BLASTX nr result
ID: Ophiopogon24_contig00014289
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00014289
(353 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018467020.1| PREDICTED: cleavage and polyadenylation spec... 209 2e-66
ref|XP_020079753.1| cleavage and polyadenylation specificity fac... 221 4e-66
ref|XP_010255376.1| PREDICTED: cleavage and polyadenylation spec... 219 4e-65
ref|XP_020682991.1| cleavage and polyadenylation specificity fac... 216 2e-64
gb|OVA14042.1| Beta-lactamase-like [Macleaya cordata] 216 4e-64
ref|XP_020682990.1| cleavage and polyadenylation specificity fac... 216 6e-64
gb|PKA58817.1| Cleavage and polyadenylation specificity factor s... 216 6e-64
gb|PKU64456.1| Cleavage and polyadenylation specificity factor s... 216 7e-64
gb|EYU19553.1| hypothetical protein MIMGU_mgv1a0019021mg, partia... 201 2e-63
emb|CDP05186.1| unnamed protein product [Coffea canephora] 201 8e-63
ref|XP_009401035.1| PREDICTED: cleavage and polyadenylation spec... 212 1e-62
ref|XP_008787501.1| PREDICTED: cleavage and polyadenylation spec... 211 2e-62
ref|XP_013599219.1| PREDICTED: cleavage and polyadenylation spec... 211 3e-62
dbj|GAU49658.1| hypothetical protein TSUD_291560 [Trifolium subt... 202 4e-62
ref|XP_020877897.1| cleavage and polyadenylation specificity fac... 210 6e-62
ref|XP_010934798.1| PREDICTED: cleavage and polyadenylation spec... 210 6e-62
gb|EFH48339.1| CPSF100 [Arabidopsis lyrata subsp. lyrata] 210 6e-62
gb|OAO92380.1| ESP5 [Arabidopsis thaliana] 210 8e-62
ref|NP_197776.1| cleavage and polyadenylation specificity factor... 210 8e-62
ref|XP_022543373.1| cleavage and polyadenylation specificity fac... 209 1e-61
>ref|XP_018467020.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like [Raphanus sativus]
Length = 226
Score = 209 bits (531), Expect = 2e-66
Identities = 97/117 (82%), Positives = 111/117 (94%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
L YL+SIDGFNFL+DCGWNDLFD +LL+PLS+VAS+IDAVL+SHPD LH+GALPYAMKQL
Sbjct: 19 LSYLVSIDGFNFLLDCGWNDLFDPSLLEPLSRVASTIDAVLLSHPDTLHLGALPYAMKQL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPVY TEPVHRLGLLTMYD Y++R+Q+SDFDLFTLDDIDSAFQNV RLT+SQN+
Sbjct: 79 GLSAPVYATEPVHRLGLLTMYDQYLSRKQVSDFDLFTLDDIDSAFQNVIRLTFSQNY 135
>ref|XP_020079753.1| cleavage and polyadenylation specificity factor subunit 2 isoform
X1 [Ananas comosus]
gb|OAY76565.1| Cleavage and polyadenylation specificity factor subunit 2 [Ananas
comosus]
Length = 740
Score = 221 bits (564), Expect = 4e-66
Identities = 103/117 (88%), Positives = 114/117 (97%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLS+VAS +DAVL+SHPDILH+GALPYAMK L
Sbjct: 19 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSRVASKVDAVLLSHPDILHLGALPYAMKHL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPVY+TEPV+RLGLLTMYDHY++RRQISDFDLF+LDDID+AFQNVTRL YSQN+
