BLASTX nr result
ID: Ophiopogon24_contig00013743
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00013743
(419 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020254341.1| pentatricopeptide repeat-containing protein ... 68 2e-12
gb|ONK78743.1| uncharacterized protein A4U43_C02F21960 [Asparagu... 68 2e-12
ref|XP_022680713.1| pentatricopeptide repeat-containing protein ... 62 7e-10
ref|XP_015620361.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-09
ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-09
gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japo... 61 1e-09
dbj|BAF30046.1| Os12g0562300, partial [Oryza sativa Japonica Gro... 61 1e-09
gb|ABA98950.2| expressed protein [Oryza sativa Japonica Group] 61 1e-09
ref|XP_002442324.2| pentatricopeptide repeat-containing protein ... 61 1e-09
ref|XP_020164531.1| pentatricopeptide repeat-containing protein ... 56 5e-09
ref|XP_008809274.2| PREDICTED: pentatricopeptide repeat-containi... 56 5e-09
gb|PAN21386.1| hypothetical protein PAHAL_I04576 [Panicum hallii] 58 1e-08
ref|XP_010914579.1| PREDICTED: pentatricopeptide repeat-containi... 59 1e-08
gb|OAY69128.1| Pentatricopeptide repeat-containing protein, chlo... 56 2e-08
ref|XP_020101914.1| pentatricopeptide repeat-containing protein ... 56 2e-08
ref|XP_006664642.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-08
gb|PKA51558.1| Pentatricopeptide repeat-containing protein [Apos... 54 6e-08
ref|XP_008660445.1| pentatricopeptide repeat-containing protein ... 55 1e-07
ref|XP_009381720.1| PREDICTED: pentatricopeptide repeat-containi... 52 3e-07
ref|XP_020581196.1| pentatricopeptide repeat-containing protein ... 50 7e-06
>ref|XP_020254341.1| pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Asparagus officinalis]
Length = 772
Score = 67.8 bits (164), Expect(2) = 2e-12
Identities = 37/58 (63%), Positives = 43/58 (74%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +LKSI A F QL RFN RFVSP +VIA+WLR+ TISILLLRDER + A P N
Sbjct: 707 IESLLKSIGAPF--QLERFNIGRFVSPSAVIASWLRESGTISILLLRDERTRTANPEN 762
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHSK+VGA TL
Sbjct: 687 ILTGWGKHSKVVGASTL 703
>gb|ONK78743.1| uncharacterized protein A4U43_C02F21960 [Asparagus officinalis]
Length = 586
Score = 67.8 bits (164), Expect(2) = 2e-12
Identities = 37/58 (63%), Positives = 43/58 (74%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +LKSI A F QL RFN RFVSP +VIA+WLR+ TISILLLRDER + A P N
Sbjct: 521 IESLLKSIGAPF--QLERFNIGRFVSPSAVIASWLRESGTISILLLRDERTRTANPEN 576
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHSK+VGA TL
Sbjct: 501 ILTGWGKHSKVVGASTL 517
>ref|XP_022680713.1| pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Setaria italica]
gb|KQL16599.1| hypothetical protein SETIT_021190mg [Setaria italica]
Length = 867
Score = 61.6 bits (148), Expect(2) = 7e-10
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +L SI A F Q+ RFN RFVSP +V+A WLR+ TI+ILLLR+ER+Q A P N
Sbjct: 802 IEALLLSIGAPF--QVERFNIGRFVSPSAVVAAWLRESGTINILLLRNERVQHANPPN 857
Score = 29.3 bits (64), Expect(2) = 7e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHSKI G+ TL
Sbjct: 782 ILTGWGKHSKIAGSSTL 798
>ref|XP_015620361.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Oryza sativa Japonica Group]
Length = 869
Score = 61.2 bits (147), Expect(2) = 1e-09
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +L SI A F Q+ RFN RFVSP +V+A WLR+ T +ILLL DER+Q A P+N
Sbjct: 804 IEALLNSIGAPF--QVERFNIGRFVSPSAVVAAWLRESGTFNILLLHDERVQQAAPSN 859
Score = 29.3 bits (64), Expect(2) = 1e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHS+I GA TL
Sbjct: 784 ILTGWGKHSRIAGASTL 800
>ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Brachypodium distachyon]
gb|KQJ86279.1| hypothetical protein BRADI_4g04460v3 [Brachypodium distachyon]
Length = 858
Score = 58.2 bits (139), Expect(2) = 1e-09
