BLASTX nr result
ID: Ophiopogon24_contig00013517
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00013517
(384 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020251662.1| protein CROWDED NUCLEI 1-like isoform X2 [As... 122 7e-30
ref|XP_020251661.1| protein CROWDED NUCLEI 1-like isoform X1 [As... 122 7e-30
gb|ONK81360.1| uncharacterized protein A4U43_C01F28220 [Asparagu... 122 7e-30
ref|XP_019710051.1| PREDICTED: protein CROWDED NUCLEI 1 [Elaeis ... 64 4e-09
ref|XP_008782406.1| PREDICTED: protein CROWDED NUCLEI 1-like [Ph... 62 1e-08
gb|PKU80740.1| Putative nuclear matrix constituent protein 1-lik... 60 9e-08
ref|XP_020694317.1| protein CROWDED NUCLEI 1 [Dendrobium catenatum] 60 9e-08
gb|APB87917.1| nuclear matrix constituent protein 1-like protein... 55 5e-06
ref|XP_020686738.1| protein CROWDED NUCLEI 1-like isoform X2 [De... 55 5e-06
ref|XP_020686736.1| protein CROWDED NUCLEI 1-like isoform X1 [De... 55 5e-06
gb|PKU64287.1| Putative nuclear matrix constituent protein 1-lik... 55 5e-06
>ref|XP_020251662.1| protein CROWDED NUCLEI 1-like isoform X2 [Asparagus officinalis]
Length = 981
Score = 122 bits (307), Expect = 7e-30
Identities = 64/97 (65%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Frame = -3
Query: 382 EFGERLDMVASEDATDYGVANNSSDSQRVELGGDSRMDEDLERRDKAGDEPEQSLGVGDN 203
EF ERLDMVASED T++G ANNS D Q E+G D+R+ +D +R DK GDEPE SLGVGDN
Sbjct: 748 EFNERLDMVASEDVTNHGAANNSFDGQPAEIGDDARVSKDAQRLDKVGDEPEPSLGVGDN 807
Query: 202 STDIVRMSGYGVRQAEGE-PVSIYEQNEVEGSSRHPE 95
S DIVRMS Y R AEGE SI Q+E EGSSR PE
Sbjct: 808 SIDIVRMSDYDARDAEGEVATSIDGQHETEGSSRPPE 844
>ref|XP_020251661.1| protein CROWDED NUCLEI 1-like isoform X1 [Asparagus officinalis]
Length = 1133
Score = 122 bits (307), Expect = 7e-30
Identities = 64/97 (65%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Frame = -3
Query: 382 EFGERLDMVASEDATDYGVANNSSDSQRVELGGDSRMDEDLERRDKAGDEPEQSLGVGDN 203
EF ERLDMVASED T++G ANNS D Q E+G D+R+ +D +R DK GDEPE SLGVGDN
Sbjct: 748 EFNERLDMVASEDVTNHGAANNSFDGQPAEIGDDARVSKDAQRLDKVGDEPEPSLGVGDN 807
Query: 202 STDIVRMSGYGVRQAEGE-PVSIYEQNEVEGSSRHPE 95
S DIVRMS Y R AEGE SI Q+E EGSSR PE
Sbjct: 808 SIDIVRMSDYDARDAEGEVATSIDGQHETEGSSRPPE 844
>gb|ONK81360.1| uncharacterized protein A4U43_C01F28220 [Asparagus officinalis]
Length = 1230
Score = 122 bits (307), Expect = 7e-30
Identities = 64/97 (65%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Frame = -3
Query: 382 EFGERLDMVASEDATDYGVANNSSDSQRVELGGDSRMDEDLERRDKAGDEPEQSLGVGDN 203
EF ERLDMVASED T++G ANNS D Q E+G D+R+ +D +R DK GDEPE SLGVGDN
Sbjct: 845 EFNERLDMVASEDVTNHGAANNSFDGQPAEIGDDARVSKDAQRLDKVGDEPEPSLGVGDN 904
Query: 202 STDIVRMSGYGVRQAEGE-PVSIYEQNEVEGSSRHPE 95
S DIVRMS Y R AEGE SI Q+E EGSSR PE