Sbjct: 79 GLSAPVYSTEPVYRLGLLTMYDHYLSRRQISDFDLFSLDDIDAAFQNVTRLKYSQNY 135
>ref|XP_010255376.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2 [Nelumbo nucifera]
Length = 739
Score = 219 bits (557), Expect = 4e-65
Identities = 100/117 (85%), Positives = 114/117 (97%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
LCYLLSIDGFNFL+DCGWNDLFD +LLQPLS+++S+IDAVL+SHPDILH+GALPYAMK L
Sbjct: 19 LCYLLSIDGFNFLVDCGWNDLFDTSLLQPLSRISSTIDAVLLSHPDILHLGALPYAMKHL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
LSAPVY+TEPV+RLGLLTMYDHY++R+Q+SDFDLFTLDDIDSAFQNVTRLTYSQNH
Sbjct: 79 ALSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDLFTLDDIDSAFQNVTRLTYSQNH 135
>ref|XP_020682991.1| cleavage and polyadenylation specificity factor subunit 2 isoform
X2 [Dendrobium catenatum]
Length = 682
Score = 216 bits (549), Expect = 2e-64
Identities = 100/117 (85%), Positives = 113/117 (96%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
LCYLLSIDGFNFLMDCGWNDL D NLLQPLSKV+S++DAVL+SHPD+LHIGALPYA+K L
Sbjct: 19 LCYLLSIDGFNFLMDCGWNDLCDTNLLQPLSKVSSTVDAVLLSHPDMLHIGALPYAIKHL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPVY TEPV+RLGLLTMYD+Y++RRQ+SDFDL+TLDDIDSAFQNVTRLTYSQN+
Sbjct: 79 GLSAPVYATEPVYRLGLLTMYDYYLSRRQVSDFDLYTLDDIDSAFQNVTRLTYSQNY 135
>gb|OVA14042.1| Beta-lactamase-like [Macleaya cordata]
Length = 740
Score = 216 bits (550), Expect = 4e-64
Identities = 98/117 (83%), Positives = 114/117 (97%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
LCYLLSIDGFNFL+DCGWNDLFD NLLQPLS+++S+IDAVL+SHPD LH+GALPYAMK L
Sbjct: 19 LCYLLSIDGFNFLVDCGWNDLFDTNLLQPLSRISSTIDAVLLSHPDTLHLGALPYAMKHL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPV++TEPV+RLGLLTMYDHY++R+Q+SDFDLF+LDDIDSAFQ+VTRLTYSQNH
Sbjct: 79 GLSAPVFSTEPVYRLGLLTMYDHYLSRKQVSDFDLFSLDDIDSAFQSVTRLTYSQNH 135
>ref|XP_020682990.1| cleavage and polyadenylation specificity factor subunit 2 isoform
X1 [Dendrobium catenatum]
Length = 737
Score = 216 bits (549), Expect = 6e-64
Identities = 100/117 (85%), Positives = 113/117 (96%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
LCYLLSIDGFNFLMDCGWNDL D NLLQPLSKV+S++DAVL+SHPD+LHIGALPYA+K L
Sbjct: 19 LCYLLSIDGFNFLMDCGWNDLCDTNLLQPLSKVSSTVDAVLLSHPDMLHIGALPYAIKHL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPVY TEPV+RLGLLTMYD+Y++RRQ+SDFDL+TLDDIDSAFQNVTRLTYSQN+
Sbjct: 79 GLSAPVYATEPVYRLGLLTMYDYYLSRRQVSDFDLYTLDDIDSAFQNVTRLTYSQNY 135
>gb|PKA58817.1| Cleavage and polyadenylation specificity factor subunit 2
[Apostasia shenzhenica]
Length = 738
Score = 216 bits (549), Expect = 6e-64
Identities = 100/117 (85%), Positives = 115/117 (98%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
LCY+LSIDGFNFLMDCGWNDL DLNLLQPL++V+S+IDAVLISHPDILHIGALPYA+KQL
Sbjct: 19 LCYMLSIDGFNFLMDCGWNDLCDLNLLQPLTRVSSTIDAVLISHPDILHIGALPYALKQL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPVY TEPV+RLGLLT+YD+Y+++RQ+SDFDLFTLDDIDSAFQNVTRLTYSQ++
