BLASTX nr result
ID: Ophiopogon24_contig00014591
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00014591
(715 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020253401.1| DNA-directed RNA polymerases II and IV subun... 283 4e-94
ref|XP_020254663.1| DNA-directed RNA polymerases II and IV subun... 260 7e-85
ref|XP_020100932.1| DNA-directed RNA polymerases II and IV subun... 260 7e-85
gb|PKA55370.1| hypothetical protein AXF42_Ash004009 [Apostasia s... 256 2e-83
ref|XP_008801856.1| PREDICTED: DNA-directed RNA polymerases II a... 254 9e-83
ref|XP_020532058.1| DNA-directed RNA polymerases II and IV subun... 254 3e-82
ref|XP_010928511.1| PREDICTED: DNA-directed RNA polymerases II a... 253 3e-82
ref|XP_018815016.1| PREDICTED: DNA-directed RNA polymerases II a... 253 6e-82
ref|XP_006858910.1| DNA-directed RNA polymerases II and IV subun... 253 6e-82
ref|XP_010930084.1| PREDICTED: DNA-directed RNA polymerases II a... 252 8e-82
ref|XP_018829461.1| PREDICTED: DNA-directed RNA polymerases II a... 252 1e-81
gb|OAY80387.1| DNA-directed RNA polymerases II and IV subunit 5A... 251 2e-81
gb|OVA00057.1| RNA polymerase [Macleaya cordata] 250 7e-81
gb|AFK41303.1| unknown [Medicago truncatula] 250 7e-81
ref|XP_003610652.2| DNA-directed RNA polymerase II [Medicago tru... 250 7e-81
ref|XP_022959553.1| DNA-directed RNA polymerases II and IV subun... 249 1e-80
ref|XP_020101892.1| DNA-directed RNA polymerases II and IV subun... 249 1e-80
ref|XP_020214903.1| DNA-directed RNA polymerases II and IV subun... 249 1e-80
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases II a... 249 1e-80
dbj|GAV91188.1| RNA_pol_Rpb5_C domain-containing protein/RNA_pol... 249 2e-80
>ref|XP_020253401.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Asparagus
officinalis]
gb|ONK77730.1| uncharacterized protein A4U43_C02F9950 [Asparagus officinalis]
Length = 206
Score = 283 bits (725), Expect = 4e-94
Identities = 138/200 (69%), Positives = 168/200 (84%)
Frame = +2
Query: 116 MAASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKK 295
MAASEE ++LFRIRKN++EML DRGY+V D ELSMD+K+F+DKFG+S +R+DL INK K+
Sbjct: 1 MAASEEEVKLFRIRKNILEMLSDRGYVVADEELSMDFKQFRDKFGESFKREDLLINKYKR 60
Query: 296 DNPLDQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTR 475
DNP DQIYV F ND ++GA HIK Y ERM Q+ VF+ I+V+Q +++ FA + I DQ +
Sbjct: 61 DNPSDQIYVFFPNDPKVGASHIKRYAERMKQDSVFKAIVVVQ-QISSFAKKGIQDQSFAQ 119
Query: 476 RFHVEAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYH 655
+F VE F EAEL+VNI++HMLVP HQVLSD EKKALLE YHLK+TQLPRIQL DPVARYH
Sbjct: 120 KFRVEIFQEAELVVNISKHMLVPPHQVLSDNEKKALLERYHLKETQLPRIQLDDPVARYH 179
Query: 656 GLRRGQVVKIIRPSETAGRY 715
GL+RGQVVKIIRPS+TAGRY
Sbjct: 180 GLQRGQVVKIIRPSDTAGRY 199
>ref|XP_020254663.1| DNA-directed RNA polymerases II and IV subunit 5A [Asparagus
officinalis]
gb|ONK78506.1| uncharacterized protein A4U43_C02F19500 [Asparagus officinalis]
Length = 205
Score = 260 bits (664), Expect = 7e-85
Identities = 129/200 (64%), Positives = 160/200 (80%)
Frame = +2
Query: 116 MAASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKK 295
MA + + RLFRIR+ VMEML+DRGYLV+D E+ M F +KFG+ ++R+DL I+K+KK
Sbjct: 1 MAEDQTASRLFRIRRTVMEMLRDRGYLVVDYEVKMSKNEFLNKFGEGVKREDLMISKSKK 60
