BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00014655
         (1520 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 ...   636   0.0  
ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 ...   636   0.0  
ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 ...   626   0.0  
ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB ...   551   0.0  
ref|XP_010918654.1| PREDICTED: RNA polymerase sigma factor sigB ...   540   0.0  
ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-...   535   0.0  
ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-...   522   e-178
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-...   511   e-174
ref|XP_011623893.1| RNA polymerase sigma factor sigB [Amborella ...   504   e-171
gb|ERM94758.1| hypothetical protein AMTR_s00011p00258380 [Ambore...   504   e-171
ref|XP_012070322.1| RNA polymerase sigma factor sigB [Jatropha c...   504   e-171
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ...   503   e-171
ref|XP_009408073.1| PREDICTED: RNA polymerase sigma factor sigB-...   500   e-170
ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB ...   500   e-169
ref|XP_021621112.1| RNA polymerase sigma factor sigB isoform X2 ...   499   e-169
ref|XP_021621111.1| RNA polymerase sigma factor sigB isoform X1 ...   499   e-169
ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB ...   497   e-168
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ...   497   e-168
ref|XP_017627350.1| PREDICTED: RNA polymerase sigma factor sigB ...   496   e-168
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ...   497   e-168

>ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 [Asparagus officinalis]
          Length = 554

 Score =  636 bits (1641), Expect = 0.0
 Identities = 346/503 (68%), Positives = 365/503 (72%)
 Frame = +2

Query: 11   RSRCVSSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATWPTXXXX 190
            R++CVSS MTAVI+LDKTYVPTL+AHT SS VT+ LSYVGAIGPP+KTDYK TW      
Sbjct: 30   RNQCVSSLMTAVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDYKTTWHAETLL 89

Query: 191  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXXX 370
                                         QMI  D  VKLEK+E FPSQA I Q      
Sbjct: 90   TREEATIAAAAAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQADIRQLKRPTL 149

Query: 371  XXXXXXXMMNTPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEX 550
                     N  E    EG    NQ KDEGISSL LNE DLQ+ Q+SENITVRS RQ E 
Sbjct: 150  TELELLDTTNNQE----EGHNTPNQSKDEGISSLMLNEPDLQRMQESENITVRSMRQSER 205

Query: 551  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXXXXXXXXXXX 730
                                           QE+DYSDPLRYLRG               
Sbjct: 206  RARRAKAAEKAANNVISVKSGTSGKKKRSAAQEIDYSDPLRYLRGTTSNSKLLTADEELE 265

Query: 731  XXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSN 910
               GIQDLIKLESLQ EL ER G+PPTFAQWA AA VD RTLR RLNYGR CKDKMIKSN
Sbjct: 266  LSEGIQDLIKLESLQAELTERYGNPPTFAQWAMAARVDTRTLRKRLNYGRYCKDKMIKSN 325

Query: 911  IRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSL 1090
            IRLVISIAKNFQG+GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSL
Sbjct: 326  IRLVISIAKNFQGSGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSL 385

Query: 1091 SDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRLSAVMLIPKA 1270
            SDQSRTIRLPFHMVEATYRVREARKQLYSENGR P+DEEI EATGLTMKRL+AVMLIPKA
Sbjct: 386  SDQSRTIRLPFHMVEATYRVREARKQLYSENGRHPDDEEIAEATGLTMKRLTAVMLIPKA 445

Query: 1271 PRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRF 1450
            PRSL+QKIGINQTLKPSEVI+DPDALTTEEILV+QLMKQDLNKVLDSLNPREKQV+RWRF
Sbjct: 446  PRSLEQKIGINQTLKPSEVISDPDALTTEEILVKQLMKQDLNKVLDSLNPREKQVVRWRF 505

Query: 1451 GLEDGRIKTLQEIGELMGVSRER 1519
            GLEDGR+KTLQEIGELMGVSRER
Sbjct: 506  GLEDGRMKTLQEIGELMGVSRER 528


>ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 [Asparagus officinalis]
 gb|ONK58877.1| uncharacterized protein A4U43_C08F650 [Asparagus officinalis]
          Length = 557

 Score =  636 bits (1641), Expect = 0.0
 Identities = 346/503 (68%), Positives = 365/503 (72%)
 Frame = +2

Query: 11   RSRCVSSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATWPTXXXX 190
            R++CVSS MTAVI+LDKTYVPTL+AHT SS VT+ LSYVGAIGPP+KTDYK TW      
Sbjct: 33   RNQCVSSLMTAVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDYKTTWHAETLL 92

Query: 191  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXXX 370
                                         QMI  D  VKLEK+E FPSQA I Q      
Sbjct: 93   TREEATIAAAAAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQADIRQLKRPTL 152

Query: 371  XXXXXXXMMNTPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEX 550
                     N  E    EG    NQ KDEGISSL LNE DLQ+ Q+SENITVRS RQ E 
Sbjct: 153  TELELLDTTNNQE----EGHNTPNQSKDEGISSLMLNEPDLQRMQESENITVRSMRQSER 208

Query: 551  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXXXXXXXXXXX 730
                                           QE+DYSDPLRYLRG               
Sbjct: 209  RARRAKAAEKAANNVISVKSGTSGKKKRSAAQEIDYSDPLRYLRGTTSNSKLLTADEELE 268

Query: 731  XXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSN 910
               GIQDLIKLESLQ EL ER G+PPTFAQWA AA VD RTLR RLNYGR CKDKMIKSN
Sbjct: 269  LSEGIQDLIKLESLQAELTERYGNPPTFAQWAMAARVDTRTLRKRLNYGRYCKDKMIKSN 328

Query: 911  IRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSL 1090
            IRLVISIAKNFQG+GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSL
Sbjct: 329  IRLVISIAKNFQGSGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSL 388

Query: 1091 SDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRLSAVMLIPKA 1270
            SDQSRTIRLPFHMVEATYRVREARKQLYSENGR P+DEEI EATGLTMKRL+AVMLIPKA
Sbjct: 389  SDQSRTIRLPFHMVEATYRVREARKQLYSENGRHPDDEEIAEATGLTMKRLTAVMLIPKA 448

Query: 1271 PRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRF 1450
            PRSL+QKIGINQTLKPSEVI+DPDALTTEEILV+QLMKQDLNKVLDSLNPREKQV+RWRF
Sbjct: 449  PRSLEQKIGINQTLKPSEVISDPDALTTEEILVKQLMKQDLNKVLDSLNPREKQVVRWRF 508

Query: 1451 GLEDGRIKTLQEIGELMGVSRER 1519
            GLEDGR+KTLQEIGELMGVSRER
Sbjct: 509  GLEDGRMKTLQEIGELMGVSRER 531


>ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 [Asparagus officinalis]
          Length = 517

 Score =  626 bits (1615), Expect = 0.0
 Identities = 341/495 (68%), Positives = 358/495 (72%)
 Frame = +2

Query: 35   MTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXX 214
            MTAVI+LDKTYVPTL+AHT SS VT+ LSYVGAIGPP+KTDYK TW              
Sbjct: 1    MTAVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDYKTTWHAETLLTREEATIA 60

Query: 215  XXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXXXXXXXXXXM 394
                                 QMI  D  VKLEK+E FPSQA I Q              
Sbjct: 61   AAAAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDT 120

Query: 395  MNTPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXX 574
             N  E    EG    NQ KDEGISSL LNE DLQ+ Q+SENITVRS RQ E         
Sbjct: 121  TNNQE----EGHNTPNQSKDEGISSLMLNEPDLQRMQESENITVRSMRQSERRARRAKAA 176

Query: 575  XXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXXGIQDL 754
                                   QE+DYSDPLRYLRG                  GIQDL
Sbjct: 177  EKAANNVISVKSGTSGKKKRSAAQEIDYSDPLRYLRGTTSNSKLLTADEELELSEGIQDL 236

Query: 755  IKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIA 934
            IKLESLQ EL ER G+PPTFAQWA AA VD RTLR RLNYGR CKDKMIKSNIRLVISIA
Sbjct: 237  IKLESLQAELTERYGNPPTFAQWAMAARVDTRTLRKRLNYGRYCKDKMIKSNIRLVISIA 296

Query: 935  KNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 1114
            KNFQG+GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR
Sbjct: 297  KNFQGSGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 356

Query: 1115 LPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRLSAVMLIPKAPRSLDQKI 1294
            LPFHMVEATYRVREARKQLYSENGR P+DEEI EATGLTMKRL+AVMLIPKAPRSL+QKI
Sbjct: 357  LPFHMVEATYRVREARKQLYSENGRHPDDEEIAEATGLTMKRLTAVMLIPKAPRSLEQKI 416

Query: 1295 GINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIK 1474
            GINQTLKPSEVI+DPDALTTEEILV+QLMKQDLNKVLDSLNPREKQV+RWRFGLEDGR+K
Sbjct: 417  GINQTLKPSEVISDPDALTTEEILVKQLMKQDLNKVLDSLNPREKQVVRWRFGLEDGRMK 476

Query: 1475 TLQEIGELMGVSRER 1519
            TLQEIGELMGVSRER
Sbjct: 477  TLQEIGELMGVSRER 491


>ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB [Phoenix dactylifera]
          Length = 566

 Score =  551 bits (1419), Expect = 0.0
 Identities = 301/504 (59%), Positives = 341/504 (67%)
 Frame = +2

Query: 8    FRSRCVSSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATWPTXXX 187
            FRS CVS+   AVID+ +  +P+LEAH+TS   T+ L+YVGA+GPP KT  +AT  T   
Sbjct: 38   FRSPCVSTLTAAVIDIQR--IPSLEAHSTSLDATRPLTYVGAVGPPMKTSIEATLATETL 95

Query: 188  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXX 367
                                          Q+IGND SVKLEKSE F S+A  F+     
Sbjct: 96   LTGEEAVIAAAAAEAVALARAAVEVAKDAAQIIGNDPSVKLEKSEDFSSEADAFRLERVR 155

Query: 368  XXXXXXXXMMNTPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIE 547
                      N       E     +  +   +S+L   EL+ QQ Q  E+I VRS RQ +
Sbjct: 156  LTEMELIRTTNNSTPTDTEPHEAKDPSQGTDVSNLTHKELESQQMQYPESIAVRSGRQTD 215

Query: 548  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXXXXXXXXXX 727
                                            QEVDYSDPLRYLRG              
Sbjct: 216  RKARRTRAAEKAAVSVIPVKSGSTSKKKRSTFQEVDYSDPLRYLRGTTSTSKLLTAAEEL 275

Query: 728  XXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKS 907
                 IQD++KLE LQ+ELAER+G  PTFAQWA AAGVD RTLR RLNYGR CKDKMIKS
Sbjct: 276  ELSEAIQDMLKLERLQQELAERHGGQPTFAQWAAAAGVDQRTLRKRLNYGRFCKDKMIKS 335

Query: 908  NIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKS 1087
            NIRLVISIAKN+QGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR+S
Sbjct: 336  NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRS 395

Query: 1088 LSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRLSAVMLIPK 1267
            LS+QSRTIRLPFHMVEATYRVREA+KQLYSENGR P+ +E+ EATGL+MKRL+AVML PK
Sbjct: 396  LSEQSRTIRLPFHMVEATYRVREAKKQLYSENGRYPDYQEVAEATGLSMKRLNAVMLTPK 455

Query: 1268 APRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWR 1447
            APRSLDQKIGINQ+LKPSEVIADP+A T+EEIL++Q  KQDLNKVLD+LNPREKQV+RWR
Sbjct: 456  APRSLDQKIGINQSLKPSEVIADPEAETSEEILIKQFRKQDLNKVLDTLNPREKQVVRWR 515

Query: 1448 FGLEDGRIKTLQEIGELMGVSRER 1519
            FGLEDG  KTLQEIGELMGVSRER
Sbjct: 516  FGLEDGMTKTLQEIGELMGVSRER 539


>ref|XP_010918654.1| PREDICTED: RNA polymerase sigma factor sigB [Elaeis guineensis]
          Length = 566

 Score =  540 bits (1391), Expect = 0.0
 Identities = 302/507 (59%), Positives = 344/507 (67%), Gaps = 3/507 (0%)
 Frame = +2

Query: 8    FRSRCVSSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATWPTXXX 187
            FRS+CVS+Q  AVID+ +  +P+LEA + S   T+ L+YVG++GPP KT  +AT  T   
Sbjct: 38   FRSQCVSTQTAAVIDIQR--IPSLEARSNSLDDTRPLTYVGSVGPPMKTGIEATLATETL 95

Query: 188  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIF--QSXX 361
                                          Q+I ND SVKLEKSE F S+A  F  +   
Sbjct: 96   LTGEEAVVAAAAAEAVALARAAVEVAKDAAQIIRNDPSVKLEKSEDFSSEADAFWLERVR 155

Query: 362  XXXXXXXXXXMMNTP-ETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWR 538
                        +TP +T+  E +  S   +D  +S+L  NEL  QQ Q  E+I VRS R
Sbjct: 156  HNEMGLIRTTHHSTPTDTEPHEAKDPS---QDIDVSNLTNNELQSQQMQYPESIAVRSGR 212

Query: 539  QIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXXXXXXX 718
            Q E                                QE+DYSDPL YLRG           
Sbjct: 213  QTERKARRARAEEKAAVSVIPIKSGSSSKKKRSAFQEIDYSDPLHYLRGTTSTSKLLTAA 272

Query: 719  XXXXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKM 898
                   GIQDL+KLE L+EELAER+G  PTFAQWA AAGVD RTLR RLNYG  CKDKM
Sbjct: 273  EELELSKGIQDLLKLEKLREELAERHGGQPTFAQWAAAAGVDQRTLRKRLNYGGFCKDKM 332