Sbjct: 79 GLSAPVYATEPVYRLGLLTLYDYYLSQRQVSDFDLFTLDDIDSAFQNVTRLTYSQSY 135
>gb|PKU64456.1| Cleavage and polyadenylation specificity factor subunit 2
[Dendrobium catenatum]
Length = 750
Score = 216 bits (549), Expect = 7e-64
Identities = 100/117 (85%), Positives = 113/117 (96%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
LCYLLSIDGFNFLMDCGWNDL D NLLQPLSKV+S++DAVL+SHPD+LHIGALPYA+K L
Sbjct: 19 LCYLLSIDGFNFLMDCGWNDLCDTNLLQPLSKVSSTVDAVLLSHPDMLHIGALPYAIKHL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPVY TEPV+RLGLLTMYD+Y++RRQ+SDFDL+TLDDIDSAFQNVTRLTYSQN+
Sbjct: 79 GLSAPVYATEPVYRLGLLTMYDYYLSRRQVSDFDLYTLDDIDSAFQNVTRLTYSQNY 135
>gb|EYU19553.1| hypothetical protein MIMGU_mgv1a0019021mg, partial [Erythranthe
guttata]
Length = 220
Score = 201 bits (511), Expect = 2e-63
Identities = 91/117 (77%), Positives = 110/117 (94%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
L YL+SIDGFNFL+DCGWND FD +LL+PLS+VAS++DAVL+SHPD LH+G+LPYAMKQL
Sbjct: 19 LSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLLSHPDTLHLGSLPYAMKQL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPV+ TEPV+RLGLLTMYDHY++R+Q+S+FDLFTLDDIDSAFQN+TRL SQN+
Sbjct: 79 GLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDIDSAFQNITRLNQSQNY 135
>emb|CDP05186.1| unnamed protein product [Coffea canephora]
Length = 257
Score = 201 bits (510), Expect = 8e-63
Identities = 90/117 (76%), Positives = 110/117 (94%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
L YL+S+DGFNFL+DCGWND FD +LL+PLS+VA ++DAVL+SH D LH+GALPYAMK+L
Sbjct: 19 LAYLVSVDGFNFLVDCGWNDHFDASLLEPLSRVAPTVDAVLLSHSDTLHLGALPYAMKKL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPV+ TEPV+RLGLLTMYDHY++R+Q+S+FDLFTLDDIDSAFQN+TRLTYSQN+
Sbjct: 79 GLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDIDSAFQNITRLTYSQNY 135
>ref|XP_009401035.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2 [Musa acuminata subsp. malaccensis]
Length = 735
Score = 212 bits (540), Expect = 1e-62
Identities = 97/116 (83%), Positives = 112/116 (96%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
LCYLLSIDGFNFLMDCGWND FD NLLQPLS+V++ +DAVL+SHPD+LH+GALPYAMK L
Sbjct: 19 LCYLLSIDGFNFLMDCGWNDHFDPNLLQPLSRVSTKVDAVLLSHPDVLHLGALPYAMKHL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQN 6
GL++PVY+TEPV+RLGLLTMYDHY++RRQISDFDLFTLDDID+AFQNVTRLTYSQ+
Sbjct: 79 GLTSPVYSTEPVYRLGLLTMYDHYLSRRQISDFDLFTLDDIDTAFQNVTRLTYSQS 134
>ref|XP_008787501.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2 [Phoenix dactylifera]
Length = 739
Score = 211 bits (538), Expect = 2e-62
Identities = 98/117 (83%), Positives = 111/117 (94%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
LCYLLSIDGFNFLMDCGWNDLFD NLL+PL++VA IDAVL+SHPDILH+GALPYAMK
Sbjct: 19 LCYLLSIDGFNFLMDCGWNDLFDENLLKPLARVAPKIDAVLLSHPDILHLGALPYAMKHF 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
