BLASTX nr result
ID: Ophiopogon24_contig00013481
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00013481
(834 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As... 235 1e-97
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 230 6e-95
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 228 3e-94
ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 iso... 224 1e-93
ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 iso... 224 1e-93
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial... 226 3e-93
ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [De... 224 8e-93
gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dend... 224 8e-93
ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [An... 229 1e-92
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su... 226 1e-92
gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apos... 221 2e-92
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su... 227 1e-91
ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II su... 228 8e-89
ref|XP_016696697.1| PREDICTED: DNA-directed RNA polymerase II su... 228 8e-89
ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II su... 228 8e-89
gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium r... 228 8e-89
gb|PPD96835.1| hypothetical protein GOBAR_DD06103 [Gossypium bar... 228 8e-89
gb|PIA56727.1| hypothetical protein AQUCO_00700820v1 [Aquilegia ... 226 1e-88
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 228 2e-88
ref|XP_022751509.1| DNA-directed RNA polymerase II subunit 1 [Du... 231 5e-88
>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
Length = 1843
Score = 235 bits (599), Expect(2) = 1e-97
Identities = 112/114 (98%), Positives = 113/114 (99%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MDMRFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKV GLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVAGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 114
Score = 151 bits (381), Expect(2) = 1e-97
Identities = 77/92 (83%), Positives = 77/92 (83%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLKRIYDACKSKKKCA EPVKKSRGGCGAQQPNITIDGMKMVAEYKA
Sbjct: 133 RLKRIYDACKSKKKCAGGDDIDVQGQQDSDEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 192
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
KKKSDDPEQLPEPVERKQQLSAERVLSVLKR
Sbjct: 193 TKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 224
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 230 bits (587), Expect(2) = 6e-95
Identities = 109/114 (95%), Positives = 111/114 (97%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILA 114
Score = 146 bits (369), Expect(2) = 6e-95
Identities = 73/92 (79%), Positives = 76/92 (82%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLKRIYDACK+KKKCA EP+KKSRGGCGAQQPNITIDGMKM+AEYKA
Sbjct: 133 RLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNITIDGMKMIAEYKA 192
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
PKKKSDD EQLPEPVERKQ LSAERVLSVLKR
Sbjct: 193 PKKKSDDQEQLPEPVERKQVLSAERVLSVLKR 224
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 228 bits (581), Expect(2) = 3e-94
Identities = 108/114 (94%), Positives = 110/114 (96%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILA 114
Score = 146 bits (369), Expect(2) = 3e-94
Identities = 73/92 (79%), Positives = 76/92 (82%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLKRIYDACK+KKKCA EP+KKSRGGCGAQQPNITIDGMKM+AEYKA
Sbjct: 133 RLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNITIDGMKMIAEYKA 192
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
PKKKSDD EQLPEPVERKQ LSAERVLSVLKR
Sbjct: 193 PKKKSDDQEQLPEPVERKQVLSAERVLSVLKR 224
>ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 isoform X1 [Phalaenopsis
equestris]
Length = 1827
Score = 224 bits (571), Expect(2) = 1e-93
Identities = 106/114 (92%), Positives = 109/114 (95%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCMANMAECSGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILA 114
Score = 148 bits (374), Expect(2) = 1e-93
Identities = 76/92 (82%), Positives = 76/92 (82%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLKRIYDACKSKKKCA EPVKKSRGGCGAQQPNITIDGMKMVAEYKA
Sbjct: 133 RLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 192