Query: 899  IKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAV 1078
            IKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGLVKGAE+FDA KGFKFSTYAHWWIKQAV
Sbjct: 333  IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAERFDALKGFKFSTYAHWWIKQAV 392

Query: 1079 RKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRLSAVML 1258
            R+SLS+QSRTIRLP HMVEATYRVREA+KQLYSENGR P+ EE+ EATGL+MKRL+AVML
Sbjct: 393  RRSLSEQSRTIRLPIHMVEATYRVREAKKQLYSENGRHPDYEEVAEATGLSMKRLNAVML 452

Query: 1259 IPKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVL 1438
             PKAPRSLDQKIGINQ+LKPSEVIADP A T+EEIL++Q MKQDLNKVLD+LNPREKQV+
Sbjct: 453  TPKAPRSLDQKIGINQSLKPSEVIADPKAETSEEILIKQFMKQDLNKVLDTLNPREKQVV 512

Query: 1439 RWRFGLEDGRIKTLQEIGELMGVSRER 1519
            RWRFGLEDG  KTLQEIGELMGVSRER
Sbjct: 513  RWRFGLEDGMTKTLQEIGELMGVSRER 539


>ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-like [Elaeis guineensis]
          Length = 555

 Score =  535 bits (1379), Expect = 0.0
 Identities = 300/504 (59%), Positives = 338/504 (67%)
 Frame = +2

Query: 8    FRSRCVSSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATWPTXXX 187
            FRS+CVS+   AVID++  ++ +LEA +TS   T+ L+YVGAIGPP KT+ +AT  T   
Sbjct: 38   FRSQCVSTPTAAVIDME--HILSLEARSTSLAATRPLTYVGAIGPPTKTNMEATLATEAL 95

Query: 188  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXX 367
                                            I ND SVKLEKS  F S+A I Q     
Sbjct: 96   LTGEEAIIAAAAAEAVALARTAVEAAKDAALTIANDPSVKLEKSLDFSSEADILQ----- 150

Query: 368  XXXXXXXXMMNTPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIE 547
                         +T   E     +  +D  IS+L  NEL+ Q+   S +I VRS RQ E
Sbjct: 151  ------LERSTATDTKPHEEHLAKDPSQDVDISNLIHNELEPQKMHYSGSIAVRSGRQTE 204

Query: 548  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXXXXXXXXXX 727
                                            QE+DYSDPLRYLRG              
Sbjct: 205  RIARRARAAERAASSVIPVKSGSSSKKKRSAFQEIDYSDPLRYLRGTTSTSKLLTAAEEL 264

Query: 728  XXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKS 907
                GIQDL+KLE L+EEL ERNG+ PT AQWA AAGVD RTLR RLNYG  CKDKMI S
Sbjct: 265  ELSEGIQDLLKLERLREELEERNGAQPTLAQWAAAAGVDQRTLRKRLNYGTFCKDKMITS 324

Query: 908  NIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKS 1087
            NIRLVISIAKN+QGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR+S
Sbjct: 325  NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRS 384

Query: 1088 LSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRLSAVMLIPK 1267
            LS+QSRTIRLPFHMVEATYRVR+A KQLY+ENGR P+ EEI EATGL+MKRL+AVMLIPK
Sbjct: 385  LSEQSRTIRLPFHMVEATYRVRQAEKQLYNENGRHPDYEEIAEATGLSMKRLNAVMLIPK 444

Query: 1268 APRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWR 1447
            APRSLDQKIGINQ+LKPSEVIADP A T+EEIL++Q MKQDLNKVL+SLNPREKQV+RWR
Sbjct: 445  APRSLDQKIGINQSLKPSEVIADPKAETSEEILIKQFMKQDLNKVLNSLNPREKQVIRWR 504

Query: 1448 FGLEDGRIKTLQEIGELMGVSRER 1519
            FGLEDG  KTLQEIGELMGVSRER
Sbjct: 505  FGLEDGMTKTLQEIGELMGVSRER 528


>ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
            subsp. malaccensis]
          Length = 567

 Score =  522 bits (1345), Expect = e-178
 Identities = 291/509 (57%), Positives = 339/509 (66%), Gaps = 5/509 (0%)
 Frame = +2

Query: 8    FRSRCVSSQMTAVIDLDKTYVPTLEAHTTSSGVT--QRLSYVGAIGPPAKTDYKATWPTX 181
            FRSRCV S  TAVID ++  +P LEAH+TSS     + L+Y G++GPP KT  +AT  + 
Sbjct: 34   FRSRCVLSPTTAVIDFEQ--IPKLEAHSTSSSTCAIRPLTYSGSVGPPIKTSIEATLASE 91

Query: 182  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXX 361
                                            QMIG + S ++EK E  PS+A I     
Sbjct: 92   TLLQCDEAVIAAAAAEAVALARAALELAKDAAQMIGKNLSAEVEKLEETPSEADIKWLER 151

Query: 362  XXXXXXXXXXMMNTP---ETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRS 532
                        N P   ET   E   + +Q+    ISS   +E + Q  Q  ENI VRS
Sbjct: 152  VSLTETEWAGFTNHPAATETIPFEYNVSLDQYASTDISSSTFDEPEFQGMQHIENIAVRS 211

Query: 533  WRQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXXXXX 712
             RQIE                                QE+DYSDPLRYLRG         
Sbjct: 212  GRQIERRARRARAADKATAGVISLKSGSSGKKKRSAFQEIDYSDPLRYLRGTTSTSKLLT 271

Query: 713  XXXXXXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKD 892
                     GIQ L+KLE LQ++LAERNG  PTFAQWA AAG+D +TLR R+N+G  CKD
Sbjct: 272  AAEEIELSEGIQSLLKLERLQQDLAERNGCQPTFAQWAAAAGIDQKTLRKRINHGTYCKD 331

Query: 893  KMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQ 1072
            KMIKSNIRLVISIAKN+QGAG+NLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQ
Sbjct: 332  KMIKSNIRLVISIAKNYQGAGINLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQ 391

Query: 1073 AVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRLSAV 1252
            AVRKSLS+QSRTIRLPFHMVEATYRVREA+K+LYSENGR P++EE+ EA GL+MKRL+AV
Sbjct: 392  AVRKSLSEQSRTIRLPFHMVEATYRVREAKKKLYSENGRHPDNEEVAEAAGLSMKRLAAV 451

Query: 1253 MLIPKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQ 1432
            ML PKAPRSLDQKIGINQ+LK SEVIADP A T+E+IL++Q M++DLNKVLD+LN REKQ
Sbjct: 452  MLTPKAPRSLDQKIGINQSLKASEVIADPAAKTSEDILMKQFMREDLNKVLDTLNLREKQ 511

Query: 1433 VLRWRFGLEDGRIKTLQEIGELMGVSRER 1519
            V+RWRFGL+DGR+KTLQEIGELMGVSRER
Sbjct: 512  VVRWRFGLDDGRMKTLQEIGELMGVSRER 540