Query: 296 DNPLDQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTR 475
++P DQIYV F ND+++G KHIK Y+E M + V R ILV+Q LTPFA H QE++
Sbjct: 61 NDPTDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKA--HLQELSP 118
Query: 476 RFHVEAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYH 655
+FH+E FLEAELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+TDPVARY+
Sbjct: 119 KFHLEVFLEAELLVNIKEHVLVPEHQVLTAEEKKTLLERYTLKETQLPRIQITDPVARYY 178
Query: 656 GLRRGQVVKIIRPSETAGRY 715
GL+RGQVVKIIRPSETAGRY
Sbjct: 179 GLKRGQVVKIIRPSETAGRY 198
>ref|XP_020100932.1| DNA-directed RNA polymerases II and IV subunit 5A [Ananas comosus]
gb|OAY71099.1| DNA-directed RNA polymerases II and IV subunit 5A [Ananas comosus]
Length = 205
Score = 260 bits (664), Expect = 7e-85
Identities = 127/200 (63%), Positives = 163/200 (81%)
Frame = +2
Query: 116 MAASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKK 295
MA+ +E RLFRIR+ VM++L+DRGYLVLDVE+ M+ ++F DKFG+++RR+DL INKAKK
Sbjct: 1 MASDDEISRLFRIRRTVMQILRDRGYLVLDVEIEMNKRQFLDKFGEAVRREDLVINKAKK 60
Query: 296 DNPLDQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTR 475
++P DQIYV F + ++G K IK Y+ERM E V R ILV Q LTPFA ++ EV++
Sbjct: 61 NDPSDQIYVFFPEEPKVGVKQIKQYIERMKAENVMRGILVAQQNLTPFARSSL--LEVSQ 118
Query: 476 RFHVEAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYH 655
++H+E F EAELLVNI H+LVPEHQ+L+ EEKK LLE Y +K+TQLPRIQ+TDP+ARY+
Sbjct: 119 KYHLEVFQEAELLVNIKEHVLVPEHQLLTPEEKKTLLERYTVKETQLPRIQVTDPIARYY 178
Query: 656 GLRRGQVVKIIRPSETAGRY 715
GL+RGQVVKIIRPSETAGRY
Sbjct: 179 GLKRGQVVKIIRPSETAGRY 198
>gb|PKA55370.1| hypothetical protein AXF42_Ash004009 [Apostasia shenzhenica]
Length = 204
Score = 256 bits (654), Expect = 2e-83
Identities = 127/196 (64%), Positives = 156/196 (79%)
Frame = +2
Query: 128 EESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKKDNPL 307
E++ RL+RIR+ VMEML+DRGYLV+D E+ M F KFG+S++R+DL INKAKK+NP
Sbjct: 4 EQTSRLYRIRRTVMEMLRDRGYLVVDFEIRMSKMEFIHKFGESVKREDLIINKAKKNNPS 63
Query: 308 DQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHV 487
DQIYV F NDE++G KHIK Y+E M E V R +LV+Q LTPFA + QE+ ++H+
Sbjct: 64 DQIYVFFPNDEKVGMKHIKKYVELMKSENVPRALLVVQQNLTPFARSYL--QELVPKYHL 121
Query: 488 EAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRR 667
E F EAELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+ DP+ARY+GL+R
Sbjct: 122 EVFQEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQVIDPIARYYGLKR 181
Query: 668 GQVVKIIRPSETAGRY 715
GQVVKIIRPSETAGRY
Sbjct: 182 GQVVKIIRPSETAGRY 197
>ref|XP_008801856.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Phoenix dactylifera]
ref|XP_008801857.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Phoenix dactylifera]
Length = 204
Score = 254 bits (650), Expect = 9e-83
Identities = 126/192 (65%), Positives = 158/192 (82%)
Frame = +2
Query: 140 RLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKKDNPLDQIY 319
RLFRIR+ VM+ML+DRGYLVLD+E++M+ +F +KFG+ ++RDDL INKAKK++P DQIY
Sbjct: 8 RLFRIRRTVMQMLRDRGYLVLDLEINMNKNQFLEKFGEGVKRDDLVINKAKKNDPADQIY 67
Query: 320 VIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHVEAFL 499
V F ND ++G K IK Y+ERM E V R ILV+Q LTPFA +++ EV +++ +E F