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
PKKKSDD EQLPEPVERKQ LSAERVLSVLKR
Sbjct: 193 PKKKSDDQEQLPEPVERKQVLSAERVLSVLKR 224
>ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 isoform X2 [Phalaenopsis
equestris]
Length = 1827
Score = 224 bits (571), Expect(2) = 1e-93
Identities = 106/114 (92%), Positives = 109/114 (95%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCMANMAECSGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILA 114
Score = 148 bits (374), Expect(2) = 1e-93
Identities = 76/92 (82%), Positives = 76/92 (82%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLKRIYDACKSKKKCA EPVKKSRGGCGAQQPNITIDGMKMVAEYKA
Sbjct: 133 RLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 192
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
PKKKSDD EQLPEPVERKQ LSAERVLSVLKR
Sbjct: 193 PKKKSDDQEQLPEPVERKQVLSAERVLSVLKR 224
>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 226 bits (575), Expect(2) = 3e-93
Identities = 107/114 (93%), Positives = 109/114 (95%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MD RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILA 114
Score = 145 bits (367), Expect(2) = 3e-93
Identities = 73/92 (79%), Positives = 76/92 (82%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLKRIYDACK+KKKCA EP+KKSRGGCGAQQPNITIDGMKM+AEYKA
Sbjct: 133 RLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNITIDGMKMIAEYKA 192
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
PKKKSDD EQLPEPVERKQ LSAERVLSVLKR
Sbjct: 193 PKKKSDDQEQLPEPVERKQVLSAERVLSVLKR 224
>ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [Dendrobium catenatum]
Length = 1841
Score = 224 bits (571), Expect(2) = 8e-93
Identities = 106/114 (92%), Positives = 109/114 (95%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETC ANMAEC GHFGHLELAKPM+HIGFMKTVLAIMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCMANMAECSGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILA 114
Score = 145 bits (367), Expect(2) = 8e-93
Identities = 73/92 (79%), Positives = 76/92 (82%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLKRIYDACKSKKKCA EP+KKSRGGCGAQQPNIT+DGMKMVAEYKA
Sbjct: 133 RLKRIYDACKSKKKCAGGDDIDLQGQQDSEEPIKKSRGGCGAQQPNITVDGMKMVAEYKA 192
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
PKKKS+D EQLPEPVERKQ LSAERVLSVLKR
Sbjct: 193 PKKKSEDQEQLPEPVERKQILSAERVLSVLKR 224
>gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
Length = 1516
Score = 224 bits (571), Expect(2) = 8e-93
Identities = 106/114 (92%), Positives = 109/114 (95%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 44 MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 103
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETC ANMAEC GHFGHLELAKPM+HIGFMKTVLAIMRCVCFNCSKILA
Sbjct: 104 DRKMKCETCMANMAECSGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILA 157
Score = 145 bits (367), Expect(2) = 8e-93
Identities = 73/92 (79%), Positives = 76/92 (82%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLKRIYDACKSKKKCA EP+KKSRGGCGAQQPNIT+DGMKMVAEYKA
Sbjct: 195 RLKRIYDACKSKKKCAGGDDIDLQGQQDSEEPIKKSRGGCGAQQPNITVDGMKMVAEYKA 254
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
PKKKS+D EQLPEPVERKQ LSAERVLSVLKR
Sbjct: 255 PKKKSEDQEQLPEPVERKQILSAERVLSVLKR 286
>ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [Ananas comosus]
gb|OAY68410.1| DNA-directed RNA polymerase II subunit rpb1 [Ananas comosus]
Length = 1854
Score = 229 bits (583), Expect(2) = 1e-92
Identities = 108/114 (94%), Positives = 111/114 (97%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MDMRFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILA 114
Score = 140 bits (354), Expect(2) = 1e-92
Identities = 71/92 (77%), Positives = 75/92 (81%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLKRIYDACKSKK+CA EPVKKSRGGCGAQQPNIT+DGMKMVAE+KA
Sbjct: 133 RLKRIYDACKSKKRCAGGDDIDVQGQQDTDEPVKKSRGGCGAQQPNITVDGMKMVAEFKA 192
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
KKKSDD EQLPEPVERKQ LSAERVL+VLKR
Sbjct: 193 SKKKSDDQEQLPEPVERKQILSAERVLNVLKR 224
>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
subsp. malaccensis]
Length = 1832
Score = 226 bits (577), Expect(2) = 1e-92
