BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00014510
         (853 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK63108.1| uncharacterized protein A4U43_C07F11500 [Asparagu...   194   3e-53
ref|XP_020274285.1| LOW QUALITY PROTEIN: putative RNA polymerase...   194   4e-53
ref|XP_009389521.1| PREDICTED: putative RNA polymerase II subuni...    64   1e-07
ref|XP_010921352.1| PREDICTED: putative RNA polymerase II subuni...    62   3e-07
ref|XP_020087324.1| putative RNA polymerase II subunit B1 CTD ph...    59   6e-06
ref|XP_020087323.1| putative RNA polymerase II subunit B1 CTD ph...    59   6e-06

>gb|ONK63108.1| uncharacterized protein A4U43_C07F11500 [Asparagus officinalis]
          Length = 705

 Score =  194 bits (492), Expect = 3e-53
 Identities = 125/288 (43%), Positives = 158/288 (54%), Gaps = 5/288 (1%)
 Frame = +1

Query: 4   SNLESMQGIDTAKSTELDYTTVTVGDKIDGALSKGSTATTNDISEVIAKKFKDVVITEKK 183
           S  E+ Q   +A STE+D+ T ++ D+ DG  SK S+A  ND+ E  AKK          
Sbjct: 160 SKSETAQETGSASSTEVDHMTPSLRDECDGDPSKRSSAMINDVPETTAKK---------- 209

Query: 184 ETNDFSEMIAEILEDMVITEKKQTNKGSSKSSKCKTQPDACNNNIEKLFNSDVGFTSSII 363
                       LEDM+ITEKK T+K S +S K K Q +   +NI K+ N D+GFTSSII
Sbjct: 210 ------------LEDMIITEKKNTSKQSLESLKLKFQTNVAAHNIGKVDNGDMGFTSSII 257

Query: 364 FGSEFDAALPKTC-----DVSELIAKQLEDVSIVEKTVTEAXXXXXXXXXXXXXANAGKS 528
            G++FDAAL K+C     D SELIAKQLE+V + EK   +              A+  K+
Sbjct: 258 VGNDFDAALSKSCVVSTQDASELIAKQLEEVVLAEKKKKKVKKSKSSSSNARKIASGRKN 317

Query: 529 DKLDFQSIVIIGDXXXXXXXXXXXXXXXXXXXXXAKESEDNVHIKNKTESTSHVESVDVM 708
           DK+DFQS +I GD                     + +   NVH+KNKTE   + ES DVM
Sbjct: 318 DKIDFQSTIITGD-----LVNVTSGTSSTSSLDSSSKDSVNVHVKNKTEPLGYGESDDVM 372

Query: 709 CWEGANSEKKEVSHKTGLKPSLKTSRSKRGNRSVKWANERNNEALEDK 852
              G + EKK VS +  LK SLKTSRSK GNRSVKWA+E   E LEDK
Sbjct: 373 LSGGVSMEKKHVSQENELKSSLKTSRSKGGNRSVKWADEVILEVLEDK 420


>ref|XP_020274285.1| LOW QUALITY PROTEIN: putative RNA polymerase II subunit B1 CTD
           phosphatase RPAP2 homolog [Asparagus officinalis]
          Length = 736

 Score =  194 bits (492), Expect = 4e-53
 Identities = 125/288 (43%), Positives = 158/288 (54%), Gaps = 5/288 (1%)
 Frame = +1

Query: 4   SNLESMQGIDTAKSTELDYTTVTVGDKIDGALSKGSTATTNDISEVIAKKFKDVVITEKK 183
           S  E+ Q   +A STE+D+ T ++ D+ DG  SK S+A  ND+ E  AKK          
Sbjct: 191 SKSETAQETGSASSTEVDHMTPSLRDECDGDPSKRSSAMINDVPETTAKK---------- 240

Query: 184 ETNDFSEMIAEILEDMVITEKKQTNKGSSKSSKCKTQPDACNNNIEKLFNSDVGFTSSII 363
                       LEDM+ITEKK T+K S +S K K Q +   +NI K+ N D+GFTSSII
Sbjct: 241 ------------LEDMIITEKKNTSKQSLESLKLKFQTNVAAHNIGKVDNGDMGFTSSII 288

Query: 364 FGSEFDAALPKTC-----DVSELIAKQLEDVSIVEKTVTEAXXXXXXXXXXXXXANAGKS 528
            G++FDAAL K+C     D SELIAKQLE+V + EK   +              A+  K+
Sbjct: 289 VGNDFDAALSKSCVVSTQDASELIAKQLEEVVLAEKKKKKVKKSKSSSSNARKIASGRKN 348

Query: 529 DKLDFQSIVIIGDXXXXXXXXXXXXXXXXXXXXXAKESEDNVHIKNKTESTSHVESVDVM 708
           DK+DFQS +I GD                     + +   NVH+KNKTE   + ES DVM
Sbjct: 349 DKIDFQSTIITGD-----LVNVTSGTSSTSSLDSSSKDSVNVHVKNKTEPLGYGESDDVM 403

Query: 709 CWEGANSEKKEVSHKTGLKPSLKTSRSKRGNRSVKWANERNNEALEDK 852
              G + EKK VS +  LK SLKTSRSK GNRSVKWA+E   E LEDK
Sbjct: 404 LSGGVSMEKKHVSQENELKSSLKTSRSKGGNRSVKWADEVILEVLEDK 451