Sbjct: 68 VFFPNDAKVGVKQIKQYVERMKAENVVRGILVVQQALTPFAKQSL--TEVAQKYLLEVFQ 125
Query: 500 EAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRRGQVV 679
+AELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+TDPVARY+GL+RGQVV
Sbjct: 126 DAELLVNIKDHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPVARYYGLKRGQVV 185
Query: 680 KIIRPSETAGRY 715
KIIRPSETAGRY
Sbjct: 186 KIIRPSETAGRY 197
>ref|XP_020532058.1| DNA-directed RNA polymerases II and IV subunit 5A isoform X1
[Amborella trichopoda]
Length = 223
Score = 254 bits (649), Expect = 3e-82
Identities = 123/207 (59%), Positives = 162/207 (78%), Gaps = 1/207 (0%)
Frame = +2
Query: 98 RPRAGSMAA-SEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDL 274
R + G M+ +++ +LFRIR+ +M+ML+DRGYLV D E++M +F +KFGD +++DDL
Sbjct: 12 RRKEGEMSGMDDQTSKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDL 71
Query: 275 TINKAKKDNPLDQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAI 454
INK ++NP +QIYV F ++++G K +K Y ERM E VFR ILVLQ LTPFA + +
Sbjct: 72 VINKTMRNNPSEQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCV 131
Query: 455 HDQEVTRRFHVEAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLT 634
QE++ +FH+E F E+ELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+T
Sbjct: 132 --QEISAKFHLEIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQIT 189
Query: 635 DPVARYHGLRRGQVVKIIRPSETAGRY 715
DP+ARY+GL+RGQVVKIIRPSETAGRY
Sbjct: 190 DPIARYYGLKRGQVVKIIRPSETAGRY 216
>ref|XP_010928511.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Elaeis guineensis]
ref|XP_010928512.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Elaeis guineensis]
Length = 204
Score = 253 bits (647), Expect = 3e-82
Identities = 123/198 (62%), Positives = 162/198 (81%)
Frame = +2
Query: 122 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKKDN 301
+ ++ RLFRIR+ VM+ML+DRGYLVLD+E++M+ ++F +KFG+ ++R+DL INKAKK++
Sbjct: 2 SEDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKRQFLEKFGEGVKREDLVINKAKKND 61
Query: 302 PLDQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 481
P DQIYV F ND ++G K IK Y+ERM E V R ILV+Q LTPFA +++ EV+ ++
Sbjct: 62 PADQIYVFFPNDAKVGVKQIKQYVERMKAENVVRGILVVQQALTPFARQSL--AEVSHKY 119
Query: 482 HVEAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 661
+E F ++ELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+TDP+ARY+GL
Sbjct: 120 MLEVFQDSELLVNIKEHVLVPEHQVLTAEEKKTLLERYTLKETQLPRIQVTDPIARYYGL 179
Query: 662 RRGQVVKIIRPSETAGRY 715
+RGQVVKIIRPSETAGRY
Sbjct: 180 KRGQVVKIIRPSETAGRY 197
>ref|XP_018815016.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018815026.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018815034.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
Length = 206
Score = 253 bits (645), Expect = 6e-82
Identities = 123/200 (61%), Positives = 160/200 (80%)
Frame = +2
Query: 116 MAASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKK 295
M + EE RLFRIR+ VM+MLKDRGY V D E+ M ++FKDK+G+S++R+DL INKAK+
Sbjct: 2 MLSEEEITRLFRIRRTVMQMLKDRGYFVGDFEIDMTKEQFKDKYGESMKREDLVINKAKR 61
Query: 296 DNPLDQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTR 475
++ DQIY+ F ++ ++G K +K Y +RM E VFR ILV+Q LTPFA +I E++
Sbjct: 62 NDSSDQIYIFFPDEPKVGVKTMKTYSQRMKSENVFRAILVVQQNLTPFARSSI--SEIST 119