Identities = 107/114 (93%), Positives = 110/114 (96%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MD RFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQ+EHGETMERGKPK GLSDPRLGTI
Sbjct: 1 MDTRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPAGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILA 114
Score = 142 bits (359), Expect(2) = 1e-92
Identities = 72/92 (78%), Positives = 75/92 (81%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLKRIYDACKSKKKC+ EP+KKSRGGCGAQQPNITIDGMKMVAEYKA
Sbjct: 133 RLKRIYDACKSKKKCSGGDDIDVQGQQDSEEPMKKSRGGCGAQQPNITIDGMKMVAEYKA 192
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
PKKKSD+ EQLPEP ERKQ LSAERVLSVLKR
Sbjct: 193 PKKKSDEQEQLPEPAERKQILSAERVLSVLKR 224
>gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apostasia shenzhenica]
Length = 1806
Score = 221 bits (564), Expect(2) = 2e-92
Identities = 104/114 (91%), Positives = 108/114 (94%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
M+ RF YSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 METRFAYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKAGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILA 114
Score = 147 bits (370), Expect(2) = 2e-92
Identities = 74/92 (80%), Positives = 76/92 (82%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RL+RIYDACKSKKKCA EP+KKSRGGCGAQQPNITIDGMKMVAEYKA
Sbjct: 133 RLRRIYDACKSKKKCAGGDDIDVQGQQDSEEPIKKSRGGCGAQQPNITIDGMKMVAEYKA 192
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
PKKKSDD EQLPEPVERKQ LSAERVLSVLKR
Sbjct: 193 PKKKSDDQEQLPEPVERKQVLSAERVLSVLKR 224
>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 227 bits (579), Expect(2) = 1e-91
Identities = 107/114 (93%), Positives = 110/114 (96%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDVRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILA 114
Score = 138 bits (348), Expect(2) = 1e-91
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLKRI DACKSKKKCA EP+KKSRGGCG+QQP ITIDGMKMVAEYKA
Sbjct: 133 RLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTITIDGMKMVAEYKA 192
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
PKKKSDD +QLPEPVERKQ LSA+RVLSVLKR
Sbjct: 193 PKKKSDDQDQLPEPVERKQILSADRVLSVLKR 224
>ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii]
ref|XP_012491468.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii]
ref|XP_012491470.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii]
ref|XP_012491471.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii]
gb|KJB43255.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
gb|KJB43256.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
gb|KJB43258.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
Length = 1846
Score = 228 bits (582), Expect(2) = 8e-89
Identities = 107/114 (93%), Positives = 111/114 (97%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILA
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILA 114
Score = 128 bits (321), Expect(2) = 8e-89
Identities = 65/92 (70%), Positives = 72/92 (78%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLK+I DACK+K KC EPVKKSRGGCGAQQP +TIDGMKM+AEYKA
Sbjct: 133 RLKKILDACKNKTKCEGGDEIDVQGQDAE-EPVKKSRGGCGAQQPKLTIDGMKMIAEYKA 191
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
+KK+DDPEQLPEPVERKQ L+AERVLSVLKR
Sbjct: 192 QRKKNDDPEQLPEPVERKQTLTAERVLSVLKR 223
>ref|XP_016696697.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Gossypium
hirsutum]
Length = 1839
Score = 228 bits (582), Expect(2) = 8e-89
Identities = 107/114 (93%), Positives = 111/114 (97%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILA
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILA 114
Score = 128 bits (321), Expect(2) = 8e-89
Identities = 65/92 (70%), Positives = 72/92 (78%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLK+I DACK+K KC EPVKKSRGGCGAQQP +TIDGMKM+AEYKA
Sbjct: 133 RLKKILDACKNKTKCEGGDEIDVQGQDVE-EPVKKSRGGCGAQQPKLTIDGMKMIAEYKA 191
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
+KK+DDPEQLPEPVERKQ L+AERVLSVLKR
Sbjct: 192 QRKKNDDPEQLPEPVERKQTLTAERVLSVLKR 223
>ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
[Gossypium raimondii]
Length = 1832
Score = 228 bits (582), Expect(2) = 8e-89
Identities = 107/114 (93%), Positives = 111/114 (97%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILA
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILA 114
