BLASTX nr result

ID: Ophiopogon24_contig00014486 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00014486
         (525 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273885.1| LOW QUALITY PROTEIN: thylakoidal processing ...    81   1e-14
gb|ONK64890.1| uncharacterized protein A4U43_C07F31140 [Asparagu...    68   5e-10
ref|XP_010255087.1| PREDICTED: thylakoidal processing peptidase ...    61   9e-08

>ref|XP_020273885.1| LOW QUALITY PROTEIN: thylakoidal processing peptidase 1,
           chloroplastic-like [Asparagus officinalis]
          Length = 408

 Score = 80.9 bits (198), Expect = 1e-14
 Identities = 63/141 (44%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
 Frame = +3

Query: 129 MAIRFSVAFSGYAARNLAASAGIRYRNCRVIHESACGRSISLFANRRLDDDPNLAXXXXX 308
           MAIR + +FSGY A+ L     IRY NCR        RS+ LFAN+RLDDDPN+      
Sbjct: 1   MAIRITFSFSGYVAQTLPP---IRYGNCR--------RSLCLFANQRLDDDPNVTKSRAR 49

Query: 309 XXXXXXXXXXXXXXXXEASTLAGDR-------KPKAQATHSPA--KYSTLAGSNLSVVSK 461
                           + S   GDR       K KAQA H+PA  KYSTLA        K
Sbjct: 50  DRDWDRNRYRSKPQSSKFSCFTGDRTRSTAQEKSKAQA-HAPATVKYSTLA-------PK 101

Query: 462 GSRLASPTASLISAMASGSGA 524
           GSR A+ T SLISA+ SGSGA
Sbjct: 102 GSRPANITVSLISAVVSGSGA 122


>gb|ONK64890.1| uncharacterized protein A4U43_C07F31140 [Asparagus officinalis]
          Length = 601

 Score = 67.8 bits (164), Expect = 5e-10
 Identities = 54/122 (44%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
 Frame = +3

Query: 186 SAGIRYRNCRVIHESACGRSISLFANRRLDDDPNLAXXXXXXXXXXXXXXXXXXXXXEAS 365
           S  IRY NCR        RS+ LFAN+RLDDDPN+                      + S
Sbjct: 113 SPPIRYGNCR--------RSLCLFANQRLDDDPNVTKSRARDRDWDRNRYRSKPQSSKFS 164

Query: 366 TLAGDR-------KPKAQATHSPA--KYSTLAGSNLSVVSKGSRLASPTASLISAMASGS 518
              GDR       K KAQA H+PA  KYSTLA        KGSR A+ T SLISA+ SGS
Sbjct: 165 CFTGDRTRSTAQEKSKAQA-HAPATVKYSTLA-------PKGSRPANITVSLISAVVSGS 216

Query: 519 GA 524
           GA
Sbjct: 217 GA 218


>ref|XP_010255087.1| PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like
           [Nelumbo nucifera]
          Length = 393

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 31/55 (56%), Positives = 39/55 (70%)
 Frame = +3

Query: 129 MAIRFSVAFSGYAARNLAASAGIRYRNCRVIHESACGRSISLFANRRLDDDPNLA 293
           MAIR +V +S Y A+NLA+S GIR  NCR+ HE  CGRS  LF+N++ D DP  A
Sbjct: 1   MAIRITVTYSSYLAQNLASSVGIRTGNCRLFHE-CCGRSRFLFSNQKSDVDPAAA 54


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