>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
          Length = 572

 Score =  511 bits (1315), Expect = e-174
 Identities = 288/510 (56%), Positives = 327/510 (64%), Gaps = 6/510 (1%)
 Frame = +2

Query: 8    FRSRCVSSQMTA-----VIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATW 172
            FR++C+ S  TA     V+D +K  +P+LEAH  S    + L+Y+GAI PP K  ++AT 
Sbjct: 42   FRTQCILSTTTATMTTTVVDDEKLRMPSLEAHLISVPADRPLTYIGAIDPPTKAKFEATL 101

Query: 173  PTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEK-SEGFPSQAGIF 349
             T                                  M+  + S K +K     PS+   +
Sbjct: 102  ATEPLITGDEALIAAAAVEAVALAKAAVEIAKDAALMVSTNPSSKSDKWPPDIPSELDTY 161

Query: 350  QSXXXXXXXXXXXXMMNTPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVR 529
                          M+      H      S   +D         EL L Q Q S++I VR
Sbjct: 162  WHETAQLNEIEQVDMV------HHSLGAESRPKEDSDYLDPTDEELKLLQMQLSKSIAVR 215

Query: 530  SWRQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXXXX 709
            S RQ E                                Q+VDYSDPLRYLRG        
Sbjct: 216  SGRQTERRARRARAAEKVAANVVAVKSGSSSRKKRSALQDVDYSDPLRYLRGTTSTSRLL 275

Query: 710  XXXXXXXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCK 889
                      GIQDL+KLE L EELAER G  PTFAQWA AAG+D +TLR RLNYG  CK
Sbjct: 276  TATEELEFSEGIQDLLKLEKLYEELAERYGGQPTFAQWAAAAGIDQKTLRKRLNYGILCK 335

Query: 890  DKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIK 1069
            DKMIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIK
Sbjct: 336  DKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIK 395

Query: 1070 QAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRLSA 1249
            QAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGR P++EE+ EATGL+MKRL+A
Sbjct: 396  QAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTA 455

Query: 1250 VMLIPKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREK 1429
            V+L PKAPRSLDQKIGINQ LKPSEVIADPDA TTEE+L+++ MKQDL KVLDSLNPREK
Sbjct: 456  VLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETTEELLMKKFMKQDLEKVLDSLNPREK 515

Query: 1430 QVLRWRFGLEDGRIKTLQEIGELMGVSRER 1519
            QV+RWRFGLEDGR+KTLQEIGELMGVSRER
Sbjct: 516  QVIRWRFGLEDGRMKTLQEIGELMGVSRER 545


>ref|XP_011623893.1| RNA polymerase sigma factor sigB [Amborella trichopoda]
          Length = 563

 Score =  504 bits (1299), Expect = e-171
 Identities = 276/512 (53%), Positives = 328/512 (64%), Gaps = 8/512 (1%)
 Frame = +2

Query: 8    FRSRCVSSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATWPTXXX 187
            F+++CVSS  T V+D+DK  VP+L  H+TS      L+YVG IG   KTD++A   T   
Sbjct: 27   FQTQCVSSTATVVVDVDKVRVPSLGGHSTSVSTHGPLTYVGTIGSQKKTDFEAALVTESL 86

Query: 188  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXX 367
                                           M+G+    + +K + FPS+A I +     
Sbjct: 87   LKSEEAIIAAAAAEAIALAKAAAKLAKDAALMVGSVPPSRSDKVDDFPSEADILRLQRAR 146

Query: 368  XXXXXXXXMMNT-------PETDHQE-GRTNSNQFKDEGISSLRLNELDLQQTQDSENIT 523
                     M+        P   H+   + + N+  D+     R N L+  Q Q S+ + 
Sbjct: 147  LTEMERIGSMDGSSIAGIGPRDKHKSVNQLSPNEMADK---QSRENILEALQLQHSQRVA 203

Query: 524  VRSWRQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXX 703
            VRS RQ E                                QE+DYSDPLRYLRG      
Sbjct: 204  VRSRRQTERRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYSDPLRYLRGTTNSTK 263

Query: 704  XXXXXXXXXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRS 883
                        GIQDL+KLE L +EL ER G  PTF QWA AAG+D + LR RL+YG  
Sbjct: 264  LLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALRRRLSYGTH 323

Query: 884  CKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWW 1063
            CKDKMIKSNIRLVISIAKN+QG G+++QDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWW
Sbjct: 324  CKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 383

Query: 1064 IKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRL 1243
            IKQAVRKSLSDQSRTIRLPFHMV+ATYRVREA KQLYSENGR PNDEE+ EATGL+MKRL
Sbjct: 384  IKQAVRKSLSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEATGLSMKRL 443

Query: 1244 SAVMLIPKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPR 1423
            + V+L PKAPRSLDQKIGINQ LKPSEVI+DP+A T E++L++Q MKQDL KVL++LNPR
Sbjct: 444  TTVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLMKQFMKQDLEKVLNTLNPR 503

Query: 1424 EKQVLRWRFGLEDGRIKTLQEIGELMGVSRER 1519
            EKQV+RWRFGLEDGR+KTLQEIGELMGVSRER
Sbjct: 504  EKQVVRWRFGLEDGRMKTLQEIGELMGVSRER 535


>gb|ERM94758.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  504 bits (1299), Expect = e-171
 Identities = 276/512 (53%), Positives = 328/512 (64%), Gaps = 8/512 (1%)
 Frame = +2

Query: 8    FRSRCVSSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATWPTXXX 187
            F+++CVSS  T V+D+DK  VP+L  H+TS      L+YVG IG   KTD++A   T   
Sbjct: 34   FQTQCVSSTATVVVDVDKVRVPSLGGHSTSVSTHGPLTYVGTIGSQKKTDFEAALVTESL 93

Query: 188  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXX 367
                                           M+G+    + +K + FPS+A I +     
Sbjct: 94   LKSEEAIIAAAAAEAIALAKAAAKLAKDAALMVGSVPPSRSDKVDDFPSEADILRLQRAR 153

Query: 368  XXXXXXXXMMNT-------PETDHQE-GRTNSNQFKDEGISSLRLNELDLQQTQDSENIT 523
                     M+        P   H+   + + N+  D+     R N L+  Q Q S+ + 
Sbjct: 154  LTEMERIGSMDGSSIAGIGPRDKHKSVNQLSPNEMADK---QSRENILEALQLQHSQRVA 210

Query: 524  VRSWRQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXX 703
            VRS RQ E                                QE+DYSDPLRYLRG      
Sbjct: 211  VRSRRQTERRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYSDPLRYLRGTTNSTK 270

Query: 704  XXXXXXXXXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRS 883
                        GIQDL+KLE L +EL ER G  PTF QWA AAG+D + LR RL+YG  
Sbjct: 271  LLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALRRRLSYGTH 330

Query: 884  CKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWW 1063
            CKDKMIKSNIRLVISIAKN+QG G+++QDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWW
Sbjct: 331  CKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 390