LSAPVY+TEPV+RLGLLTMYDHY++RRQ+SDF+LFTLDDID+AFQNVTRLTYSQN+
Sbjct: 79 KLSAPVYSTEPVYRLGLLTMYDHYLSRRQVSDFNLFTLDDIDTAFQNVTRLTYSQNY 135
>ref|XP_013599219.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2 [Brassica oleracea var. oleracea]
ref|XP_013643469.2| cleavage and polyadenylation specificity factor subunit 2 [Brassica
napus]
Length = 739
Score = 211 bits (537), Expect = 3e-62
Identities = 97/117 (82%), Positives = 111/117 (94%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
L YL+SIDGFNFL+DCGWNDLFD +LL+PLS+VAS++DAVL+SHPD LH+GALPYAMKQL
Sbjct: 19 LAYLVSIDGFNFLLDCGWNDLFDTSLLEPLSRVASTVDAVLLSHPDTLHLGALPYAMKQL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPVY TEPVHRLGLLTMYD Y++R+Q+SDFDLFTLDDIDSAFQNV RLTYSQN+
Sbjct: 79 GLSAPVYATEPVHRLGLLTMYDQYLSRKQVSDFDLFTLDDIDSAFQNVIRLTYSQNY 135
>dbj|GAU49658.1| hypothetical protein TSUD_291560 [Trifolium subterraneum]
Length = 361
Score = 202 bits (514), Expect = 4e-62
Identities = 94/117 (80%), Positives = 111/117 (94%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
L YL+SIDGFN L+DCGWND FD +LLQPLS+VAS+IDAVL+SHPD LH+GALPYA+KQL
Sbjct: 19 LSYLVSIDGFNLLIDCGWNDHFDPSLLQPLSRVASTIDAVLLSHPDTLHLGALPYAIKQL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPVY+TEPV+RLGLLTMYD +++R+Q+S+FDLFTLDDIDSAFQ+VTRLTYSQNH
Sbjct: 79 GLSAPVYSTEPVYRLGLLTMYDQFLSRKQVSEFDLFTLDDIDSAFQSVTRLTYSQNH 135
>ref|XP_020877897.1| cleavage and polyadenylation specificity factor subunit 2
[Arabidopsis lyrata subsp. lyrata]
Length = 739
Score = 210 bits (535), Expect = 6e-62
Identities = 98/117 (83%), Positives = 111/117 (94%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
L YL+SIDGFNFL+DCGWNDLFD +LL+PLS+VASSIDAVL+SHPD LH+GALPYAMKQL
Sbjct: 19 LSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASSIDAVLLSHPDTLHLGALPYAMKQL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPVY TEPVHRLGLLTMYD +++R+Q+SDFDLFTLDDIDSAFQNV RLTYSQN+
Sbjct: 79 GLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDIDSAFQNVIRLTYSQNY 135
>ref|XP_010934798.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2 [Elaeis guineensis]
Length = 739
Score = 210 bits (535), Expect = 6e-62
Identities = 97/117 (82%), Positives = 111/117 (94%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
LCYLLSIDGFNFLMDCGWNDLFD NLL+PL+++A IDAVL+SHPDILH+GALPYAMK
Sbjct: 19 LCYLLSIDGFNFLMDCGWNDLFDENLLKPLARLAPKIDAVLLSHPDILHLGALPYAMKHF 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
LSAPVY+TEPV+RLGLLTMYDHY++RRQ+SDF+LFTLDDID+AFQNVTRLTYSQN+
Sbjct: 79 KLSAPVYSTEPVYRLGLLTMYDHYLSRRQVSDFNLFTLDDIDTAFQNVTRLTYSQNY 135
>gb|EFH48339.1| CPSF100 [Arabidopsis lyrata subsp. lyrata]
Length = 739
Score = 210 bits (535), Expect = 6e-62
Identities = 98/117 (83%), Positives = 111/117 (94%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