Query: 476 RFHVEAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYH 655
+FH+E F EAELL+NI H+LVPEHQVL++EEKK LLE Y +K+TQLPR+Q+TDPVARY+
Sbjct: 120 KFHLEVFQEAELLINIKDHVLVPEHQVLTNEEKKTLLERYTVKETQLPRMQVTDPVARYY 179
Query: 656 GLRRGQVVKIIRPSETAGRY 715
GL+RGQVVKIIRPSETAGRY
Sbjct: 180 GLKRGQVVKIIRPSETAGRY 199
>ref|XP_006858910.1| DNA-directed RNA polymerases II and IV subunit 5A isoform X2
[Amborella trichopoda]
ref|XP_020532059.1| DNA-directed RNA polymerases II and IV subunit 5A isoform X2
[Amborella trichopoda]
gb|ERN20377.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
Length = 206
Score = 253 bits (645), Expect = 6e-82
Identities = 120/196 (61%), Positives = 157/196 (80%)
Frame = +2
Query: 128 EESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKKDNPL 307
+++ +LFRIR+ +M+ML+DRGYLV D E++M +F +KFGD +++DDL INK ++NP
Sbjct: 6 DQTSKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNNPS 65
Query: 308 DQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHV 487
+QIYV F ++++G K +K Y ERM E VFR ILVLQ LTPFA + + QE++ +FH+
Sbjct: 66 EQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCV--QEISAKFHL 123
Query: 488 EAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRR 667
E F E+ELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+TDP+ARY+GL+R
Sbjct: 124 EIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 183
Query: 668 GQVVKIIRPSETAGRY 715
GQVVKIIRPSETAGRY
Sbjct: 184 GQVVKIIRPSETAGRY 199
>ref|XP_010930084.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Elaeis guineensis]
ref|XP_010930085.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Elaeis guineensis]
ref|XP_010930086.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Elaeis guineensis]
Length = 204
Score = 252 bits (644), Expect = 8e-82
Identities = 123/198 (62%), Positives = 161/198 (81%)
Frame = +2
Query: 122 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKKDN 301
+ ++ RLFRIR+ VM+ML+DRGYLVLD+E++M+ +F +KFG+ ++R+DL INKAKK++
Sbjct: 2 SEDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKLQFLEKFGEGVKREDLVINKAKKND 61
Query: 302 PLDQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 481
P DQIYV F ND ++G K IK Y+ERM E V R ILV+Q LTPFA +++ EV++++
Sbjct: 62 PADQIYVFFPNDAKVGVKQIKQYVERMKAENVTRGILVVQQALTPFARQSL--AEVSQKY 119
Query: 482 HVEAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 661
+E F + ELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+TDP+ARY+GL
Sbjct: 120 MLEVFQDTELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPIARYYGL 179
Query: 662 RRGQVVKIIRPSETAGRY 715
+RGQVVKIIRPSETAGRY
Sbjct: 180 KRGQVVKIIRPSETAGRY 197
>ref|XP_018829461.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018829463.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018829464.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
Length = 206
Score = 252 bits (643), Expect = 1e-81
Identities = 122/198 (61%), Positives = 159/198 (80%)
Frame = +2
Query: 122 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKKDN 301
+ EE RLFRIR+ VM+MLKDRGY V D E+ M ++FK+K+G+S++R+DL INK+K++N
Sbjct: 4 SEEEITRLFRIRRTVMQMLKDRGYFVGDFEIDMTKEQFKNKYGESMKREDLVINKSKRNN 63
Query: 302 PLDQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 481
