BLASTX nr result

ID: Ophiopogon24_contig00014477 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00014477
         (391 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK55458.1| uncharacterized protein A4U43_UnF2940 [Asparagus ...    59   2e-07
gb|PKA65222.1| ABC transporter B family member 1 [Apostasia shen...    57   9e-07
ref|XP_019187118.1| PREDICTED: ABC transporter B family member 1...    55   6e-06

>gb|ONK55458.1| uncharacterized protein A4U43_UnF2940 [Asparagus officinalis]
          Length = 436

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 45/103 (43%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
 Frame = -2

Query: 279 ESNGGGENLDRPEMQGFHLSS---SLDPNEEDLLVIELGEKXXXXXXXXXXXXXXXXXXQ 109
           ES    ENLDRPEMQ FHL S   S    + DL+VIELGEK                   
Sbjct: 5   ESKSNVENLDRPEMQRFHLCSPPRSPSSPDPDLVVIELGEK-----------QEEQEEAG 53

Query: 108 AATSSAGRKIDGEKPAP-------PPPAVGFGELFRFADGLDL 1
           A   S G     EK AP          AV F ELFRFADG+DL
Sbjct: 54  AGHRSGGEGSGAEKRAPAAGKAEAAAEAVKFAELFRFADGVDL 96


>gb|PKA65222.1| ABC transporter B family member 1 [Apostasia shenzhenica]
          Length = 1353

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 37/93 (39%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
 Frame = -2

Query: 279 ESNGGGENLDRPEMQGFHLSS-SLDPNEEDLLVIELGEKXXXXXXXXXXXXXXXXXXQAA 103
           E     E+L RPEMQGFHL S +  PN ++ LVIEL  K                     
Sbjct: 9   ELKRSAEHLSRPEMQGFHLCSLAKSPNLQEDLVIELAGKRELREEDIELSAARGAADSGL 68

Query: 102 TSSAGRKIDGEKPAPPPPAVGFGELFRFADGLD 4
            + A      E+    P AV FGELF FADGLD
Sbjct: 69  ETKASNMGKDEQAQTSPAAVSFGELFLFADGLD 101


>ref|XP_019187118.1| PREDICTED: ABC transporter B family member 1 [Ipomoea nil]
          Length = 1355

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -2

Query: 108 AATSSAGRKIDGEKPAPPPPAVGFGELFRFADGLD 4
           AAT++A    DGEKP+ PPPAVGFGELFRFADGLD
Sbjct: 77  AATATATG--DGEKPSSPPPAVGFGELFRFADGLD 109


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