Query: 1064 IKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRL 1243
            IKQAVRKSLSDQSRTIRLPFHMV+ATYRVREA KQLYSENGR PNDEE+ EATGL+MKRL
Sbjct: 391  IKQAVRKSLSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEATGLSMKRL 450

Query: 1244 SAVMLIPKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPR 1423
            + V+L PKAPRSLDQKIGINQ LKPSEVI+DP+A T E++L++Q MKQDL KVL++LNPR
Sbjct: 451  TTVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLMKQFMKQDLEKVLNTLNPR 510

Query: 1424 EKQVLRWRFGLEDGRIKTLQEIGELMGVSRER 1519
            EKQV+RWRFGLEDGR+KTLQEIGELMGVSRER
Sbjct: 511  EKQVVRWRFGLEDGRMKTLQEIGELMGVSRER 542


>ref|XP_012070322.1| RNA polymerase sigma factor sigB [Jatropha curcas]
 gb|KDP39610.1| hypothetical protein JCGZ_02630 [Jatropha curcas]
          Length = 577

 Score =  504 bits (1298), Expect = e-171
 Identities = 286/511 (55%), Positives = 327/511 (63%), Gaps = 7/511 (1%)
 Frame = +2

Query: 8    FRSRCV-----SSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATW 172
            FR++C+      S  TAV+DL+K  +P+ EAH  S       +YVG+IGPP +T + +T 
Sbjct: 41   FRAQCILSTTSPSTSTAVLDLEKLRLPSFEAHPDSLVANSPWTYVGSIGPPKET-FGSTL 99

Query: 173  PTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQ 352
             T                                  ++ +  S + E     PS A +  
Sbjct: 100  ATETLITGDDAVIAAAAAEAVALARAAAKVAKDAAILVKSFPSSEAESKLEIPSIADVSS 159

Query: 353  SXXXXXXXXXXXXMMN--TPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITV 526
                         + +  T ET  +E     +  K+         EL+L Q Q SE I V
Sbjct: 160  RWPQFTETDRARIIGDSVTAETGSREEHPMQHPTKESDHLEPTHEELELLQKQLSEGIAV 219

Query: 527  RSWRQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXXX 706
            RS RQ E                                QEVDYSDPLRYLRG       
Sbjct: 220  RSRRQTERKERRTRAAEKAAANVMSWKSGSTSKKKRGPLQEVDYSDPLRYLRGTTSTSKL 279

Query: 707  XXXXXXXXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSC 886
                       GIQDL+KLE L EELAER G  PTF QWA AAGVD +TLRTRLNYG SC
Sbjct: 280  LTATEELELSEGIQDLLKLERLHEELAERCGGQPTFQQWAAAAGVDQKTLRTRLNYGISC 339

Query: 887  KDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWI 1066
            KD+MIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWI
Sbjct: 340  KDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI 399

Query: 1067 KQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRLS 1246
            KQAVRKSLSDQSRTIRLPFHMVEATYRV+EARKQLYSENGR P+DEE+ EATGL+MKRLS
Sbjct: 400  KQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRYPDDEEVAEATGLSMKRLS 459

Query: 1247 AVMLIPKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPRE 1426
            AV+L PKAPRSLDQKIGIN  LKPSE+IADPDA T E++L++Q MKQDL KVLDSL+PRE
Sbjct: 460  AVLLTPKAPRSLDQKIGINMDLKPSEIIADPDAETAEDLLMKQFMKQDLEKVLDSLSPRE 519

Query: 1427 KQVLRWRFGLEDGRIKTLQEIGELMGVSRER 1519
             QV+RWRFGLEDGRIKTLQEIGE+MGVSRER
Sbjct: 520  NQVIRWRFGLEDGRIKTLQEIGEIMGVSRER 550


>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
 emb|CBI40014.3| unnamed protein product, partial [Vitis vinifera]
          Length = 575

 Score =  503 bits (1295), Expect = e-171
 Identities = 277/504 (54%), Positives = 330/504 (65%), Gaps = 5/504 (0%)
 Frame = +2

Query: 23   VSSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXX 202
            +S+  TAV+D++K  +P+LE+H+ S    +  +Y+G +GPP + +++AT           
Sbjct: 46   LSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEE 105

Query: 203  XXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLE-KSEGFPSQAGIFQSXXXXXXXX 379
                                     +++G ++S K E K   F S     Q         
Sbjct: 106  AVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTET 165

Query: 380  XXXXMMNTPETDHQEGRTNSNQFKD--EGISSLR--LNELDLQQTQDSENITVRSWRQIE 547
                ++       + G  + N  +D  E    L   L EL+L + + S++I VRS RQ+E
Sbjct: 166  ERIGILGD-SVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVE 224

Query: 548  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXXXXXXXXXX 727
                                            QEVDYSDPLRYLRG              
Sbjct: 225  RKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEEL 284

Query: 728  XXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKS 907
                GIQDL+KLE LQE+L ER G  PTFAQWA AAGVD +TLR R NYG  CKDKMIKS
Sbjct: 285  ELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKS 344

Query: 908  NIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKS 1087
            NIRLVISIAKN+QGAGMN+QDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKS
Sbjct: 345  NIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKS 404

Query: 1088 LSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRLSAVMLIPK 1267
            LSDQSRTIRLPFHMVEATYRV+EARKQLYSENGR PN+EE+ EATGL+MKRL+AV+L PK
Sbjct: 405  LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPK 464

Query: 1268 APRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWR 1447
            APRSLDQKIGINQ LKPSEVIADPDA T EE+L++Q M++DL KVL+SLNPREKQV+RWR
Sbjct: 465  APRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWR 524

Query: 1448 FGLEDGRIKTLQEIGELMGVSRER 1519
            +GLEDGR KTLQEIGELMGVSRER
Sbjct: 525  YGLEDGRTKTLQEIGELMGVSRER 548


>ref|XP_009408073.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
            subsp. malaccensis]
          Length = 553

 Score =  500 bits (1287), Expect = e-170
 Identities = 278/506 (54%), Positives = 326/506 (64%), Gaps = 5/506 (0%)
 Frame = +2

Query: 17   RCVSSQMTAVIDLDKTYVPTLEAHTTSSGVT--QRLSYVGAIGPPAKTDYKATWPTXXXX 190
            RCV S  TA+ID ++  +P LEA +TS      + L+Y GA+G P KT ++ATW +    
Sbjct: 38   RCVLSPKTALIDFEQ--IPKLEARSTSLSTCAIKPLTYTGAVGLPTKTSFEATWASEALL 95

Query: 191  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXXX 370
                                         QMI    S ++E      ++           
Sbjct: 96   TNEEAVIAAAAAEAVALARAALELAKDAAQMIRKSPSAEVENVNLSKTE----------- 144

Query: 371  XXXXXXXMMN---TPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQ 541
                   M N     ET   E     ++   + ISS   NE ++++T+   NI VRS RQ
Sbjct: 145  ----WTGMTNHSVATETTSLEDSVTLDESVRKDISSSTYNETEVEETEYCGNIAVRSGRQ 200