Sbjct: 905 SIDIVRMSDYDARDAEGEVATSIDGQHETEGSSRPPE 941
>ref|XP_019710051.1| PREDICTED: protein CROWDED NUCLEI 1 [Elaeis guineensis]
Length = 1263
Score = 63.5 bits (153), Expect = 4e-09
Identities = 53/137 (38%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Frame = -3
Query: 379 FGERLDMVASEDATDYG------VANNSSDSQRVELGGDSRMDEDLERRDKAGDEPEQSL 218
FG RLD ASE +Y V N++ D+QRV+ R +E+ ER +AGD PE S
Sbjct: 868 FGARLDGEASEGEANYEPGPSYVVGNDTIDAQRVQSDSGVRENEESERLVEAGDGPEPSF 927
Query: 217 GVGDNSTDIVRMSGYGVRQAEGEPV--SIYEQNEVEGSSRHPE---XXXXXXXXXXXXXX 53
G+ DNSTDI Q E E + I E+NE E SS PE
Sbjct: 928 GIADNSTDI---------QVESEQIIPPIDERNEREESSLPPENEFQPEPLKQRRRLPNR 978
Query: 52 XXXPTPVKRTRSVKVVV 2
P +RTRSVK VV
Sbjct: 979 KGRPKATRRTRSVKAVV 995
>ref|XP_008782406.1| PREDICTED: protein CROWDED NUCLEI 1-like [Phoenix dactylifera]
Length = 1132
Score = 62.0 bits (149), Expect = 1e-08
Identities = 51/137 (37%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Frame = -3
Query: 379 FGERLDMVASEDATDY------GVANNSSDSQRVELGGDSRMDEDLERRDKAGDEPEQSL 218
FG RLD ASE +Y GV N+ D+Q V+ R +E+ ER + GD PE S
Sbjct: 868 FGARLDGEASEGEANYEPGPSYGVGNDFIDAQGVQSDSGVRGNEESERLVEVGDGPEPSF 927
Query: 217 GVGDNSTDIVRMSGYGVRQAEGEPVS--IYEQNEVEGSSRHPE---XXXXXXXXXXXXXX 53
G+ DNSTDI Q EGE ++ + E+NE E SS E
Sbjct: 928 GIADNSTDI---------QVEGEQITAPVDERNEREESSMPTENDLQPEPSKQRRRLPGR 978
Query: 52 XXXPTPVKRTRSVKVVV 2
P ++RTRSVK VV
Sbjct: 979 KGRPKAIRRTRSVKAVV 995
>gb|PKU80740.1| Putative nuclear matrix constituent protein 1-like protein
[Dendrobium catenatum]
Length = 995
Score = 59.7 bits (143), Expect = 9e-08
Identities = 49/133 (36%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Frame = -3
Query: 379 FGERLDMVASEDATDYGVA--NNSSDSQRVELGGDSRMDEDLERRDKAGDEPEQSLGVGD 206
FGERL+ A EDA DY A N S +V RM + +R K GDE E S GV D
Sbjct: 766 FGERLNRAALEDA-DYEPAPSGNHSFGNQVHFDCGDRMSGEPDRVHKTGDEVESSFGVAD 824
Query: 205 NSTDIVRMSGYGVRQAEGEPVSIYEQN-EVEGSSRHPEXXXXXXXXXXXXXXXXXPTP-- 35
+S DIVR+ + V I ++N E++GSS H E
Sbjct: 825 SSNDIVRIDTDKAKATRKTVVVIDDENDEMQGSSIHVENDSQTDLTKQVQRHKPNRRAKP 884
Query: 34 --VKRTRSVKVVV 2
++RTRSVK VV
Sbjct: 885 NLIRRTRSVKAVV 897
>ref|XP_020694317.1| protein CROWDED NUCLEI 1 [Dendrobium catenatum]
Length = 1134
Score = 59.7 bits (143), Expect = 9e-08
Identities = 49/133 (36%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Frame = -3
Query: 379 FGERLDMVASEDATDYGVA--NNSSDSQRVELGGDSRMDEDLERRDKAGDEPEQSLGVGD 206
FGERL+ A EDA DY A N S +V RM + +R K GDE E S GV D
Sbjct: 757 FGERLNRAALEDA-DYEPAPSGNHSFGNQVHFDCGDRMSGEPDRVHKTGDEVESSFGVAD 815
Query: 205 NSTDIVRMSGYGVRQAEGEPVSIYEQN-EVEGSSRHPEXXXXXXXXXXXXXXXXXPTP-- 35
+S DIVR+ + V I ++N E++GSS H E
Sbjct: 816 SSNDIVRIDTDKAKATRKTVVVIDDENDEMQGSSIHVENDSQTDLTKQVQRHKPNRRAKP 875