Identities = 31/58 (53%), Positives = 41/58 (70%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +L SI A F Q+ RFN RFVSP +V+A WLR+ T++ILLL DER Q A P++
Sbjct: 793 IEALLNSIGAPF--QVERFNIGRFVSPSAVVAAWLRESGTMNILLLNDERAQHASPSS 848
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTLCH 65
ILTG GKHSKI GA TL H
Sbjct: 773 ILTGWGKHSKIAGASTLRH 791
>gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 61.2 bits (147), Expect(2) = 1e-09
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +L SI A F Q+ RFN RFVSP +V+A WLR+ T +ILLL DER+Q A P+N
Sbjct: 542 IEALLNSIGAPF--QVERFNIGRFVSPSAVVAAWLRESGTFNILLLHDERVQQAAPSN 597
Score = 29.3 bits (64), Expect(2) = 1e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHS+I GA TL
Sbjct: 522 ILTGWGKHSRIAGASTL 538
>dbj|BAF30046.1| Os12g0562300, partial [Oryza sativa Japonica Group]
dbj|BAT17653.1| Os12g0562300, partial [Oryza sativa Japonica Group]
Length = 306
Score = 61.2 bits (147), Expect(2) = 1e-09
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +L SI A F Q+ RFN RFVSP +V+A WLR+ T +ILLL DER+Q A P+N
Sbjct: 241 IEALLNSIGAPF--QVERFNIGRFVSPSAVVAAWLRESGTFNILLLHDERVQQAAPSN 296
Score = 29.3 bits (64), Expect(2) = 1e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHS+I GA TL
Sbjct: 221 ILTGWGKHSRIAGASTL 237
>gb|ABA98950.2| expressed protein [Oryza sativa Japonica Group]
Length = 295
Score = 61.2 bits (147), Expect(2) = 1e-09
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +L SI A F Q+ RFN RFVSP +V+A WLR+ T +ILLL DER+Q A P+N
Sbjct: 230 IEALLNSIGAPF--QVERFNIGRFVSPSAVVAAWLRESGTFNILLLHDERVQQAAPSN 285
Score = 29.3 bits (64), Expect(2) = 1e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHS+I GA TL
Sbjct: 210 ILTGWGKHSRIAGASTL 226
>ref|XP_002442324.2| pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Sorghum bicolor]
gb|EES16159.2| hypothetical protein SORBI_3008G130000 [Sorghum bicolor]
Length = 872
Score = 60.8 bits (146), Expect(2) = 1e-09
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +L SI A F Q+ RFN RFVSP +++A WLR+ T++ILLLR+ER+Q A P+N
Sbjct: 807 IEALLLSIGAPF--QVERFNIGRFVSPSALVAAWLRESGTVNILLLRNERVQHANPSN 862
Score = 29.3 bits (64), Expect(2) = 1e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHSKI G+ TL
Sbjct: 787 ILTGWGKHSKIAGSSTL 803
>ref|XP_020164531.1| pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Aegilops tauschii subsp. tauschii]
ref|XP_020164532.1| pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Aegilops tauschii subsp. tauschii]
Length = 856
Score = 55.8 bits (133), Expect(2) = 5e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +L SI A F Q+ RFN RFVSP V+A WL++ TI+ +LL DER Q A P+N
Sbjct: 791 IEALLNSIGAPF--QVERFNIGRFVSPSVVVAAWLKESGTINTILLSDERAQRASPSN 846
Score = 32.3 bits (72), Expect(2) = 5e-09
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTLCH 65
ILTG GKHSKI GA TL H
Sbjct: 771 ILTGWGKHSKIAGASTLRH 789
>ref|XP_008809274.2| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic, partial [Phoenix dactylifera]
Length = 766
Score = 55.8 bits (133), Expect(2) = 5e-09
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +1
Query: 79 MLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQ 225
+L SI A F L+ RFN RFVSP +++A WLR+ TISILLLRDER+Q
Sbjct: 704 LLDSIGAPFNLE--RFNIGRFVSPGAMVAAWLREPGTISILLLRDERVQ 750
Score = 32.3 bits (72), Expect(2) = 5e-09
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTLCH 65
ILTG GKHSKI GA TL H
Sbjct: 681 ILTGWGKHSKIAGASTLRH 699
>gb|PAN21386.1| hypothetical protein PAHAL_I04576 [Panicum hallii]
Length = 869
Score = 57.8 bits (138), Expect(2) = 1e-08
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +L SI A F Q+ RFN RFVSP +V+A WLR+ TI+ILLLR+ER+Q A N
Sbjct: 804 IEALLLSIGAPF--QVERFNIGRFVSPSAVVAAWLRESGTINILLLRNERVQHANLPN 859
Score = 29.3 bits (64), Expect(2) = 1e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHSKI G+ TL
Sbjct: 784 ILTGWGKHSKIAGSSTL 800
>ref|XP_010914579.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Elaeis guineensis]