Score = 128 bits (321), Expect(2) = 8e-89
Identities = 65/92 (70%), Positives = 72/92 (78%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLK+I DACK+K KC EPVKKSRGGCGAQQP +TIDGMKM+AEYKA
Sbjct: 133 RLKKILDACKNKTKCEGGDEIDVQGQDAE-EPVKKSRGGCGAQQPKLTIDGMKMIAEYKA 191
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
+KK+DDPEQLPEPVERKQ L+AERVLSVLKR
Sbjct: 192 QRKKNDDPEQLPEPVERKQTLTAERVLSVLKR 223
>gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
Length = 1809
Score = 228 bits (582), Expect(2) = 8e-89
Identities = 107/114 (93%), Positives = 111/114 (97%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILA
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILA 114
Score = 128 bits (321), Expect(2) = 8e-89
Identities = 65/92 (70%), Positives = 72/92 (78%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLK+I DACK+K KC EPVKKSRGGCGAQQP +TIDGMKM+AEYKA
Sbjct: 133 RLKKILDACKNKTKCEGGDEIDVQGQDAE-EPVKKSRGGCGAQQPKLTIDGMKMIAEYKA 191
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
+KK+DDPEQLPEPVERKQ L+AERVLSVLKR
Sbjct: 192 QRKKNDDPEQLPEPVERKQTLTAERVLSVLKR 223
>gb|PPD96835.1| hypothetical protein GOBAR_DD06103 [Gossypium barbadense]
Length = 1792
Score = 228 bits (582), Expect(2) = 8e-89
Identities = 107/114 (93%), Positives = 111/114 (97%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRK+KCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILA
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILA 114
Score = 128 bits (321), Expect(2) = 8e-89
Identities = 65/92 (70%), Positives = 72/92 (78%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLK+I DACK+K KC EPVKKSRGGCGAQQP +TIDGMKM+AEYKA
Sbjct: 133 RLKKILDACKNKTKCEGGDEIDVQGQDAE-EPVKKSRGGCGAQQPKLTIDGMKMIAEYKA 191
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
+KK+DDPEQLPEPVERKQ L+AERVLSVLKR
Sbjct: 192 QRKKNDDPEQLPEPVERKQTLTAERVLSVLKR 223
>gb|PIA56727.1| hypothetical protein AQUCO_00700820v1 [Aquilegia coerulea]
Length = 1802
Score = 226 bits (577), Expect(2) = 1e-88
Identities = 107/114 (93%), Positives = 110/114 (96%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MDMRFP+SPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILA 114
Score = 129 bits (324), Expect(2) = 1e-88
Identities = 67/92 (72%), Positives = 72/92 (78%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLK++ DACK+K KC EPVKKSRGGCGAQQP ITIDGMKMVAEYKA
Sbjct: 133 RLKKVLDACKNKTKC-DGGDDIETQGQELDEPVKKSRGGCGAQQPKITIDGMKMVAEYKA 191
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
+KKSDD EQLPEPVERKQQLSAE+VLSVLKR
Sbjct: 192 QRKKSDDQEQLPEPVERKQQLSAEKVLSVLKR 223
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis
vinifera]
Length = 1848
Score = 228 bits (581), Expect(2) = 2e-88
Identities = 108/114 (94%), Positives = 110/114 (96%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ET ERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILA 114
Score = 127 bits (319), Expect(2) = 2e-88
Identities = 64/92 (69%), Positives = 72/92 (78%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLK+I DACK+K KC EPVKKSRGGCGAQQP +TI+GMKM+AEYK
Sbjct: 133 RLKKILDACKNKSKCEGGDEIETQALDSD-EPVKKSRGGCGAQQPKLTIEGMKMIAEYKI 191
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
+KK+DDPEQLPEPVERKQQLSAERVL+VLKR
Sbjct: 192 QRKKNDDPEQLPEPVERKQQLSAERVLNVLKR 223
>ref|XP_022751509.1| DNA-directed RNA polymerase II subunit 1 [Durio zibethinus]
Length = 1859
Score = 231 bits (590), Expect(2) = 5e-88
Identities = 109/114 (95%), Positives = 112/114 (98%)
Frame = +1
Query: 166 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 345
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 346 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILA 507
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILA
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILA 114
Score = 122 bits (306), Expect(2) = 5e-88
Identities = 62/92 (67%), Positives = 71/92 (77%)
Frame = +2
Query: 557 RLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNITIDGMKMVAEYKA 736
RLK+I DACK+K KC EPVKKSRGGCGAQQP ++IDGMKM+AEYKA
Sbjct: 133 RLKKILDACKNKTKCEGGDEIDVQGQDTE-EPVKKSRGGCGAQQPKLSIDGMKMIAEYKA 191
Query: 737 PKKKSDDPEQLPEPVERKQQLSAERVLSVLKR 832
+K++DD EQLPEPVERKQ L+AERVLSVLKR
Sbjct: 192 QRKRNDDQEQLPEPVERKQTLTAERVLSVLKR 223