BLASTX nr result

ID: Ophiopogon24_contig00013301 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00013301
         (462 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU35358.1| hypothetical protein TSUD_337500 [Trifolium subt...    58   5e-07

>dbj|GAU35358.1| hypothetical protein TSUD_337500 [Trifolium subterraneum]
          Length = 317

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 38/91 (41%), Positives = 43/91 (47%)
 Frame = +2

Query: 188 AQPGGLW*EGALGVDWWPFSQKLIGDFGDSFCSVNACFIGNGNNHKVNWCLVHLLMGEV* 367
           A+PGGLW EG  G      +  L  DFGDSFC+V ACF G GNNHK+             
Sbjct: 53  AKPGGLWWEGGHGGIGG--NSYLSVDFGDSFCNVIACFYGIGNNHKL------------- 97

Query: 368 FPSVLKS*WPYSFCNNFRRVRDVDMKHDFAF 460
                              VRDVDMKHD+AF
Sbjct: 98  ------------------VVRDVDMKHDYAF 110


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