Query: 542  IEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXXXXXXXX 721
             E                                QE+DYSDPL YLRG            
Sbjct: 201  TERRARRARAAEKAAAGVLNLKSGSSGKKKRSTLQEIDYSDPLHYLRGTTSTSRLLTAAE 260

Query: 722  XXXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMI 901
                  GIQDL+KLE LQ++L ERNG  PTFAQWA AAG+D + LR RLNYG  CKDKMI
Sbjct: 261  EVELSEGIQDLLKLERLQQDLTERNGCQPTFAQWAAAAGIDQKVLRKRLNYGTFCKDKMI 320

Query: 902  KSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR 1081
             SNIRLVISIAKN+Q AGMNLQDLVQEGCRGL+KGAEKFDASKGFKFSTYAHWWIKQAVR
Sbjct: 321  TSNIRLVISIAKNYQHAGMNLQDLVQEGCRGLIKGAEKFDASKGFKFSTYAHWWIKQAVR 380

Query: 1082 KSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRLSAVMLI 1261
            KSLS+QSRTIRLPFHMVEATYRVREA+KQLYSENGR P+ EE+ EA+GL+MKR +AVML 
Sbjct: 381  KSLSEQSRTIRLPFHMVEATYRVREAKKQLYSENGRHPDHEEVAEASGLSMKRFAAVMLT 440

Query: 1262 PKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLR 1441
            PKAPRSLDQKIGINQTLKPSEVIADPDA T+E+IL++Q M++DLNKVLD+LNPREK+V+R
Sbjct: 441  PKAPRSLDQKIGINQTLKPSEVIADPDAETSEDILIKQFMREDLNKVLDTLNPREKRVVR 500

Query: 1442 WRFGLEDGRIKTLQEIGELMGVSRER 1519
            WRFGLEDGR+KTLQEIGELMGVSRER
Sbjct: 501  WRFGLEDGRMKTLQEIGELMGVSRER 526


>ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Theobroma
            cacao]
          Length = 579

 Score =  500 bits (1288), Expect = e-169
 Identities = 279/515 (54%), Positives = 328/515 (63%), Gaps = 11/515 (2%)
 Frame = +2

Query: 8    FRSRCV--------SSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYK 163
            FR++CV        S+  TAV+D++K  +P+ EAH  S  V +  +Y+GA GPP++    
Sbjct: 35   FRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWTYIGATGPPSEASLG 94

Query: 164  ATWPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAG 343
            AT  T                                  M  N +  K E   G      
Sbjct: 95   ATLATDNLLTSDEAIIAAAAAEAVALARAAVKVAKDAALMAENYNYAKTEMKSGVSFATD 154

Query: 344  IFQSXXXXXXXXXXXXMMN---TPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSE 514
             F S            ++    T E++ +E  +  N   +         EL+  + Q S 
Sbjct: 155  SFTSKWALFTEAERAGIIGDSPTDESEMEEDDSEQNSTTESDELEPTNEELERLEEQLSR 214

Query: 515  NITVRSWRQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXX 694
            +I VRS RQ E                                Q+VDYSDPLRYLRG   
Sbjct: 215  SIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTS 274

Query: 695  XXXXXXXXXXXXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNY 874
                           GIQDL+KLE LQEELAER G  PTFAQWA AAGVD +TLR+RLNY
Sbjct: 275  TSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNY 334

Query: 875  GRSCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYA 1054
            G  CKDKMIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYA
Sbjct: 335  GVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 394

Query: 1055 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTM 1234
            HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EARKQLYSENGR P++EE+ EATGL+M
Sbjct: 395  HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLSM 454

Query: 1235 KRLSAVMLIPKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSL 1414
            KRL+AV+L PKAPRSLDQKIGINQ LKPSEVIADP+A T E++L++Q M++DL KVLDSL
Sbjct: 455  KRLTAVLLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSL 514

Query: 1415 NPREKQVLRWRFGLEDGRIKTLQEIGELMGVSRER 1519
            + RE+QV+RWRFG+EDGR+KTLQEIGELMGVSRER
Sbjct: 515  SQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRER 549


>ref|XP_021621112.1| RNA polymerase sigma factor sigB isoform X2 [Manihot esculenta]
          Length = 578

 Score =  499 bits (1284), Expect = e-169
 Identities = 278/512 (54%), Positives = 325/512 (63%), Gaps = 8/512 (1%)
 Frame = +2

Query: 8    FRSRCV----SSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATWP 175
            FR++C+    SS  TAV+DL+K  +P+ EAH+ S       +Y+GAIGP  +  +++   
Sbjct: 40   FRAQCILSSTSSTSTAVLDLEKLRLPSFEAHSDSVAANSPWTYLGAIGPRKEETFRSNLA 99

Query: 176  TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFP-SQAGIFQ 352
            T                                  ++ +  S + E     P S A    
Sbjct: 100  TETLITSDEAVIAAAAAEAVALARAAVKFAKEAATLVKSSPSAETESKLATPQSTADALS 159

Query: 353  SXXXXXXXXXXXXMMN---TPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENIT 523
            S            ++    T ET  +E  +     K+         EL L Q Q S+ IT
Sbjct: 160  SRLPQFTETERACILGDSVTAETGQREEYSMQYPVKESDDLEPTHEELALLQKQLSDGIT 219

Query: 524  VRSWRQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXX 703
            VRSWRQ E                                QEVDYSDPLRYLRG      
Sbjct: 220  VRSWRQAERKARRARAAEKSAATVMPVKSGSTSKKKRASLQEVDYSDPLRYLRGTTSTSR 279

Query: 704  XXXXXXXXXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRS 883
                        GIQDL+KLE L EELA+R G  PTFAQWA AAGV  RTLR RLN+G  
Sbjct: 280  LLTANEELELSEGIQDLLKLEGLHEELAKRCGGEPTFAQWAAAAGVHQRTLRERLNHGTF 339

Query: 884  CKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWW 1063
            CKDKMIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWW
Sbjct: 340  CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWW 399

Query: 1064 IKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRL 1243
            IKQAVRKSLSDQSRTIRLPFHMVEATYRV+EAR+QLYSENGR P+DEE+ EA GL+MKRL
Sbjct: 400  IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARRQLYSENGRHPDDEEVAEAAGLSMKRL 459

Query: 1244 SAVMLIPKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPR 1423
            SAV+L PKAPRSLDQK+G+N  LKPSEVIADPDA T E+++++Q MK+DL KVLDSL+PR
Sbjct: 460  SAVLLTPKAPRSLDQKMGLNMDLKPSEVIADPDAETAEDLIMKQFMKRDLEKVLDSLSPR 519

Query: 1424 EKQVLRWRFGLEDGRIKTLQEIGELMGVSRER 1519
            E QV+RWRFGL+DGR+KTLQEIGE+MGVSRER
Sbjct: 520  ENQVIRWRFGLDDGRMKTLQEIGEMMGVSRER 551