L YL+SIDGFNFL+DCGWNDLFD +LL+PLS+VASSIDAVL+SHPD LH+GALPYAMKQL
Sbjct: 19 LSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASSIDAVLLSHPDTLHLGALPYAMKQL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPVY TEPVHRLGLLTMYD +++R+Q+SDFDLFTLDDIDSAFQNV RLTYSQN+
Sbjct: 79 GLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDIDSAFQNVIRLTYSQNY 135
>gb|OAO92380.1| ESP5 [Arabidopsis thaliana]
Length = 739
Score = 210 bits (534), Expect = 8e-62
Identities = 98/117 (83%), Positives = 111/117 (94%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
L YL+SIDGFNFL+DCGWNDLFD +LL+PLS+VAS+IDAVL+SHPD LHIGALPYAMKQL
Sbjct: 19 LSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLLSHPDTLHIGALPYAMKQL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPVY TEPVHRLGLLTMYD +++R+Q+SDFDLFTLDDIDSAFQNV RLTYSQN+
Sbjct: 79 GLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDIDSAFQNVIRLTYSQNY 135
>ref|NP_197776.1| cleavage and polyadenylation specificity factor 100 [Arabidopsis
thaliana]
sp|Q9LKF9.2|CPSF2_ARATH RecName: Full=Cleavage and polyadenylation specificity factor
subunit 2; AltName: Full=Cleavage and polyadenylation
specificity factor 100 kDa subunit; Short=AtCPSF100;
Short=CPSF 100 kDa subunit; AltName: Full=Protein EMBRYO
DEFECTIVE 1265; AltName: Full=Protein ENHANCED SILENCING
PHENOTYPE 5
dbj|BAB10061.1| cleavage and polyadenylation specificity factor [Arabidopsis
thaliana]
gb|AAK59487.1| putative cleavage and polyadenylation specificity factor
[Arabidopsis thaliana]
gb|AAO42368.1| putative cleavage and polyadenylation specificity factor
[Arabidopsis thaliana]
gb|AED93228.1| cleavage and polyadenylation specificity factor 100 [Arabidopsis
thaliana]
Length = 739
Score = 210 bits (534), Expect = 8e-62
Identities = 98/117 (83%), Positives = 111/117 (94%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
L YL+SIDGFNFL+DCGWNDLFD +LL+PLS+VAS+IDAVL+SHPD LHIGALPYAMKQL
Sbjct: 19 LSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLLSHPDTLHIGALPYAMKQL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQNH 3
GLSAPVY TEPVHRLGLLTMYD +++R+Q+SDFDLFTLDDIDSAFQNV RLTYSQN+
Sbjct: 79 GLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDIDSAFQNVIRLTYSQNY 135
>ref|XP_022543373.1| cleavage and polyadenylation specificity factor subunit 2-like
[Brassica napus]
Length = 739
Score = 209 bits (533), Expect = 1e-61
Identities = 97/116 (83%), Positives = 110/116 (94%)
Frame = -1
Query: 353 LCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSKVASSIDAVLISHPDILHIGALPYAMKQL 174
L YL+SIDGFNFL+DCGWNDLFD +LL+PLS+VAS++DAVL+SHPD LH+GALPYAMKQL
Sbjct: 19 LAYLVSIDGFNFLLDCGWNDLFDPSLLEPLSRVASTVDAVLLSHPDTLHLGALPYAMKQL 78
Query: 173 GLSAPVYTTEPVHRLGLLTMYDHYIARRQISDFDLFTLDDIDSAFQNVTRLTYSQN 6
GLSAPVY TEPVHRLGLLTMYD Y++R+Q+SDFDLFTLDDIDSAFQNV RLTYSQN
Sbjct: 79 GLSAPVYATEPVHRLGLLTMYDQYLSRKQVSDFDLFTLDDIDSAFQNVIRLTYSQN 134