>ref|XP_009389521.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Musa acuminata subsp. malaccensis]
          Length = 668

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 56/184 (30%), Positives = 79/184 (42%), Gaps = 5/184 (2%)
 Frame = +1

Query: 316 IEKLFNSDVGFTSSIIFGSEFDAALPK---TCDVSELIAKQLEDVSIVEKTV-TEAXXXX 483
           +E     +V F S++I  +E D        T D SE IAK+LE+V + EK   T      
Sbjct: 200 VEDAAPGEVEFESAVILENEDDGLAYSSRGTVDASEAIAKKLEEVLLEEKKAKTTKSASK 259

Query: 484 XXXXXXXXXANAGKSDKLDFQSIVIIGDXXXXXXXXXXXXXXXXXXXXXAKESEDNVHIK 663
                    +   K+ K++F S +I+G+                          D   + 
Sbjct: 260 SSKSKASKHSKKNKTHKVEFMSTIIVGEQVPPGSSAAAQNTPKLDYTSTTFVG-DKESLI 318

Query: 664 NKTESTSHVESVDVMCWEGANSEKKEVSHKTG-LKPSLKTSRSKRGNRSVKWANERNNEA 840
           ++ +S  H+ES           EKK    K   LK SLKTSRSK   RSVKWA+ER N A
Sbjct: 319 SELDSGIHMESTTGSQKVAYEFEKKVSMDKGSVLKSSLKTSRSKNAGRSVKWADERENMA 378

Query: 841 LEDK 852
            E++
Sbjct: 379 QEER 382


>ref|XP_010921352.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Elaeis guineensis]
          Length = 681

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
 Frame = +1

Query: 307 NNNIEKLFNSDVGFTSSIIFGSEFDAALPK---TCDVSELIAKQLEDVSIVE-KTVTEAX 474
           +  +E +   ++ FTS++I   + D        T DVSE IAK+LED+ ++E KT     
Sbjct: 198 SKRVEAVRQGELDFTSTMIVEDKLDGFSSSSVCTQDVSEAIAKKLEDMDLLEKKTKATKT 257

Query: 475 XXXXXXXXXXXXANAGKSDKLDFQSIVIIGD------XXXXXXXXXXXXXXXXXXXXXAK 636
                        N  K++++DF+S++++GD                           +K
Sbjct: 258 SSKSLKAKPTRKVNKSKNNQMDFKSVIVMGDEAQTSSVSTKNHSEQFDFTSPMIIDQPSK 317

Query: 637 ES--EDNVHIKNKTESTSHVESVDVMCWEGANSEKKEVSHKTGLKPSLKTSRSKRGNRSV 810
            S  E + ++ N+    + +ES+++   E  +  K E   +T LK SLK + SK G ++V
Sbjct: 318 TSFVELDNNLNNEVHLENELESLEIAQKELKDRVKME-KKETALKSSLKAAGSKVGRQTV 376

Query: 811 KWANERNNEALEDK 852
           KWA+   ++A E++
Sbjct: 377 KWADMEKDKAPEER 390


>ref|XP_020087324.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
           isoform X2 [Ananas comosus]
          Length = 607

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 49/130 (37%), Positives = 66/130 (50%)
 Frame = +1

Query: 61  TTVTVGDKIDGALSKGSTATTNDISEVIAKKFKDVVITEKKETNDFSEMIAEILEDMVIT 240
           TT  VGD++DG  S   +  T DISE IAKK +D+ + EKK                   
Sbjct: 218 TTGFVGDEVDGVSSW--SIRTQDISEGIAKKLEDMALEEKK------------------I 257

Query: 241 EKKQTNKGSSKSSKCKTQPDACNNNIEKLFNSDVGFTSSIIFGSEFDAALPKTCDVSELI 420
           +K++T K SSKSSK K    A  +      +S+V FTS II G+E      KT +  ++ 
Sbjct: 258 KKQKTTKSSSKSSKPKQTKKASGSK-----SSEVDFTSVIIVGNETST---KTPNFGQID 309

Query: 421 AKQLEDVSIV 450
           AKQL+  S V
Sbjct: 310 AKQLDVRSAV 319


>ref|XP_020087323.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
           isoform X1 [Ananas comosus]
          Length = 673

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 49/130 (37%), Positives = 66/130 (50%)
 Frame = +1

Query: 61  TTVTVGDKIDGALSKGSTATTNDISEVIAKKFKDVVITEKKETNDFSEMIAEILEDMVIT 240
           TT  VGD++DG  S   +  T DISE IAKK +D+ + EKK                   
Sbjct: 218 TTGFVGDEVDGVSSW--SIRTQDISEGIAKKLEDMALEEKK------------------I 257

Query: 241 EKKQTNKGSSKSSKCKTQPDACNNNIEKLFNSDVGFTSSIIFGSEFDAALPKTCDVSELI 420
           +K++T K SSKSSK K    A  +      +S+V FTS II G+E      KT +  ++ 
Sbjct: 258 KKQKTTKSSSKSSKPKQTKKASGSK-----SSEVDFTSVIIVGNETST---KTPNFGQID 309

Query: 421 AKQLEDVSIV 450
           AKQL+  S V
Sbjct: 310 AKQLDVRSAV 319