BLASTX nr result

ID: Ophiopogon24_contig00013524 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00013524
         (652 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK81858.1| uncharacterized protein A4U43_C01F33590 [Asparagu...    61   1e-07
ref|XP_020266034.1| protein WVD2-like 4 [Asparagus officinalis]        61   2e-07

>gb|ONK81858.1| uncharacterized protein A4U43_C01F33590 [Asparagus officinalis]
          Length = 256

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
 Frame = +3

Query: 6   KPLSSKPKVLNQKQKTNKPKGEG-NNKSREEDPLTETSAKREADSLGRATEG-KESIPNS 179
           KPLSSKPKV NQKQKT KP+ EG ++K+  ED L + +A+ EA S  RA EG  E++ NS
Sbjct: 173 KPLSSKPKVSNQKQKTGKPRVEGISDKTTNEDMLPKETARNEAHSSERAVEGHTEAVLNS 232

Query: 180 AD 185
           A+
Sbjct: 233 AE 234


>ref|XP_020266034.1| protein WVD2-like 4 [Asparagus officinalis]
          Length = 462

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
 Frame = +3

Query: 6   KPLSSKPKVLNQKQKTNKPKGEG-NNKSREEDPLTETSAKREADSLGRATEG-KESIPNS 179
           KPLSSKPKV NQKQKT KP+ EG ++K+  ED L + +A+ EA S  RA EG  E++ NS
Sbjct: 379 KPLSSKPKVSNQKQKTGKPRVEGISDKTTNEDMLPKETARNEAHSSERAVEGHTEAVLNS 438

Query: 180 AD 185
           A+
Sbjct: 439 AE 440


Top