DQIY+ F + ++G K +K Y +RM E VFR ILV+Q LTPFA +I+ E++ +F
Sbjct: 64 SSDQIYIFFPEEPKVGVKTMKTYSQRMKSENVFRAILVVQQNLTPFARSSIN--EISTKF 121
Query: 482 HVEAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 661
H+E F EAELL+NI H+LVPEHQVL++EEKK LLE Y +K+TQLPRIQ+TDPVARY+GL
Sbjct: 122 HLEVFQEAELLINIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGL 181
Query: 662 RRGQVVKIIRPSETAGRY 715
+RGQVVKIIRPSETAGRY
Sbjct: 182 KRGQVVKIIRPSETAGRY 199
>gb|OAY80387.1| DNA-directed RNA polymerases II and IV subunit 5A [Ananas comosus]
Length = 206
Score = 251 bits (642), Expect = 2e-81
Identities = 130/193 (67%), Positives = 154/193 (79%), Gaps = 1/193 (0%)
Frame = +2
Query: 140 RLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFG-DSIRRDDLTINKAKKDNPLDQI 316
RLFRIR+ VM+ML+DRGYLVLD E++M F KFG DSIRRDDL INK+KK++P DQI
Sbjct: 9 RLFRIRRTVMQMLRDRGYLVLDFEINMSKAEFLHKFGPDSIRRDDLLINKSKKNDPADQI 68
Query: 317 YVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHVEAF 496
YV F NDE++G KHIK Y+E M E V R +LVLQ LTPFA + QE++ +F +E F
Sbjct: 69 YVFFPNDEKVGMKHIKKYVELMKAESVPRAMLVLQLNLTPFAKSYL--QEISPKFFLEVF 126
Query: 497 LEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRRGQV 676
EAELLVNI H LVPEHQVL+ +EKK LLE Y LK+TQLPRIQ+TDP+ARY+GL+RGQV
Sbjct: 127 QEAELLVNIKDHALVPEHQVLTSQEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQV 186
Query: 677 VKIIRPSETAGRY 715
VKIIRPSETAGRY
Sbjct: 187 VKIIRPSETAGRY 199
>gb|OVA00057.1| RNA polymerase [Macleaya cordata]
Length = 205
Score = 250 bits (638), Expect = 7e-81
Identities = 123/200 (61%), Positives = 155/200 (77%)
Frame = +2
Query: 116 MAASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKK 295
M++ EE +LFRIRK VM+ML+DRGYLV D E++ F KFGD+++RDDL INK+K+
Sbjct: 1 MSSDEEVTKLFRIRKTVMQMLRDRGYLVGDFEINETRAGFLSKFGDNVKRDDLVINKSKR 60
Query: 296 DNPLDQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTR 475
++ DQIYV F ++++G K +K Y RM E VFR ILV+Q LTPFA + E++
Sbjct: 61 NDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCV--SEIST 118
Query: 476 RFHVEAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYH 655
+FH+E F EAELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+TDP+ARY+
Sbjct: 119 KFHLEVFQEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYY 178
Query: 656 GLRRGQVVKIIRPSETAGRY 715
GL+RGQVVKIIRPSETAGRY
Sbjct: 179 GLKRGQVVKIIRPSETAGRY 198
>gb|AFK41303.1| unknown [Medicago truncatula]
Length = 206
Score = 250 bits (638), Expect = 7e-81
Identities = 124/198 (62%), Positives = 151/198 (76%)
Frame = +2
Query: 122 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKKDN 301
+ EE RL+RIRK VM+MLKDR YLV D EL+M FKDK+G++++R+DL INK KKD
Sbjct: 4 SEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTKKDK 63
Query: 302 PLDQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 481
P DQIYV F + ++G K +K Y RM E V+R ILV Q LTPFA + E+ +F
Sbjct: 64 PSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCV--SEIASKF 121
Query: 482 HVEAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 661
H+E F EAELLVNI H+LVPEHQ+L+D EKK LLE Y +K+TQLPRIQ+TDPVARY+GL
Sbjct: 122 HLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGL 181
Query: 662 RRGQVVKIIRPSETAGRY 715
+RGQVVKIIRPSETAGRY