>ref|XP_021621111.1| RNA polymerase sigma factor sigB isoform X1 [Manihot esculenta]
 gb|OAY44509.1| hypothetical protein MANES_08G156300 [Manihot esculenta]
          Length = 579

 Score =  499 bits (1284), Expect = e-169
 Identities = 278/512 (54%), Positives = 325/512 (63%), Gaps = 8/512 (1%)
 Frame = +2

Query: 8    FRSRCV----SSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATWP 175
            FR++C+    SS  TAV+DL+K  +P+ EAH+ S       +Y+GAIGP  +  +++   
Sbjct: 41   FRAQCILSSTSSTSTAVLDLEKLRLPSFEAHSDSVAANSPWTYLGAIGPRKEETFRSNLA 100

Query: 176  TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFP-SQAGIFQ 352
            T                                  ++ +  S + E     P S A    
Sbjct: 101  TETLITSDEAVIAAAAAEAVALARAAVKFAKEAATLVKSSPSAETESKLATPQSTADALS 160

Query: 353  SXXXXXXXXXXXXMMN---TPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENIT 523
            S            ++    T ET  +E  +     K+         EL L Q Q S+ IT
Sbjct: 161  SRLPQFTETERACILGDSVTAETGQREEYSMQYPVKESDDLEPTHEELALLQKQLSDGIT 220

Query: 524  VRSWRQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXX 703
            VRSWRQ E                                QEVDYSDPLRYLRG      
Sbjct: 221  VRSWRQAERKARRARAAEKSAATVMPVKSGSTSKKKRASLQEVDYSDPLRYLRGTTSTSR 280

Query: 704  XXXXXXXXXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRS 883
                        GIQDL+KLE L EELA+R G  PTFAQWA AAGV  RTLR RLN+G  
Sbjct: 281  LLTANEELELSEGIQDLLKLEGLHEELAKRCGGEPTFAQWAAAAGVHQRTLRERLNHGTF 340

Query: 884  CKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWW 1063
            CKDKMIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWW
Sbjct: 341  CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWW 400

Query: 1064 IKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRL 1243
            IKQAVRKSLSDQSRTIRLPFHMVEATYRV+EAR+QLYSENGR P+DEE+ EA GL+MKRL
Sbjct: 401  IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARRQLYSENGRHPDDEEVAEAAGLSMKRL 460

Query: 1244 SAVMLIPKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPR 1423
            SAV+L PKAPRSLDQK+G+N  LKPSEVIADPDA T E+++++Q MK+DL KVLDSL+PR
Sbjct: 461  SAVLLTPKAPRSLDQKMGLNMDLKPSEVIADPDAETAEDLIMKQFMKRDLEKVLDSLSPR 520

Query: 1424 EKQVLRWRFGLEDGRIKTLQEIGELMGVSRER 1519
            E QV+RWRFGL+DGR+KTLQEIGE+MGVSRER
Sbjct: 521  ENQVIRWRFGLDDGRMKTLQEIGEMMGVSRER 552


>ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB [Ziziphus jujuba]
          Length = 573

 Score =  497 bits (1280), Expect = e-168
 Identities = 275/505 (54%), Positives = 324/505 (64%), Gaps = 3/505 (0%)
 Frame = +2

Query: 14   SRCVSSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKATWPTXXXXX 193
            S   S   T V++L+K  +P+L+A++ S    +  +Y GAIGPPAK + +AT  T     
Sbjct: 42   SPSTSMATTTVLNLEKLRLPSLDANSDSVTANRPWTYTGAIGPPAKANLEATLATETLLT 101

Query: 194  XXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXXXX 373
                                         +I N+   + E +  F  +            
Sbjct: 102  SEEAVIAAAAAEAVTLAKAAVKVAKDATLLINNNPCTRAESTSLFSPEDDALHLKWPQHM 161

Query: 374  XXXXXXMMNT---PETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQI 544
                   +     P+T   +  +     K+         EL+L Q+Q S  I VRS RQ 
Sbjct: 162  KTGQPVRLGDSMGPKTAQLDDYSMQCAIKEADDLEPTHEELELLQSQLSNGIAVRSRRQT 221

Query: 545  EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXXXXXXXXXXX 724
            E                                Q++D+SDPLRYLR              
Sbjct: 222  ERKARRTRAAEKAAATVVSVKSGSTVRKKRASLQDIDHSDPLRYLRATTSTSRLLTATEE 281

Query: 725  XXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIK 904
                 GIQDL+KLE LQEEL ER GS PTFAQWA AAGVD +TLR R+NYG  CKDKMIK
Sbjct: 282  IELSEGIQDLLKLEKLQEELTERCGSQPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIK 341

Query: 905  SNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRK 1084
            SNIRLVISIAKN+QGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRK
Sbjct: 342  SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK 401

Query: 1085 SLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMKRLSAVMLIP 1264
            SLSDQSRTIRLPFHMVEATYRV+EARKQLYS+NGR P+DEE+ EATGL+MKRL+AV+L P
Sbjct: 402  SLSDQSRTIRLPFHMVEATYRVKEARKQLYSKNGRHPDDEEVAEATGLSMKRLAAVLLTP 461

Query: 1265 KAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRW 1444
            KAPRSL+QKIGINQ LKPSEVIADPDA T+E++L+R+ MKQDL+KVLDSLNPREKQV+RW
Sbjct: 462  KAPRSLEQKIGINQNLKPSEVIADPDAETSEDVLIRKFMKQDLDKVLDSLNPREKQVIRW 521

Query: 1445 RFGLEDGRIKTLQEIGELMGVSRER 1519
            RFG+EDGR+KTLQEIGELMGVSRER
Sbjct: 522  RFGMEDGRMKTLQEIGELMGVSRER 546


>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
            grandis]
 gb|KCW76739.1| hypothetical protein EUGRSUZ_D01094 [Eucalyptus grandis]
          Length = 588

 Score =  497 bits (1279), Expect = e-168
 Identities = 285/519 (54%), Positives = 331/519 (63%), Gaps = 15/519 (2%)
 Frame = +2

Query: 8    FRSRCV---------SSQMTAVI-DLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTD 157
            FR++C+         SS  TAV+ D++K  +P+LE  T S    +  +Y GA+GPPA+ +
Sbjct: 45   FRAQCLLSATSPSTLSSAATAVVLDMEKLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVN 104

Query: 158  YKATWPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQ 337
              AT  T                                  MI N+SS  ++      S+
Sbjct: 105  LGATLATETLLTSDEAVIAAAASEAVTLAKAALKSAKHAALMIRNESSSNIDNKLELSSR 164

Query: 338  AGIFQSXXXXXXXXXXXXMMNT---PETDHQEGRTNSNQFKDEGISSLRLN--ELDLQQT 502
                 S            ++     PE   +EG  N  Q+  +    L     EL L Q 
Sbjct: 165  TSTSLSKHAELLELEHSNILTELMEPEGGLREG--NVMQYSTDKSEDLEPTHEELQLLQV 222

