSDQGAKEDEKP 83


>ref|XP_020276791.1| caldesmon-like isoform X1 [Asparagus officinalis]
 gb|ONK64810.1| uncharacterized protein A4U43_C07F30190 [Asparagus officinalis]
          Length = 228

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 29/49 (59%), Positives = 33/49 (67%)
 Frame = -1

Query: 823 GSVKFSGVSLPKTRSRNEDTNAKPTSFSGSFKRWFSDQEPKEDGKPEGT 677
           GSVKFSG         NED   K +SFSGSFKRWF+DQ  +EDGKP G+
Sbjct: 37  GSVKFSG-----DHFGNEDDRKKLSSFSGSFKRWFTDQAAREDGKPGGS 80


Top