Query: 34 --VKRTRSVKVVV 2
++RTRSVK VV
Sbjct: 876 NLIRRTRSVKAVV 888
>gb|APB87917.1| nuclear matrix constituent protein 1-like protein [Dendrobium
officinale]
Length = 1066
Score = 54.7 bits (130), Expect = 5e-06
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Frame = -3
Query: 379 FGERLDMVASEDATDYGVANNSS-DSQRVELGGDSRMDEDLERRDKAGDEPEQSLGVGDN 203
FGERLD VA EDA DY A ++S ++Q + + +L R D A D+ E SL ++
Sbjct: 582 FGERLDKVAFEDA-DYEPAPSASFENQMAHVDSGDVVTGELVRVDNAEDDAEASLDGANS 640
Query: 202 STDIVRMSGYGVRQAEGEPVSIYEQNEVEGSSRHPE---XXXXXXXXXXXXXXXXXPTPV 32
S DIV++ Q + V+ NEVEGSS H E + +
Sbjct: 641 SMDIVKIDSDDGSQ-KTAAVTDGMNNEVEGSSMHAEKDLKPEPSKQGQRHQPNRRAKSAI 699
Query: 31 KRTRSVKVVV 2
+RTRSVK VV
Sbjct: 700 RRTRSVKAVV 709
>ref|XP_020686738.1| protein CROWDED NUCLEI 1-like isoform X2 [Dendrobium catenatum]
Length = 1351
Score = 54.7 bits (130), Expect = 5e-06
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Frame = -3
Query: 379 FGERLDMVASEDATDYGVANNSS-DSQRVELGGDSRMDEDLERRDKAGDEPEQSLGVGDN 203
FGERLD VA EDA DY A ++S ++Q + + +L R D A D+ E SL ++
Sbjct: 870 FGERLDKVAFEDA-DYEPAPSASFENQMAHVDSGDVVTGELVRVDNAEDDAEASLDGANS 928
Query: 202 STDIVRMSGYGVRQAEGEPVSIYEQNEVEGSSRHPE---XXXXXXXXXXXXXXXXXPTPV 32
S DIV++ Q + V+ NEVEGSS H E + +
Sbjct: 929 SMDIVKIDSDDGSQ-KTAAVTDGMNNEVEGSSMHAEKDLKPEPSKQGQRHQPNRRAKSAI 987
Query: 31 KRTRSVKVVV 2
+RTRSVK VV
Sbjct: 988 RRTRSVKAVV 997
>ref|XP_020686736.1| protein CROWDED NUCLEI 1-like isoform X1 [Dendrobium catenatum]
Length = 1354
Score = 54.7 bits (130), Expect = 5e-06
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Frame = -3
Query: 379 FGERLDMVASEDATDYGVANNSS-DSQRVELGGDSRMDEDLERRDKAGDEPEQSLGVGDN 203
FGERLD VA EDA DY A ++S ++Q + + +L R D A D+ E SL ++
Sbjct: 870 FGERLDKVAFEDA-DYEPAPSASFENQMAHVDSGDVVTGELVRVDNAEDDAEASLDGANS 928
Query: 202 STDIVRMSGYGVRQAEGEPVSIYEQNEVEGSSRHPE---XXXXXXXXXXXXXXXXXPTPV 32
S DIV++ Q + V+ NEVEGSS H E + +
Sbjct: 929 SMDIVKIDSDDGSQ-KTAAVTDGMNNEVEGSSMHAEKDLKPEPSKQGQRHQPNRRAKSAI 987
Query: 31 KRTRSVKVVV 2
+RTRSVK VV
Sbjct: 988 RRTRSVKAVV 997
>gb|PKU64287.1| Putative nuclear matrix constituent protein 1-like protein
[Dendrobium catenatum]
Length = 1369
Score = 54.7 bits (130), Expect = 5e-06
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Frame = -3
Query: 379 FGERLDMVASEDATDYGVANNSS-DSQRVELGGDSRMDEDLERRDKAGDEPEQSLGVGDN 203
FGERLD VA EDA DY A ++S ++Q + + +L R D A D+ E SL ++
Sbjct: 859 FGERLDKVAFEDA-DYEPAPSASFENQMAHVDSGDVVTGELVRVDNAEDDAEASLDGANS 917
Query: 202 STDIVRMSGYGVRQAEGEPVSIYEQNEVEGSSRHPE---XXXXXXXXXXXXXXXXXPTPV 32
S DIV++ Q + V+ NEVEGSS H E + +
Sbjct: 918 SMDIVKIDSDDGSQ-KTAAVTDGMNNEVEGSSMHAEKDLKPEPSKQGQRHQPNRRAKSAI 976
Query: 31 KRTRSVKVVV 2
+RTRSVK VV
Sbjct: 977 RRTRSVKAVV 986