Length = 862
Score = 58.9 bits (141), Expect(2) = 1e-08
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +L SI A F L+ RFN RFVSP +++A WLR+ TI+ILLLRDER+Q + P++
Sbjct: 797 IEVLLDSIGAPFNLE--RFNIGRFVSPGAMVAAWLREPGTINILLLRDERVQHSSPSS 852
Score = 27.7 bits (60), Expect(2) = 1e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHSK GA TL
Sbjct: 777 ILTGWGKHSKRAGASTL 793
>gb|OAY69128.1| Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
comosus]
Length = 890
Score = 55.8 bits (133), Expect(2) = 2e-08
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQ 225
+E +L SI A F QL +FN RFVSP V+A WLR+ +TI++LLL DER++
Sbjct: 824 IESLLNSIGAPF--QLEKFNLGRFVSPGGVVAAWLRESNTINVLLLHDERVR 873
Score = 30.4 bits (67), Expect(2) = 2e-08
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHSKI GA TL
Sbjct: 804 ILTGWGKHSKIAGASTL 820
>ref|XP_020101914.1| pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Ananas comosus]
ref|XP_020101915.1| pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Ananas comosus]
ref|XP_020101916.1| pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Ananas comosus]
Length = 885
Score = 55.8 bits (133), Expect(2) = 2e-08
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQ 225
+E +L SI A F QL +FN RFVSP V+A WLR+ +TI++LLL DER++
Sbjct: 819 IESLLNSIGAPF--QLEKFNLGRFVSPGGVVAAWLRESNTINVLLLHDERVR 868
Score = 30.4 bits (67), Expect(2) = 2e-08
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHSKI GA TL
Sbjct: 799 ILTGWGKHSKIAGASTL 815
>ref|XP_006664642.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Oryza brachyantha]
Length = 744
Score = 57.0 bits (136), Expect(2) = 2e-08
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQ 225
+E +L SI A F Q+ RFN RFVSP +V+A WLR+ T++ILLL DER+Q
Sbjct: 675 IEALLNSIGAPF--QVERFNIGRFVSPSAVVAAWLRESGTVNILLLHDERVQ 724
Score = 29.3 bits (64), Expect(2) = 2e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHS+I GA TL
Sbjct: 655 ILTGWGKHSRIAGASTL 671
>gb|PKA51558.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 840
Score = 54.3 bits (129), Expect(2) = 6e-08
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQ 225
+E +L S+ A F L+ RFN RFVSP ++ A+WLR+ TI++LLL DER+Q
Sbjct: 774 IETLLNSLGAPFHLE--RFNIGRFVSPGTIAASWLRESGTITVLLLHDERLQ 823
Score = 30.0 bits (66), Expect(2) = 6e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHSK+ GA TL
Sbjct: 754 ILTGWGKHSKVTGASTL 770
>ref|XP_008660445.1| pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Zea mays]
gb|ONM01205.1| genomes uncoupled1 [Zea mays]
Length = 870
Score = 54.7 bits (130), Expect(2) = 1e-07
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +L SI A F Q RFN RFVSP ++++ WLR+ TI+ILLLR+ER Q A +N
Sbjct: 805 IEALLLSIGAPF--QAERFNIGRFVSPSALVSAWLRESGTINILLLRNERTQHANASN 860
Score = 28.9 bits (63), Expect(2) = 1e-07
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHSK+ G+ TL
Sbjct: 785 ILTGWGKHSKVAGSSTL 801
>ref|XP_009381720.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 874
Score = 52.0 bits (123), Expect(2) = 3e-07
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARPTN 243
+E +L S+ A F L+ +FN RFVS + + WLR+ T++ILLL D+R+Q A P N
Sbjct: 809 IETLLNSMGAPFHLE--KFNVGRFVSAGATVTAWLRESGTVNILLLHDKRVQSANPLN 864
Score = 30.0 bits (66), Expect(2) = 3e-07
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHSK+ GA TL
Sbjct: 789 ILTGWGKHSKVAGASTL 805
>ref|XP_020581196.1| pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Phalaenopsis equestris]
Length = 845
Score = 49.7 bits (117), Expect(2) = 7e-06
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +1
Query: 70 VEDMLKSI*ATF*LQL*RFNFDRFVSPRSVIATWLRDYSTISILLLRDERIQIARP 237
+E +L SI A F ++ +FN RFVS ++ A WL++ T++ILLLRDER Q + P
Sbjct: 780 IETLLDSIGAPFHME--QFNIGRFVSTGAIAAAWLKESGTVTILLLRDERSQPSSP 833
Score = 27.7 bits (60), Expect(2) = 7e-06
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 9 ILTGLGKHSKIVGACTL 59
ILTG GKHSK+ GA L
Sbjct: 760 ILTGWGKHSKVTGASPL 776