Sbjct: 182 KRGQVVKIIRPSETAGRY 199
>ref|XP_003610652.2| DNA-directed RNA polymerase II [Medicago truncatula]
gb|AES93610.2| DNA-directed RNA polymerase II [Medicago truncatula]
Length = 206
Score = 250 bits (638), Expect = 7e-81
Identities = 124/198 (62%), Positives = 151/198 (76%)
Frame = +2
Query: 122 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKKDN 301
+ EE RL+RIRK VM+MLKDR YLV D EL+M FKDK+G++++R+DL INK KKD
Sbjct: 4 SEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTKKDK 63
Query: 302 PLDQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 481
P DQIYV F + ++G K +K Y RM E V+R ILV Q LTPFA + E+ +F
Sbjct: 64 PSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCV--SEIASKF 121
Query: 482 HVEAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 661
H+E F EAELLVNI H+LVPEHQ+L+D EKK LLE Y +K+TQLPRIQ+TDPVARY+GL
Sbjct: 122 HLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGL 181
Query: 662 RRGQVVKIIRPSETAGRY 715
+RGQVVKIIRPSETAGRY
Sbjct: 182 KRGQVVKIIRPSETAGRY 199
>ref|XP_022959553.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
moschata]
ref|XP_022959554.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
moschata]
ref|XP_022959555.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
moschata]
ref|XP_023004795.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
maxima]
ref|XP_023004796.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
maxima]
ref|XP_023004797.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
maxima]
ref|XP_023513561.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
pepo subsp. pepo]
ref|XP_023513563.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
pepo subsp. pepo]
Length = 206
Score = 249 bits (637), Expect = 1e-80
Identities = 122/198 (61%), Positives = 156/198 (78%)
Frame = +2
Query: 122 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKKDN 301
A EE RLFR+RK V++MLKDRGY V D E+ M ++FK+K+G+S++R+D+ INKAK+++
Sbjct: 4 AEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRND 63
Query: 302 PLDQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 481
DQIY+ F + ++G K +K Y RM E VFR ILV+Q LTPFA I E++ +F
Sbjct: 64 SSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI--SEISTKF 121
Query: 482 HVEAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 661
H+E F EAELLVNI H+LVPEHQ+LS+EEKK LLE Y +K+TQLPRIQ+TDPVARY+GL
Sbjct: 122 HLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGL 181
Query: 662 RRGQVVKIIRPSETAGRY 715
+RGQVVKIIRPSETAGRY
Sbjct: 182 KRGQVVKIIRPSETAGRY 199
>ref|XP_020101892.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Ananas
comosus]
Length = 206
Score = 249 bits (637), Expect = 1e-80
Identities = 129/193 (66%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
Frame = +2
Query: 140 RLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFG-DSIRRDDLTINKAKKDNPLDQI 316
RLFRIR+ VM+ML+DRGYLVLD E++M F KFG D IRRDDL INK+KK++P DQI
Sbjct: 9 RLFRIRRTVMQMLRDRGYLVLDFEINMSKAEFLHKFGPDCIRRDDLLINKSKKNDPADQI 68
Query: 317 YVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHVEAF 496
YV F NDE++G KHIK Y+E M E V R +LVLQ LTPFA + QE++ +F +E F
Sbjct: 69 YVFFPNDEKVGMKHIKKYVELMKAESVPRAMLVLQLNLTPFAKSYL--QEISPKFFLEVF 126