Query: 503  QDSENITVRSWRQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLR 682
            Q  ++I VRS RQ E                                QEVDYSDPLRYLR
Sbjct: 223  QLFKSIAVRSRRQTERKEIRERAAEKAAANVVSVKSGSLSKKKRAALQEVDYSDPLRYLR 282

Query: 683  GXXXXXXXXXXXXXXXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRT 862
            G                  GIQDL+KLE LQ EL ER G  P FAQWA AAGVD +TLR 
Sbjct: 283  GTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERCGGEPAFAQWAAAAGVDQKTLRK 342

Query: 863  RLNYGRSCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKF 1042
            RLNYGR CKDKMIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGLV+G EKFDASKGFKF
Sbjct: 343  RLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGFKF 402

Query: 1043 STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEAT 1222
            STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EARKQLYSENGRQP++EE+ EAT
Sbjct: 403  STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEAT 462

Query: 1223 GLTMKRLSAVMLIPKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKV 1402
            GL+MKRL+AV++ PKAPRSLDQKIGINQ LKPSEVIADP+A T+E++L++Q M+QDL KV
Sbjct: 463  GLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIADPNAETSEDVLLKQFMRQDLEKV 522

Query: 1403 LDSLNPREKQVLRWRFGLEDGRIKTLQEIGELMGVSRER 1519
            LD+LNPREKQV+RWRFGLEDGR+KTLQEIGELMGVSRER
Sbjct: 523  LDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRER 561


>ref|XP_017627350.1| PREDICTED: RNA polymerase sigma factor sigB [Gossypium arboreum]
 gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 578

 Score =  496 bits (1277), Expect = e-168
 Identities = 279/514 (54%), Positives = 326/514 (63%), Gaps = 10/514 (1%)
 Frame = +2

Query: 8    FRSRCV-------SSQMTAVIDLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTDYKA 166
            FRS+CV       S+  TAV+D++K  +P+ EAH+ S    +  +Y GA GPP++  + A
Sbjct: 35   FRSQCVLSTTSSTSTATTAVLDVEKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGA 94

Query: 167  TWPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGI 346
            T  T                                  M+ N SS K E      S    
Sbjct: 95   TLATENLLTSDEAVIAAAAAEAVALARAAAKVAKDAAIMVKNHSSAKTEMKSPGSSATDT 154

Query: 347  FQSXXXXXXXXXXXXMMN---TPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSEN 517
              S            ++    + E + +E     N  K+         EL L + Q S +
Sbjct: 155  LTSKWGLFTEAERAGIVGDYVSDELEMEEDDFEQNSTKESDELEPTNEELKLLEEQLSRS 214

Query: 518  ITVRSWRQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLRGXXXX 697
            I VRS RQ E                                Q++DYSDPLRYLRG    
Sbjct: 215  IAVRSNRQPERKAKRTRAAEKAATNVVSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNT 274

Query: 698  XXXXXXXXXXXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYG 877
                          GIQDL+KLE L EELAER G PPTFAQWA AA VD +TLR RLNYG
Sbjct: 275  SKLLTANEELELSEGIQDLLKLEVLHEELAERCGRPPTFAQWAAAAEVDRKTLRERLNYG 334

Query: 878  RSCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAH 1057
              CKDKMIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGL++GAEKFDASKGFKFSTYAH
Sbjct: 335  TICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAH 394

Query: 1058 WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTMK 1237
            WWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EARKQLYSENGRQP++ E+ EATGL+MK
Sbjct: 395  WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNIEVAEATGLSMK 454

Query: 1238 RLSAVMLIPKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLN 1417
            RL+AV+L PKAPRSLDQKIGINQ LKPSEVIADP+A + E+IL++Q MK+DL KVLDSL+
Sbjct: 455  RLTAVLLAPKAPRSLDQKIGINQNLKPSEVIADPEADSAEDILLKQFMKKDLEKVLDSLS 514

Query: 1418 PREKQVLRWRFGLEDGRIKTLQEIGELMGVSRER 1519
            PRE+QV+RWRFG+EDGR+KTLQEIGE MGVSRER
Sbjct: 515  PRERQVIRWRFGMEDGRMKTLQEIGESMGVSRER 548


>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
            grandis]
          Length = 601

 Score =  497 bits (1279), Expect = e-168
 Identities = 285/519 (54%), Positives = 331/519 (63%), Gaps = 15/519 (2%)
 Frame = +2

Query: 8    FRSRCV---------SSQMTAVI-DLDKTYVPTLEAHTTSSGVTQRLSYVGAIGPPAKTD 157
            FR++C+         SS  TAV+ D++K  +P+LE  T S    +  +Y GA+GPPA+ +
Sbjct: 58   FRAQCLLSATSPSTLSSAATAVVLDMEKLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVN 117

Query: 158  YKATWPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQ 337
              AT  T                                  MI N+SS  ++      S+
Sbjct: 118  LGATLATETLLTSDEAVIAAAASEAVTLAKAALKSAKHAALMIRNESSSNIDNKLELSSR 177

Query: 338  AGIFQSXXXXXXXXXXXXMMNT---PETDHQEGRTNSNQFKDEGISSLRLN--ELDLQQT 502
                 S            ++     PE   +EG  N  Q+  +    L     EL L Q 
Sbjct: 178  TSTSLSKHAELLELEHSNILTELMEPEGGLREG--NVMQYSTDKSEDLEPTHEELQLLQV 235

Query: 503  QDSENITVRSWRQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVDYSDPLRYLR 682
            Q  ++I VRS RQ E                                QEVDYSDPLRYLR
Sbjct: 236  QLFKSIAVRSRRQTERKEIRERAAEKAAANVVSVKSGSLSKKKRAALQEVDYSDPLRYLR 295

Query: 683  GXXXXXXXXXXXXXXXXXXGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRT 862
            G                  GIQDL+KLE LQ EL ER G  P FAQWA AAGVD +TLR 
Sbjct: 296  GTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERCGGEPAFAQWAAAAGVDQKTLRK 355

Query: 863  RLNYGRSCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKF 1042
            RLNYGR CKDKMIKSNIRLVISIAKN+QGAGMNLQDLVQEGCRGLV+G EKFDASKGFKF
Sbjct: 356  RLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGFKF 415

Query: 1043 STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEAT 1222
            STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EARKQLYSENGRQP++EE+ EAT
Sbjct: 416  STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEAT 475

Query: 1223 GLTMKRLSAVMLIPKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKV 1402
            GL+MKRL+AV++ PKAPRSLDQKIGINQ LKPSEVIADP+A T+E++L++Q M+QDL KV
Sbjct: 476  GLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIADPNAETSEDVLLKQFMRQDLEKV 535

Query: 1403 LDSLNPREKQVLRWRFGLEDGRIKTLQEIGELMGVSRER 1519
            LD+LNPREKQV+RWRFGLEDGR+KTLQEIGELMGVSRER
Sbjct: 536  LDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRER 574