Query: 497 LEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRRGQV 676
EAELLVNI H LVPEHQVL+ +EKK LLE Y LK+TQLPRIQ+TDP+ARY+GL+RGQV
Sbjct: 127 QEAELLVNIKDHALVPEHQVLTSQEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQV 186
Query: 677 VKIIRPSETAGRY 715
VKIIRPSETAGRY
Sbjct: 187 VKIIRPSETAGRY 199
>ref|XP_020214903.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cajanus
cajan]
gb|KYP68466.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Cajanus
cajan]
Length = 206
Score = 249 bits (637), Expect = 1e-80
Identities = 126/196 (64%), Positives = 153/196 (78%)
Frame = +2
Query: 128 EESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKKDNPL 307
EE RL+RIRK VM+ML+DRGYLV D E++M FK K+G++++R+DL INK+KKDN
Sbjct: 6 EEIGRLYRIRKTVMQMLRDRGYLVGDFEINMSKHDFKSKYGENMKREDLVINKSKKDNSG 65
Query: 308 DQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHV 487
DQIYV F + ++G K +K Y RM E V+R ILVLQ LTPFA I E++ RFH+
Sbjct: 66 DQIYVFFPEEVKVGVKTMKTYTNRMNSENVYRAILVLQTNLTPFARTCI--SEISSRFHL 123
Query: 488 EAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRR 667
E F EAELLVNI H+LVPEHQVL+D EKK LLE Y +K+TQLPRIQ+TDPVARY+GL+R
Sbjct: 124 EVFQEAELLVNIKEHVLVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKR 183
Query: 668 GQVVKIIRPSETAGRY 715
GQVVKIIRPSETAGRY
Sbjct: 184 GQVVKIIRPSETAGRY 199
>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Cicer arietinum]
Length = 206
Score = 249 bits (636), Expect = 1e-80
Identities = 123/196 (62%), Positives = 154/196 (78%)
Frame = +2
Query: 128 EESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKKDNPL 307
EE RL+RIRK VMEML+DR YLV D E++M +FK+K+G++++R+DL INK KKD P
Sbjct: 6 EEITRLYRIRKTVMEMLRDRNYLVGDFEINMSKHQFKEKYGENMKREDLVINKTKKDKPS 65
Query: 308 DQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHV 487
DQIYV F + ++G K +K Y+ RM E V+R ILV Q LTPFA ++ E++ +FH+
Sbjct: 66 DQIYVFFPEEVKVGVKTMKTYINRMNSENVYRAILVCQTSLTPFARTSV--AEISSKFHL 123
Query: 488 EAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRR 667
E F EAELLVNI H+LVPEHQVL+D EKK LLE Y +K+TQLPRIQ+TDPVARY+GL+R
Sbjct: 124 EVFQEAELLVNIKDHVLVPEHQVLTDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKR 183
Query: 668 GQVVKIIRPSETAGRY 715
GQVVKIIRPSETAGRY
Sbjct: 184 GQVVKIIRPSETAGRY 199
>dbj|GAV91188.1| RNA_pol_Rpb5_C domain-containing protein/RNA_pol_Rpb5_N
domain-containing protein [Cephalotus follicularis]
Length = 206
Score = 249 bits (635), Expect = 2e-80
Identities = 122/198 (61%), Positives = 158/198 (79%)
Frame = +2
Query: 122 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKRFKDKFGDSIRRDDLTINKAKKDN 301
+ EE RL+RIRK VM+MLKDR YLV D E+SM ++F KFG++++R+DL INK+K+++
Sbjct: 4 SEEEIRRLYRIRKTVMQMLKDRDYLVGDFEISMTREQFMQKFGENMKREDLLINKSKRND 63
Query: 302 PLDQIYVIFTNDERIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 481
DQI+V+F +++++G K +K Y RM E VFR ILV+QH LTPFA I+ E+ +F
Sbjct: 64 SNDQIFVLFPDEQKVGVKTMKTYTNRMKAENVFRAILVVQHNLTPFARTCIN--EIASKF 121
Query: 482 HVEAFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 661
H+E F EAELLVNI H+LVPEHQVLS EEKK LLE Y +K+TQLPRIQ++DP+ARY+GL
Sbjct: 122 HLEVFQEAELLVNIKEHVLVPEHQVLSSEEKKTLLERYTVKETQLPRIQVSDPIARYYGL 181
Query: 662 RRGQVVKIIRPSETAGRY 715
+RGQVVKIIRPSETAGRY
Sbjct: 182 KRGQVVKIIRPSETAGRY 199